CV884855

Overview
NameCV884855
Unique NameCV884855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSI (Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.230e-85
Identity = 155/164 (94.51%), Postives = 162/164 (98.78%), Query Frame = -2
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKLAYVALDYEQELETAKSSSSVEK+YELPDGQ+ITIGAERFRCPEV+FQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVHRKCF
Sbjct:  214 IKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377          
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSJ (Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.606e-85
Identity = 153/164 (93.29%), Postives = 162/164 (98.78%), Query Frame = -2
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            MKEKL+Y+ALDY+QE+ETAK+SSSVEK+YELPDGQ+ITIGAERFRCPEVLFQPS IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  214 MKEKLSYIALDYDQEMETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377          
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSI (Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.606e-85
Identity = 153/164 (93.29%), Postives = 162/164 (98.78%), Query Frame = -2
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            MKEKL+Y+ALDY+QE+ETAK+SSSVEK+YELPDGQ+ITIGAERFRCPEVLFQPS IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  214 MKEKLSYIALDYDQEMETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377          
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT3_SOYBN (Actin-3 OS=Glycine max GN=SAC3 PE=3 SV=2)

HSP 1 Score: 315.464 bits (807), Expect = 2.740e-85
Identity = 156/164 (95.12%), Postives = 162/164 (98.78%), Query Frame = -2
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            MKEKLAYVALDYEQELETAKSSSSVEK++ELPDGQ+ITIGAERFRCP++LFQPS+I MEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMF GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF
Sbjct:  213 MKEKLAYVALDYEQELETAKSSSSVEKSHELPDGQVITIGAERFRCPKILFQPSMIEMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFLGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 376          
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT3_SOLTU (Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 4.674e-85
Identity = 152/164 (92.68%), Postives = 163/164 (99.39%), Query Frame = -2
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKL+Y+ALD+EQELET+K+SSSVEK+YELPDGQ+ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKE+TALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  214 VKEKLSYIALDFEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKELTALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377          
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT11_ARATH (Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 4.674e-85
Identity = 152/164 (92.68%), Postives = 161/164 (98.17%), Query Frame = -2
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKLAY+ALDYEQE+ETA +SSSVEK+YELPDGQ+ITIG ERFRCPEVLFQPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  214 VKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377          
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT1_ARATH (Actin-1/3 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=2)

HSP 1 Score: 314.309 bits (804), Expect = 6.104e-85
Identity = 152/164 (92.68%), Postives = 161/164 (98.17%), Query Frame = -2
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKL Y+ALDYEQELETAK+SSSVEKNYELPDGQ+ITIG+ERFRCPEVL+QPS+IGME AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  214 IKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377          
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT7_SOLTU (Actin-75 OS=Solanum tuberosum GN=AC75 PE=3 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 1.041e-84
Identity = 153/164 (93.29%), Postives = 160/164 (97.56%), Query Frame = -2
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            MKEKLAY+ALD+EQEL+  KSSSSVEKN+ELPDGQ+ITIGAERFRCPEVLFQPS IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K E+DESGPSIVHRKCF
Sbjct:  214 MKEKLAYIALDFEQELDMVKSSSSVEKNFELPDGQVITIGAERFRCPEVLFQPSTIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEFDESGPSIVHRKCF 377          
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT1_TOBAC (Actin OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.776e-84
Identity = 151/164 (92.07%), Postives = 162/164 (98.78%), Query Frame = -2
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKL+Y+ALD+EQE+ET+K+SSSVEK+YELPDGQ+ITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYG IVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  214 VKEKLSYIALDFEQEMETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGKIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377          
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT1_DAUCA (Actin-1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.776e-84
Identity = 155/164 (94.51%), Postives = 161/164 (98.17%), Query Frame = -2
Query:  422 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYS-VWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 910
            MKEKLAYVALDYEQELETAK  S+VEKNYELPDGQ+ITIGAERFRCP+VLFQPS+IGME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYS +WIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC
Sbjct:  213 MKEKLAYVALDYEQELETAKRRSAVEKNYELPDGQVITIGAERFRCPQVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSDLWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 376          
The following BLAST results are available for this feature:
BLAST of CV884855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
ACT2_ORYSI1.230e-8594.51Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3... [more]
ACT1_ORYSJ1.606e-8593.29Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE... [more]
ACT1_ORYSI1.606e-8593.29Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2... [more]
ACT3_SOYBN2.740e-8595.12Actin-3 OS=Glycine max GN=SAC3 PE=3 SV=2[more]
ACT3_SOLTU4.674e-8592.68Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1[more]
ACT11_ARATH4.674e-8592.68Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=... [more]
ACT1_ARATH6.104e-8592.68Actin-1/3 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=... [more]
ACT7_SOLTU1.041e-8493.29Actin-75 OS=Solanum tuberosum GN=AC75 PE=3 SV=1[more]
ACT1_TOBAC1.776e-8492.07Actin OS=Nicotiana tabacum PE=3 SV=1[more]
ACT1_DAUCA1.776e-8494.51Actin-1 OS=Daucus carota PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011A06_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884855 ID=CV884855; Name=CV884855; organism=Citrus sinensis; type=EST; length=911bp
TTTTTTTATTAAAGTTTTCTCATACAATAGCTATTAACATTAATGTTCCT
TTTGAGAGGGGGAGAAAAAAAACCTTCAAATATGAAAATTTAGAAAATGA
AATAGAAAAGCATCACAACCACTCTTCATCTCCAGCTACAAACATCCTAC
TTAAAATAAAAAAAAGGAAAAAAAAGAAAAAAGACTTGGTTGAACACCAG
ATGAATGCAAGGCAAGGAAGATGGTTGAGTACAGAAATAAGCCCCCCTCA
AACGCTGTAAGAAGCTTGTATAATAACATCAATATCGAGATATGCCTCCT
TCAATGGCCCCATCCTTAGCACTTCTCCATGTCAACCAACTTGAGTTCGC
GAAACGAGACACAAAAAACCAACTAAATGGAAAAAAAGAACTCACCCATC
AAGCACTTAAAGAACTTAGAAGCATTTCCTGTGGACAATGGATGGACCAG
ACTCATCATACTCGCCCTTTGAGATCCACATCTGCTGGAAGGTGCTGAGG
GATGCAAGGATTGATCCTCCAATCCAAACACTGTATTTTCTCTCTGGTGG
AGCCACGACCTTGATCTTCATGCTGCTTGGAGCAAGTGCTGTGATTTCCT
TGCTCATACGGTCGGCAATACCAGGGAACATAGTTGAACCCCCACTGAGA
ACAATGTTACCATACAGATCCTTTCTAATATCCACATCACACTTCATGAT
GGAGTTGTAGGTAGTCTCATGAATACCAGCAGCTTCCATTCCGATGAGAG
ATGGCTGGAACAGAACTTCTGGGCAACGGAATCTTTCAGCTCCAATGGTG
ATGATCTGGCCATCAGGCAGCTCATAGTTCTTCTCAACAGATGAGCTGCT
CTTGGCAGTCTCAAGTTCTTGCTCATAGTCTAGGGCAACATAAGCAAGCT
TCTCCTTCATG
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