CV884858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A2_VITVI (40S ribosomal protein S3a-2 OS=Vitis vinifera GN=GSVIVT00031140001 PE=3 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 1.870e-74 Identity = 140/161 (86.96%), Postives = 147/161 (91.30%), Query Frame = -2 Query: 344 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLME 826 L DL N+E+HAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKW TLIEA+VDVKTTDNYTLRMFCI FTK+ NQ K+T YAQ+SQIRQIRRKMREIM QAASCDLK LV KFI E+IGREIEKAT SIYPLQNVFIRKVKILKAPKFDLGKLME Sbjct: 70 LADLQNDEDHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKKRQNQNKKTSYAQSSQIRQIRRKMREIMTTQAASCDLKELVRKFIPEMIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 230
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_CHLRE (40S ribosomal protein S3a OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_168484 PE=3 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.340e-72 Identity = 131/178 (73.60%), Postives = 151/178 (84.83%), Query Frame = -2 Query: 293 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPA 826 L DL E+ A+RK+RLR EDVQG+N LTNFWGMDFTTDKLRSLVRKW TLIEA+VDVKTTD YTLR+FCI FTK+ Q+KRTCYAQ++QIRQIR+KM EI+ +A SCDLK LV KFI E IG++IEK+ IYPLQN FIRKVK+LKAPKFD+ KLMEVHGDYSE+VG K+ERPA Sbjct: 70 LADLQKNEDDAFRKMRLRVEDVQGRNCLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDGYTLRVFCISFTKKRQGQIKRTCYAQSAQIRQIRKKMMEIITREATSCDLKELVAKFIPESIGKDIEKSCQGIYPLQNTFIRKVKVLKAPKFDITKLMEVHGDYSEEVGAKIERPA 247
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_OSTLU (40S ribosomal protein S3a OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_28528 PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 4.461e-68 Identity = 128/185 (69.19%), Postives = 153/185 (82.70%), Query Frame = -2 Query: 275 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPE 826 L DL+N+E+ ++RK++L+ EDVQGKNVLTNF GMDFTTDK+RSLVRKW +LIE +VDVKTTD YTLR+FCIGFTKR +Q KRTCYAQ++QIR+IR KM EI+ + +CDLK LV KFI E+IG+EIEK+ IYPLQNV+IRKVKILKAPKFDL KLMEVHGDYS E VG + RP +E E Sbjct: 70 LADLNNDEDQSFRKMKLKCEDVQGKNVLTNFAGMDFTTDKIRSLVRKWFSLIECFVDVKTTDGYTLRVFCIGFTKRRMDQAKRTCYAQSAQIRKIRAKMVEIITRECTTCDLKELVLKFIPEVIGKEIEKSCAGIYPLQNVYIRKVKILKAPKFDLTKLMEVHGDYSGEAVGEAVARPVEEKAEE 254
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_LENED (40S ribosomal protein S1 OS=Lentinula edodes GN=RPS1 PE=2 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.695e-67 Identity = 122/181 (67.40%), Postives = 152/181 (83.98%), Query Frame = -2 Query: 284 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEP 826 LGDL+ EEE ++RKI+LR ++VQGKN LTNF GMDFT+DKLRSLVRKW TLIEA+VDVKTTD Y LR+F IGFTKR P QV++T YAQ+SQ+R+IR+KM EIM +A +CDLK LV+KF+ E IGREIEKA+ SIYPLQNV++RK KILKAPKFD+ KLME+HG+ +++ G K+ + EP Sbjct: 70 LGDLNKEEEQSFRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIGFTKRRPTQVRKTTYAQSSQVREIRKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKASRSIYPLQNVYVRKAKILKAPKFDVSKLMELHGESTDETGTKIAKDFKEP 250
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_TORRU (40S ribosomal protein S3a OS=Tortula ruralis GN=RPS3A PE=2 SV=3) HSP 1 Score: 249.98 bits (637), Expect = 1.215e-65 Identity = 126/175 (72.00%), Postives = 149/175 (85.14%), Query Frame = -2 Query: 305 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEK-ATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKM 826 L DL N+E+ A+RKI+LRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKW +LI+A+VDVKTTDNY +R+FCI FTK+ PN R YAQ+SQI IRRKMREIM+ +A +CDLK LV KFI E+IG+EI++ + IYPLQ+ FIRKVKILKAPKFDL KLMEVHGDY+E+VG K+ Sbjct: 69 LADLQNDEDQAFRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHVDVKTTDNYQIRIFCIAFTKKRPNHT-RNFYAQSSQI-AIRRKMREIMVKEAQTCDLKELVAKFIPEVIGKEIDEWRSQGIYPLQSTFIRKVKILKAPKFDLMKLMEVHGDYNEEVGAKI 241
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_POSPM (40S ribosomal protein S1 OS=Postia placenta (strain ATCC 44394 / Madison 698-R) GN=RPS1 PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.215e-65 Identity = 121/181 (66.85%), Postives = 149/181 (82.32%), Query Frame = -2 Query: 284 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEP 826 L DL+N+EE A+RKI+LR ++VQGKN LTNF GM F++DKLRSLVRKW TLIEA+VDVKTTD Y LR+F IGFTKR P QV++T YAQ+SQIRQIR+KM EIM +A+SCDLK LV+KFI E IGREIEKA IYPLQNVF+ K KILKAPKFD+ KL+E+HG+ +++ G ++ + EP Sbjct: 70 LADLNNDEEQAFRKIKLRIDEVQGKNCLTNFHGMSFSSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIGFTKRRPTQVRKTTYAQSSQIRQIRQKMFEIMTREASSCDLKELVQKFIPEAIGREIEKAARGIYPLQNVFVHKAKILKAPKFDMSKLLELHGESTDETGTRVVKDFKEP 250
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_LACBS (40S ribosomal protein S1 OS=Laccaria bicolor (strain S238N-H82) GN=RPS1 PE=3 SV=2) HSP 1 Score: 249.98 bits (637), Expect = 1.215e-65 Identity = 116/181 (64.09%), Postives = 151/181 (83.43%), Query Frame = -2 Query: 284 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEP 826 L DL+ +EE ++RKI+LR +++QGKN LTNF GMDFT+DKLRSLVRKW TL+EA+VDVKTTD Y LR+F IGFTKR P+QV++T YAQ+SQ+R+IR+KM EIM +A +CDLK LV+KF+ E IGREIEKA SIYPLQNV++RK KILK+PKFD+ KL+E+HGD +++ G ++ + EP Sbjct: 70 LADLNKDEEQSFRKIKLRIDEIQGKNCLTNFHGMDFTSDKLRSLVRKWQTLVEAHVDVKTTDGYLLRLFAIGFTKRRPSQVRKTTYAQSSQVREIRKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKAARSIYPLQNVYVRKAKILKSPKFDMSKLLELHGDSTDETGTRIAKDFKEP 250
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_COPC7 (40S ribosomal protein S1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPS1 PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 4.616e-65 Identity = 116/181 (64.09%), Postives = 150/181 (82.87%), Query Frame = -2 Query: 284 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEP 826 L DL+ +EE ++RKI+LR +++QG+N LTNF GMDFT+DKLRSLVRKW TL+EA+VDVKTTD Y LR+F IGFTKR P QVK+T YAQ +Q+R++R+KM EI+ +A SCDLK LV+KF+ E IGREIEKA+ SIYPLQNV+IRK KILKAPKFD+ KL+E+HGD +++ G ++ + EP Sbjct: 70 LADLNKDEEQSFRKIKLRVDEIQGRNCLTNFHGMDFTSDKLRSLVRKWQTLVEAHVDVKTTDGYLLRLFAIGFTKRRPTQVKKTTYAQTAQVRELRKKMFEIITREATSCDLKELVQKFVPEAIGREIEKASRSIYPLQNVYIRKAKILKAPKFDVSKLLELHGDSTDESGTRVTKDFKEP 250
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_PYRTR (40S ribosomal protein S1 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=rps1 PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.533e-63 Identity = 122/185 (65.95%), Postives = 147/185 (79.46%), Query Frame = -2 Query: 275 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPE 826 L DL +E+HA+RK++LR ++VQGKN LTNF G+DFT+DKLRSLVRKW TLIEA V VKTTD+Y LR+FCI FTKR PNQVK+T YAQ+SQIR IR+KM EIM A+SC L L +K I E+IGREIEKAT IYPLQNV +RKVK+LKAPKFDLG L+ +HG+ S +D G K+ER E + E Sbjct: 69 LADLQKDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVVVKTTDDYLLRLFCIAFTKRRPNQVKKTTYAQSSQIRAIRKKMVEIMARDASSCTLAQLTQKLIPEVIGREIEKATQGIYPLQNVHVRKVKLLKAPKFDLGALLGLHGESSQDDSGQKVEREFKETVLE 253
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_ASPCL (40S ribosomal protein S1 OS=Aspergillus clavatus GN=rps1 PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 4.321e-63 Identity = 120/186 (64.52%), Postives = 148/186 (79.57%), Query Frame = -2 Query: 272 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKMERPADEPIPEA 826 L DL N+E+HA+RK++LR +++QGKN LTNF G+DFTTDKLRSLVRKW +LIEA V VKTTD+Y LR+F I FTKR PNQ+K+T YA++SQIR IR+KM EIM +AASC L L K I E+IGREIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ ++D G K+ER E + E+ Sbjct: 70 LADLQNDEDHAFRKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKMTEIMQREAASCSLAQLTHKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESTTDDKGQKVEREFKEQVLES 255 The following BLAST results are available for this feature:
BLAST of CV884858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 181
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884858 ID=CV884858; Name=CV884858; organism=Citrus sinensis; type=EST; length=827bpback to top |