CV884852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_BACP2 (10 kDa chaperonin OS=Bacillus pumilus (strain SAFR-032) GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.843e-18 Identity = 40/92 (43.48%), Postives = 66/92 (71.74%), Query Frame = 1 Query: 286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558 +KPLGDRV++++ EEKT GI LP +A+ KPQ G++VA G G+ + ++ + V G ++I+SKYAGTE+++ G +LI+RE D++ ++ Sbjct: 2 LKPLGDRVIIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVNTGDRIIFSKYAGTEVKYEGKEYLILRESDILAVI 93 HSP 2 Score: 73.559 bits (179), Expect = 1.461e-12 Identity = 33/72 (45.83%), Postives = 50/72 (69.44%), Query Frame = 1 Query: 580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795 LKPL DRV I++ E+EE TA G++L +++KEKP G ++A G G + E G R L + G+ +++SKYAG + Sbjct: 2 LKPLGDRVIIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVNTGDRIIFSKYAGTE 73
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_ALKOO (10 kDa chaperonin OS=Alkaliphilus oremlandii (strain OhILAs) GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.843e-18 Identity = 42/93 (45.16%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 283 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 561 +IKPLGDRV++K EE T GI LP +A+ +PQ EV+AVG G + ++ + VK G +VI+SKYAGTE++F+G + I+++ D++ ++E Sbjct: 2 NIKPLGDRVVIKRVEAEETTKSGIVLPGSAKEQPQLAEVMAVGPGGVIEGKEVVMEVKVGDKVIFSKYAGTEVKFDGVEYTILKQSDILAVVE 94 HSP 2 Score: 68.1662 bits (165), Expect = 6.138e-11 Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 577 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795 ++KPL DRV IK EAEETT G++L ++KE+P + V+AVGPG + EG + + G+ V++SKYAG + Sbjct: 2 NIKPLGDRVVIKRVEAEETTKSGIVLPGSAKEQPQLAEVMAVGPGGV-IEGKEVVMEVKVGDKVIFSKYAGTE 73
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_TREDE (10 kDa chaperonin OS=Treponema denticola GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17 Identity = 47/92 (51.09%), Postives = 65/92 (70.65%), Query Frame = 1 Query: 286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 561 +KPLGDRVLVK VE KT GGI +P AQ K Q G VVAVG+ K K+ +SV G +VI+ KYAGT+++ +G +HLI++ +D+V ++E Sbjct: 3 VKPLGDRVLVKPDAVETKTAGGIIIPDTAQEKTQRGVVVAVGD----DKEKIKVSV--GQKVIHDKYAGTQIQIDGVDHLILKSNDLVAVVE 88
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_SYNY3 (10 kDa chaperonin OS=Synechocystis sp. (strain PCC 6803) GN=groS PE=1 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17 Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 280 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVV 549 +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEVV VG GK + VK G +V+YSKYAGT+++ G +++++ E D++ Sbjct: 9 STVKPLGDRVFVKVSPAEEKTAGGILLPDNAKEKPQIGEVVQVGPGKRNDDGTYSPVEVKVGDKVLYSKYAGTDIKLGGDDYVLLTEKDIL 99 HSP 2 Score: 89.7373 bits (221), Expect = 1.970e-17 Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 1 Query: 571 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795 + +KPL DRVF+KV+ AEE TAGG+LL + +KEKP IG V+ VGPG +++G P+ + G+ V+YSKYAG D Sbjct: 8 VSTVKPLGDRVFVKVSPAEEKTAGGILLPDNAKEKPQIGEVVQVGPGKRNDDGTYSPVEVKVGDKVLYSKYAGTD 82
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_PROMT (10 kDa chaperonin OS=Prochlorococcus marinus (strain NATL2A) GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17 Identity = 40/75 (53.33%), Postives = 57/75 (76.00%), Query Frame = 1 Query: 571 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795 + +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V VGPG +E+G+R+ ++ G+ V+YSKYAG D Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTD 82 HSP 2 Score: 85.5001 bits (210), Expect = 3.715e-16 Identity = 41/94 (43.62%), Postives = 61/94 (64.89%), Query Frame = 1 Query: 280 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558 +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ ++++ E D++ ++ Sbjct: 9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_PROMS (10 kDa chaperonin OS=Prochlorococcus marinus (strain AS9601) GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17 Identity = 40/75 (53.33%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 571 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795 + +KPL DR+FIKV+ +EE TAGG+LL +++KEKP +G V VGPG L+E+G+R+ ++ G+ V+YSKYAG D Sbjct: 8 VSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNEDGSRQTPEVSIGDKVLYSKYAGTD 82 HSP 2 Score: 87.0409 bits (214), Expect = 1.277e-16 Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = 1 Query: 280 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558 +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G ++++ E D++ ++ Sbjct: 9 STVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNEDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_PROMM (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9313) GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17 Identity = 39/75 (52.00%), Postives = 57/75 (76.00%), Query Frame = 1 Query: 571 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795 + +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG +++G+R+ + G+ V+YSKYAG D Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTD 82 HSP 2 Score: 85.1149 bits (209), Expect = 4.852e-16 Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 1 Query: 280 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558 +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEVV VG GK V G +V+YSKYAGT+++ + ++++ E D++ ++ Sbjct: 9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIKLSTDEYVLLSEKDILAVV 102
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_PROM1 (10 kDa chaperonin OS=Prochlorococcus marinus (strain NATL1A) GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17 Identity = 40/75 (53.33%), Postives = 57/75 (76.00%), Query Frame = 1 Query: 571 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795 + +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V VGPG +E+G+R+ ++ G+ V+YSKYAG D Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTD 82 HSP 2 Score: 85.5001 bits (210), Expect = 3.715e-16 Identity = 41/94 (43.62%), Postives = 61/94 (64.89%), Query Frame = 1 Query: 280 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558 +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ ++++ E D++ ++ Sbjct: 9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_LISW6 (10 kDa chaperonin OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17 Identity = 42/91 (46.15%), Postives = 65/91 (71.43%), Query Frame = 1 Query: 286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTV-GKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 555 +KPLGDRV++++ EEKT GI LP +A+ KPQ+G++VAVG G+ + K + V G VI++KY+GTE+ + G ++LI+RE D++ I Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLENGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92 HSP 2 Score: 82.8037 bits (203), Expect = 2.408e-15 Identity = 37/72 (51.39%), Postives = 55/72 (76.39%), Query Frame = 1 Query: 580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795 LKPL DRV I+V EAEE TA G++L +++KEKP G ++AVG G + E G ++PL +A G+TV+++KY+G + Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLENGTKEPLEVAEGDTVIFAKYSGTE 73
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_CHLT3 (10 kDa chaperonin OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17 Identity = 43/93 (46.24%), Postives = 64/93 (68.82%), Query Frame = 1 Query: 283 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558 ++KPL DRV+VK EEKT GG+++P + + KPQ GEVVAVG GK + + V+ G +V+Y KY+GTE+ +G ++LI+RE D+ I+ Sbjct: 2 NLKPLADRVIVKPSPAEEKTKGGLYIPDSGKEKPQHGEVVAVGPGKAADNGTVVAMEVQVGQKVLYGKYSGTEVTVDGEDYLIMRESDIFAII 94 HSP 2 Score: 71.2478 bits (173), Expect = 7.250e-12 Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 1 Query: 577 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795 +LKPL DRV +K + AEE T GGL + ++ KEKP G V+AVGPG + G + + G V+Y KY+G + Sbjct: 2 NLKPLADRVIVKPSPAEEKTKGGLYIPDSGKEKPQHGEVVAVGPGKAADNGTVVAMEVQVGQKVLYGKYSGTE 74 The following BLAST results are available for this feature:
BLAST of CV884852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 490
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884852 ID=CV884852; Name=CV884852; organism=Citrus sinensis; type=EST; length=795bpback to top |