CV884855

Overview
NameCV884855
Unique NameCV884855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACTC_BIOTE (Actin, cytoplasmic OS=Biomphalaria tenagophila PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.317e-79
Identity = 141/164 (85.98%), Postives = 154/164 (93.90%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKL YVALD+EQE++TA +SSS+EK+YELPDGQ+ITIG ERFRCPE +FQPS +GMEAAGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  213 IKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACTC_BIOAL (Actin, cytoplasmic OS=Biomphalaria alexandrina PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.317e-79
Identity = 141/164 (85.98%), Postives = 154/164 (93.90%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKL YVALD+EQE++TA +SSS+EK+YELPDGQ+ITIG ERFRCPE +FQPS +GMEAAGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  213 IKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT_HYDAT (Actin, non-muscle 6.2 OS=Hydra attenuata PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.934e-79
Identity = 141/164 (85.98%), Postives = 155/164 (94.51%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKL+YVALD+EQE++TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCDVDIRKDLY N VLSGG+TMFPGIADRM KEI+ALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  213 IKEKLSYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACTC_BIOGL (Actin, cytoplasmic OS=Biomphalaria glabrata PE=2 SV=2)

HSP 1 Score: 295.434 bits (755), Expect = 2.934e-79
Identity = 141/164 (85.98%), Postives = 153/164 (93.29%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKL YVALD+EQE++TA +SSS+EK+YELPDGQ+ITIG ERFRCPE  FQPS +GMEAAGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  213 IKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEATFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT1_ACACA (Actin-1 OS=Acanthamoeba castellanii PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.934e-79
Identity = 140/164 (85.37%), Postives = 155/164 (94.51%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKL YVALD+EQE+ TA SSS++EK+YELPDGQ+ITIG ERFR PE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+VLSGG+TMFPGIADRM KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  212 IKEKLCYVALDFEQEMHTAASSSALEKSYELPDGQVITIGNERFRAPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMQKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIVHRKCF 375
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT5C_ANOGA (Actin-5C OS=Anopheles gambiae GN=Act5C PE=2 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 3.832e-79
Identity = 141/164 (85.98%), Postives = 153/164 (93.29%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKL YVALD+EQE+ TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  213 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT4_BOMMO (Actin, cytoplasmic A4 OS=Bombyx mori GN=A4 PE=2 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 3.832e-79
Identity = 141/164 (85.98%), Postives = 153/164 (93.29%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKL YVALD+EQE+ TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  213 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT3B_HELAM (Actin-A3b, cytoplasmic OS=Helicoverpa armigera GN=actA3b PE=2 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 3.832e-79
Identity = 141/164 (85.98%), Postives = 153/164 (93.29%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKL YVALD+EQE+ TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  213 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT2_ONCVO (Actin-2 OS=Onchocerca volvulus GN=act-2b PE=3 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 3.832e-79
Identity = 140/164 (85.37%), Postives = 154/164 (93.90%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKL YVALD+EQE+ TA SSSS+EK+YELPDGQ+IT+G ERFRCPE LFQPS +GME+AGIHETTYNSIMKCD+DIRKDLY N VLSGGSTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  213 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGSTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CV884855 vs. ExPASy Swiss-Prot
Match: ACT1_DROME (Actin-5C OS=Drosophila melanogaster GN=Act5C PE=1 SV=4)

HSP 1 Score: 295.049 bits (754), Expect = 3.832e-79
Identity = 141/164 (85.98%), Postives = 153/164 (93.29%), Query Frame = -2 
Query:  419 MKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 910
            +KEKL YVALD+EQE+ TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  213 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
The following BLAST results are available for this feature:
BLAST of CV884855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
ACTC_BIOTE1.317e-7985.98Actin, cytoplasmic OS=Biomphalaria tenagophila PE=... [more]
ACTC_BIOAL1.317e-7985.98Actin, cytoplasmic OS=Biomphalaria alexandrina PE=... [more]
ACT_HYDAT2.934e-7985.98Actin, non-muscle 6.2 OS=Hydra attenuata PE=3 SV=1[more]
ACTC_BIOGL2.934e-7985.98Actin, cytoplasmic OS=Biomphalaria glabrata PE=2 S... [more]
ACT1_ACACA2.934e-7985.37Actin-1 OS=Acanthamoeba castellanii PE=3 SV=1[more]
ACT5C_ANOGA3.832e-7985.98Actin-5C OS=Anopheles gambiae GN=Act5C PE=2 SV=1[more]
ACT4_BOMMO3.832e-7985.98Actin, cytoplasmic A4 OS=Bombyx mori GN=A4 PE=2 SV... [more]
ACT3B_HELAM3.832e-7985.98Actin-A3b, cytoplasmic OS=Helicoverpa armigera GN=... [more]
ACT2_ONCVO3.832e-7985.37Actin-2 OS=Onchocerca volvulus GN=act-2b PE=3 SV=1[more]
ACT1_DROME3.832e-7985.98Actin-5C OS=Drosophila melanogaster GN=Act5C PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011A06_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884855 ID=CV884855; Name=CV884855; organism=Citrus sinensis; type=EST; length=911bp
TTTTTTTATTAAAGTTTTCTCATACAATAGCTATTAACATTAATGTTCCT
TTTGAGAGGGGGAGAAAAAAAACCTTCAAATATGAAAATTTAGAAAATGA
AATAGAAAAGCATCACAACCACTCTTCATCTCCAGCTACAAACATCCTAC
TTAAAATAAAAAAAAGGAAAAAAAAGAAAAAAGACTTGGTTGAACACCAG
ATGAATGCAAGGCAAGGAAGATGGTTGAGTACAGAAATAAGCCCCCCTCA
AACGCTGTAAGAAGCTTGTATAATAACATCAATATCGAGATATGCCTCCT
TCAATGGCCCCATCCTTAGCACTTCTCCATGTCAACCAACTTGAGTTCGC
GAAACGAGACACAAAAAACCAACTAAATGGAAAAAAAGAACTCACCCATC
AAGCACTTAAAGAACTTAGAAGCATTTCCTGTGGACAATGGATGGACCAG
ACTCATCATACTCGCCCTTTGAGATCCACATCTGCTGGAAGGTGCTGAGG
GATGCAAGGATTGATCCTCCAATCCAAACACTGTATTTTCTCTCTGGTGG
AGCCACGACCTTGATCTTCATGCTGCTTGGAGCAAGTGCTGTGATTTCCT
TGCTCATACGGTCGGCAATACCAGGGAACATAGTTGAACCCCCACTGAGA
ACAATGTTACCATACAGATCCTTTCTAATATCCACATCACACTTCATGAT
GGAGTTGTAGGTAGTCTCATGAATACCAGCAGCTTCCATTCCGATGAGAG
ATGGCTGGAACAGAACTTCTGGGCAACGGAATCTTTCAGCTCCAATGGTG
ATGATCTGGCCATCAGGCAGCTCATAGTTCTTCTCAACAGATGAGCTGCT
CTTGGCAGTCTCAAGTTCTTGCTCATAGTCTAGGGCAACATAAGCAAGCT
TCTCCTTCATG
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