CV884859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_SUBDO (40S ribosomal protein S3a OS=Suberites domuncula PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.820e-76 Identity = 141/226 (62.39%), Postives = 176/226 (77.88%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGV--KMERPADEPI 755 DWYD+KAPS F VRN+GKTLVTRTQG K+AS+GLK RVFEVSL DL N+E+ ++RK RL +ED+QGKNVLTNF GM TTDKLR+LV+KW TLIEA VDVKTTD Y LR+FCIGFTKR PNQ+K+T YA++SQ R IR+KM ++M + + DLK V K I + IG++IEK SIYPL +VF+RKVK+LK PKFD+G+LM++HG+ + G E P E + Sbjct: 28 DWYDVKAPSMFAVRNIGKTLVTRTQGKKLASDGLKGRVFEVSLADLQNDEQ-SFRKFRLISEDIQGKNVLTNFHGMTMTTDKLRALVKKWQTLIEANVDVKTTDGYLLRLFCIGFTKRQPNQIKKTSYAKSSQCRSIRKKMVDVMTREVSQIDLKETVNKLIPDSIGKDIEKKCQSIYPLHDVFVRKVKVLKKPKFDIGRLMDLHGESAGGKGATDTFEPPVQESV 252
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_NECH7 (40S ribosomal protein S1 OS=Nectria haematococca (strain 77-13-4 / FGSC 9596 / MPVI) GN=RPS1 PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.820e-76 Identity = 144/227 (63.44%), Postives = 177/227 (77.97%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKMERPADEPIPE 761 DWY IKAP+ F VR+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+RK+RLR ++VQGKN LTNF G+DFT+DKLRSLVRKW TLIEA V VKTTD+Y +R+F I FTKR PNQ+K+T YA +SQIR IRRKM +I+ +A+SC L L K I E+IGREIEK+T IYPLQNV IRKVK+LK+PKFDLG LM +HG+ ++D G K+ER E + E Sbjct: 28 DWYSIKAPNPFNVRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHAFRKVRLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLIRLFAIAFTKRRPNQIKKTTYAASSQIRAIRRKMTDIIQREASSCTLTQLTSKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALMALHGESGTDDQGQKVEREFKERVLE 254
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_PENMQ (40S ribosomal protein S1 OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) GN=rps1 PE=3 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 2.377e-76 Identity = 143/228 (62.72%), Postives = 180/228 (78.95%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKMERPADEPIPEA 764 D Y +KAPS F++R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G+DFT+DKLRSLVRKW +LIEA V VKTTD+Y LR+F I FTKR PNQ+K+T YA +SQIR IR+KM EI+ +AASC L L K I E+IGREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ ++D G K+ER E + E+ Sbjct: 28 DEYSVKAPSTFQIRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYAGSSQIRAIRKKMTEIIQREAASCTLSQLTTKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALLNLHGESTTDDQGHKVEREFKETVLES 255
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_SCLS1 (40S ribosomal protein S1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rps1 PE=3 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 3.105e-76 Identity = 142/227 (62.56%), Postives = 177/227 (77.97%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKMERPADEPIPE 761 DWY IKAPS F++R+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+RK++LR ++VQGKN LTNF G+DFT+DKLRSLVRKW +LIEA + VKTTD+Y LR+F I FTKR PNQ+K+T YA +SQIR IR+KM EI+ +A++C L L K I E+IGREIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ + D G K+ER E + E Sbjct: 28 DWYQIKAPSSFQIRDVGKTLVNRTTGLKNANDSLKGRIIEVSLADLQKDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANITVKTTDDYLLRLFAIAFTKRRPNQIKKTTYAASSQIRAIRKKMTEIIQREASTCTLTQLTAKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESNTDEQGQKVEREFKEKVLE 254
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_HUMAN (40S ribosomal protein S3a OS=Homo sapiens GN=RPS3A PE=1 SV=2) HSP 1 Score: 285.419 bits (729), Expect = 3.105e-76 Identity = 141/225 (62.67%), Postives = 177/225 (78.67%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKMER 737 DWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN LTNF GMD T DK+ S+V+KW T+IEA+VDVKTTD Y LR+FC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G K+ER Sbjct: 29 DWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 252
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_FELCA (40S ribosomal protein S3a (Fragment) OS=Felis catus GN=RPS3A PE=2 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 3.105e-76 Identity = 141/225 (62.67%), Postives = 177/225 (78.67%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKMER 737 DWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN LTNF GMD T DK+ S+V+KW T+IEA+VDVKTTD Y LR+FC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G K+ER Sbjct: 25 DWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 248
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_BOVIN (40S ribosomal protein S3a OS=Bos taurus GN=RPS3A PE=2 SV=3) HSP 1 Score: 285.419 bits (729), Expect = 3.105e-76 Identity = 141/225 (62.67%), Postives = 177/225 (78.67%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKMER 737 DWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN LTNF GMD T DK+ S+V+KW T+IEA+VDVKTTD Y LR+FC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G K+ER Sbjct: 29 DWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 252
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_PENCW (40S ribosomal protein S1 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=rps1 PE=3 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 4.055e-76 Identity = 140/228 (61.40%), Postives = 180/228 (78.95%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKMERPADEPIPEA 764 D Y +KAPS F+ R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+RK++LR +++QGKN LTNF G+DFTTDKLRSLVRKW +LIEA + VKTTD+Y LR+F I FTKR PNQ+K+T YA++SQIR IR+KM EI+ +A++C L L K I E+IGREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ ++D G K+ER E + E+ Sbjct: 28 DEYSVKAPSTFQTRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANITVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKMTEIIQREASTCTLSQLTHKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESATDDKGQKVEREFKETVLES 255
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_BOTFB (40S ribosomal protein S1 OS=Botryotinia fuckeliana (strain B05.10) GN=rps1 PE=3 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 4.055e-76 Identity = 142/227 (62.56%), Postives = 177/227 (77.97%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKMERPADEPIPE 761 DWY IKAPS F++R+VGKTLV RT G K A++ LK R+ EVSL DL +E+HA+RK++LR ++VQGKN LTNF G+DFT+DKLRSLVRKW +LIEA + VKTTD+Y LR+F I FTKR PNQ+K+T YA +SQIR IR+KM EI+ +A++C L L K I E+IGREIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ + D G K+ER E + E Sbjct: 28 DWYQIKAPSSFQIRDVGKTLVNRTTGLKNANDSLKGRIVEVSLADLQKDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANITVKTTDDYLLRLFAIAFTKRRPNQIKKTTYAASSQIRAIRKKMTEIIQREASTCTLTQLTAKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESNTDEQGQKVEREFKEKVLE 254
BLAST of CV884859 vs. ExPASy Swiss-Prot
Match: RS3A_RAT (40S ribosomal protein S3a OS=Rattus norvegicus GN=Rps3a PE=1 SV=2) HSP 1 Score: 284.263 bits (726), Expect = 6.916e-76 Identity = 140/225 (62.22%), Postives = 176/225 (78.22%), Query Frame = 3 Query: 84 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKMER 737 DWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN LTNF GMD T DK+ S+V+KW T+IEA+VDVKTTD Y LR+FC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ ++ G K+ER Sbjct: 29 DWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVER 252 The following BLAST results are available for this feature:
BLAST of CV884859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 201
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884859 ID=CV884859; Name=CV884859; organism=Citrus sinensis; type=EST; length=931bpback to top |