CV884858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3AB_XENLA (40S ribosomal protein S3a-B OS=Xenopus laevis GN=rps3a-B PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.820e-53 Identity = 105/183 (57.38%), Postives = 137/183 (74.86%), Query Frame = -2 Query: 299 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKMER 826 L DL N+E A+RK +L EDVQGKN LTNF GMD T DK+ S+V+KW T+IEA+VDVKTTD Y LR+FC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +V+ RKVK+LK PKF+LGKLME+HG+ +++ G K+ER Sbjct: 71 LADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMSREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYARKVKMLKKPKFELGKLMELHGEGGGSGKPAADETGAKVER 252
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A1_PICST (40S ribosomal protein S1-A OS=Pichia stipitis GN=RPS1A PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.104e-53 Identity = 98/165 (59.39%), Postives = 130/165 (78.79%), Query Frame = -2 Query: 332 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 826 L DL E+H+YR ++LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT D+Y LR+F + FTKR NQVK+T YAQ+S++R++R+KM EIM + ++ L L K I E+IGREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ Sbjct: 70 LADLQGSEDHSYRNVKLRVDEVQGKNLLTNFHGLSFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFALAFTKRQANQVKKTTYAQSSKLREVRKKMSEIMQREVSAVTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKVLKQPKFDLGALLALHGE 234
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_CALJA (40S ribosomal protein S3a OS=Callithrix jacchus GN=RPS3A PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.054e-53 Identity = 105/183 (57.38%), Postives = 136/183 (74.32%), Query Frame = -2 Query: 299 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKMER 826 L D N+E A+RK +L EDVQGKN LTNF GMD T DK+ S+V+KW T+IEA+VDVKTTD Y LR+FC+GFTK+ NQ+++T YAQ Q+ QIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G K+ER Sbjct: 71 LADFQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKHNNQIRKTSYAQHQQVCQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKIPKFELGKLMELHGEGSSSGKATGDETGAKVER 252
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_VANPO (40S ribosomal protein S1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS1 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.294e-53 Identity = 106/181 (58.56%), Postives = 133/181 (73.48%), Query Frame = -2 Query: 287 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 826 L DL E+H++RKI+LR ++VQGKN+LTNF GMDFTTDK+RS+VRKW TLIEA V VKT+D+Y LR+F I FT++ NQVKRT YAQ+S IR IR+ + EI+ + L L K I E+I +EIE AT I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G K+ DE Sbjct: 70 LADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKVRSMVRKWQTLIEANVTVKTSDDYVLRVFAIAFTRKQSNQVKRTSYAQSSHIRAIRKVISEILTREVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGSLMALHGEGSGEEKGKKVSGFKDE 250
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_OPHHA (40S ribosomal protein S3a OS=Ophiophagus hannah GN=RPS3A PE=2 SV=3) HSP 1 Score: 207.994 bits (528), Expect = 5.294e-53 Identity = 103/183 (56.28%), Postives = 136/183 (74.32%), Query Frame = -2 Query: 299 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSEDVGVKMER 826 L DL N+E A+RK +L EDVQGKN L NF GMD T DK+ S+V+KW T+IEA++DVKTTD Y LR+FC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G K+ER Sbjct: 71 LADLQNDEV-AFRKFKLITEDVQGKNCLINFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCVGFTKKRTNQIRKTSYAQHQQVRQIRKKMVEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGSGKPSGDETGAKVER 252
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_CRYHO (40S ribosomal protein S3a OS=Cryptosporidium hominis GN=Chro.40360 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.914e-53 Identity = 104/176 (59.09%), Postives = 134/176 (76.14%), Query Frame = -2 Query: 305 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVH--GDYSEDVGVKM 826 L DL+N+E+ A+RKI+L+ ED+QG+ LT F GMD T DKL SL+RK+ TLIEA+ +VKT+D Y LR+FCI FT+R+ +QVK TCYAQ SQIRQIR+KM EI+ A+A L+ LV+KFI E IG+EIEKA I+PLQ+VFIRKVK+L P FD+ +LME H D E+ G K+ Sbjct: 70 LADLNNDEDQAFRKIKLQCEDIQGRTCLTEFHGMDMTRDKLCSLIRKYQTLIEAHCNVKTSDGYVLRLFCIAFTRRMADQVKSTCYAQTSQIRQIRKKMVEIITAEAEGTTLRDLVKKFIPESIGKEIEKACRHIFPLQHVFIRKVKVLSKPSFDVSRLMESHVGADGVEEKGTKV 245
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_PERAM (40S ribosomal protein S3a OS=Periplaneta americana GN=Parcxpwex01 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 9.030e-53 Identity = 106/191 (55.50%), Postives = 139/191 (72.77%), Query Frame = -2 Query: 275 LGDLHNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKMERPA--DEPIPE 826 L DL N+ E ++RK RL AEDVQG+NVLTNF GMD TTDKLRS+V+KW TLIEA VDVKTTD Y LR+FCIGFT + ++TCYAQ +Q+R IR+KM EI+ S DLK +V K + + I ++IEKA IYPL +V+IRKVK+LK P+F+L KL+E+HGD S++ G +++RP + P+ E Sbjct: 71 LADLQNDNDAERSFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVKTTDGYLLRVFCIGFTNKDQMSQRKTCYAQHTQVRAIRKKMVEIITRDVTSSDLKEVVNKLLPDSIAKDIEKACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGKGGSDEPGARVDRPEGYEPPVQE 261
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_PICPG (40S ribosomal protein S1 OS=Pichia pastoris (strain GS115) GN=RPS1 PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.540e-52 Identity = 102/175 (58.29%), Postives = 133/175 (76.00%), Query Frame = -2 Query: 305 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKM 826 L DL E+H+++KI+LR ++VQGKN+LTNF G DFT+DK+RSLVRKW +L+EA V VKT D+Y LR+FCI FT+R NQ+K+T YAQ+SQ+ IR+KM EIM + ++ L L K I E+IGREIEKA IYPLQNV IRKVK+LK KFDLG L+ +HG+ +E+ G K+ Sbjct: 70 LADLQGSEDHSFKKIKLRVDEVQGKNLLTNFHGFDFTSDKVRSLVRKWQSLVEANVTVKTADDYVLRIFCIAFTRRHQNQIKKTTYAQSSQLSAIRKKMVEIMQREVSNVTLAQLTSKLIPEVIGREIEKAAEGIYPLQNVHIRKVKVLKQAKFDLGALLALHGESVTEENGKKV 244
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_LACTC (40S ribosomal protein S1 OS=Lachancea thermotolerans (strain CBS 6340) GN=RPS1 PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.540e-52 Identity = 102/175 (58.29%), Postives = 129/175 (73.71%), Query Frame = -2 Query: 305 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKM 826 L DL E+H++RK++LR ++VQGKN+LTNF G+D TTDK RS+VRKW TLIEA V VKT D Y LR+F I FT+R PNQVK+ CYAQ+S IR IR+ + EI+ + + L L K I E+I +EIE AT I+PLQNV IRKVK+LK PKFDLG LM +HG+ S E+ G K+ Sbjct: 70 LADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGLDLTTDKYRSMVRKWQTLIEANVTVKTADEYVLRVFAIAFTRRQPNQVKKACYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGALMTLHGEASGEEKGKKV 244
BLAST of CV884858 vs. ExPASy Swiss-Prot
Match: RS3A_PLAVI (40S ribosomal protein S3a OS=Plasmodium vivax GN=PVX_095080 PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 2.012e-52 Identity = 106/195 (54.36%), Postives = 137/195 (70.26%), Query Frame = -2 Query: 242 LGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADEPIPEAPTEVIGA*IK 826 L DL+N+E+ A++KI+L + + K+ T+F G+ T DKL SL+RK +TLIE Y DVKT DNY LRMFCI FTK+ PNQ K TCYAQ SQI++IR+KM +IM A+A+ LK LV+KFI E IG+E+EK IYPLQNV IRKVKILK PK D+ KLME+H D ED G ++ P + T ++ A +K Sbjct: 70 LADLNNDEDQAHKKIKLCCDHIINKDCYTDFCGLSITRDKLCSLIRKGYTLIEGYTDVKTIDNYQLRMFCIAFTKKRPNQTKTTCYAQTSQIKKIRKKMVDIMNAEASKVMLKDLVKKFIPESIGKEVEKQCKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDSKEDAGKNVK---SLPESKEATNILSAELK 261 The following BLAST results are available for this feature:
BLAST of CV884858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 181
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884858 ID=CV884858; Name=CV884858; organism=Citrus sinensis; type=EST; length=827bpback to top |