CV884852
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_GEOLS (10 kDa chaperonin OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=groS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.039e-18 Identity = 44/93 (47.31%), Postives = 65/93 (69.89%), Query Frame = 1
Query: 286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 561
++PL DR++VK EEKT GG+F+P A+ KPQ GEV+AVG GK + K + VK G +++ KYAGTE++ +G L++REDDV+ ++E
Sbjct: 3 LRPLHDRIIVKRLEGEEKTAGGLFIPDTAKEKPQKGEVIAVGNGKKNDEGKCAPLDVKVGDSILFGKYAGTEVKVDGDEFLMMREDDVLAVIE 95 HSP 2 Score: 76.6406 bits (187), Expect = 1.726e-13 Identity = 34/72 (47.22%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
L+PL+DR+ +K E EE TAGGL + + +KEKP G VIAVG G ++EG PL + G+++++ KYAG +
Sbjct: 3 LRPLHDRIIVKRLEGEEKTAGGLFIPDTAKEKPQKGEVIAVGNGKKNDEGKCAPLDVKVGDSILFGKYAGTE 74
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_ENTFA (10 kDa chaperonin OS=Enterococcus faecalis GN=groS PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 3.039e-18 Identity = 44/93 (47.31%), Postives = 65/93 (69.89%), Query Frame = 1
Query: 286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTV-GKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 561
+KPLGDRV++++ EEKT GGI L S A+ KPQ GEV+AVGEG+ + K+ + VK G V++ KY+GTE+++ G +LIV D++ +E
Sbjct: 2 LKPLGDRVVIRVAKEEEKTVGGIVLASVAKEKPQTGEVIAVGEGRVLENGTKVPMEVKIGDTVMFEKYSGTEVKYEGVEYLIVSAKDIIATVE 94 HSP 2 Score: 79.337 bits (194), Expect = 2.662e-14 Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
LKPL DRV I+VA+ EE T GG++L +KEKP G VIAVG G + E G + P+ + G+TVM+ KY+G +
Sbjct: 2 LKPLGDRVVIRVAKEEEKTVGGIVLASVAKEKPQTGEVIAVGEGRVLENGTKVPMEVKIGDTVMFEKYSGTE 73
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_BACCN (10 kDa chaperonin OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=groS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.039e-18 Identity = 41/92 (44.57%), Postives = 67/92 (72.83%), Query Frame = 1
Query: 286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558
+KPLGDRV++++ EEKT GI LP A+ KPQ G+V+AVG G+ + ++ + V G ++I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct: 2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDRIIFSKYAGTEVKYEGTDYLILRESDILAVI 93 HSP 2 Score: 77.411 bits (189), Expect = 1.012e-13 Identity = 37/72 (51.39%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
LKPL DRV I++ +AEE TA G++L + +KEKP G VIAVG G + E G R L +A G+ +++SKYAG +
Sbjct: 2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDRIIFSKYAGTE 73
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_SYNPW (10 kDa chaperonin OS=Synechococcus sp. (strain WH7803) GN=groS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.969e-18 Identity = 40/75 (53.33%), Postives = 57/75 (76.00%), Query Frame = 1
Query: 571 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
+ +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG +E+G+R+ + G+ V+YSKYAG D
Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKANEDGSRQAPEVGVGDKVLYSKYAGTD 82 HSP 2 Score: 85.5001 bits (210), Expect = 3.715e-16 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 280 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558
+++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEVV VG GK ++ V G +V+YSKYAGT+++ ++++ E D++ ++
Sbjct: 9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKANEDGSRQAPEVGVGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_LACHE (10 kDa chaperonin OS=Lactobacillus helveticus GN=groS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.969e-18 Identity = 45/91 (49.45%), Postives = 63/91 (69.23%), Query Frame = 1
Query: 286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 555
++P+GDRV+VK+K EEKT GGI L S A+ KP GEVVAVGEG K+ +SVK G V+Y +Y+GT +E+ G +L++ E D++ I
Sbjct: 2 LQPIGDRVIVKVKDEEEKTVGGIVLASNAKKKPTEGEVVAVGEGAYASNGEKIPMSVKKGDVVLYDRYSGTNVEYEGEKYLVLHEKDILAI 92 HSP 2 Score: 70.8626 bits (172), Expect = 9.469e-12 Identity = 30/72 (41.67%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
L+P+ DRV +KV + EE T GG++L +K+KP+ G V+AVG G G + P+S+ G+ V+Y +Y+G +
Sbjct: 2 LQPIGDRVIVKVKDEEEKTVGGIVLASNAKKKPTEGEVVAVGEGAYASNGEKIPMSVKKGDVVLYDRYSGTN 73
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_LACH4 (10 kDa chaperonin OS=Lactobacillus helveticus (strain DPC 4571) GN=groS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.969e-18 Identity = 45/91 (49.45%), Postives = 63/91 (69.23%), Query Frame = 1
Query: 286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 555
++P+GDRV+VK+K EEKT GGI L S A+ KP GEVVAVGEG K+ +SVK G V+Y +Y+GT +E+ G +L++ E D++ I
Sbjct: 2 LQPIGDRVIVKVKDEEEKTVGGIVLASNAKKKPTEGEVVAVGEGAYASNGEKIPMSVKKGDVVLYDRYSGTNVEYEGEKYLVLHEKDILAI 92 HSP 2 Score: 70.8626 bits (172), Expect = 9.469e-12 Identity = 30/72 (41.67%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
L+P+ DRV +KV + EE T GG++L +K+KP+ G V+AVG G G + P+S+ G+ V+Y +Y+G +
Sbjct: 2 LQPIGDRVIVKVKDEEEKTVGGIVLASNAKKKPTEGEVVAVGEGAYASNGEKIPMSVKKGDVVLYDRYSGTN 73
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_LACAC (10 kDa chaperonin OS=Lactobacillus acidophilus GN=groS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.969e-18 Identity = 47/91 (51.65%), Postives = 63/91 (69.23%), Query Frame = 1
Query: 286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 555
++P+GDRV+VK+K EEKT GGI L S A+ KP GEVVAVGEG T KL + VK G V+Y KY+GT +E+ G +L++ E D++ I
Sbjct: 2 LQPIGDRVIVKVKEEEEKTVGGIVLASNAKQKPTEGEVVAVGEGAYTSNGDKLPMVVKKGDVVLYDKYSGTNVEYEGEKYLVLHEKDILAI 92 HSP 2 Score: 72.4034 bits (176), Expect = 3.255e-12 Identity = 31/72 (43.06%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
L+P+ DRV +KV E EE T GG++L +K+KP+ G V+AVG G G++ P+ + G+ V+Y KY+G +
Sbjct: 2 LQPIGDRVIVKVKEEEEKTVGGIVLASNAKQKPTEGEVVAVGEGAYTSNGDKLPMVVKKGDVVLYDKYSGTN 73
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_CLOK5 (10 kDa chaperonin OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=groS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.969e-18 Identity = 42/92 (45.65%), Postives = 64/92 (69.57%), Query Frame = 1
Query: 286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 561
I+PLGDRV++K EE T GI LP +A+ KPQ E+VAVG G + ++ + VK G +V++SKYAG E++ +G + I+R+DD++ I+E
Sbjct: 3 IRPLGDRVVIKKIEAEETTKSGIVLPGSAKEKPQEAEIVAVGPGGVIDGKEIKMEVKVGDRVLFSKYAGNEVKIDGVEYTILRQDDILAIIE 94 HSP 2 Score: 68.1662 bits (165), Expect = 6.138e-11 Identity = 33/72 (45.83%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
++PL DRV IK EAEETT G++L ++KEKP ++AVGPG + +G + + G+ V++SKYAGN+
Sbjct: 3 IRPLGDRVVIKKIEAEETTKSGIVLPGSAKEKPQEAEIVAVGPGGV-IDGKEIKMEVKVGDRVLFSKYAGNE 73
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_CLOK1 (10 kDa chaperonin OS=Clostridium kluyveri (strain NBRC 12016) GN=groS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.969e-18 Identity = 42/92 (45.65%), Postives = 64/92 (69.57%), Query Frame = 1
Query: 286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 561
I+PLGDRV++K EE T GI LP +A+ KPQ E+VAVG G + ++ + VK G +V++SKYAG E++ +G + I+R+DD++ I+E
Sbjct: 3 IRPLGDRVVIKKIEAEETTKSGIVLPGSAKEKPQEAEIVAVGPGGVIDGKEIKMEVKVGDRVLFSKYAGNEVKIDGVEYTILRQDDILAIIE 94 HSP 2 Score: 68.1662 bits (165), Expect = 6.138e-11 Identity = 33/72 (45.83%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
++PL DRV IK EAEETT G++L ++KEKP ++AVGPG + +G + + G+ V++SKYAGN+
Sbjct: 3 IRPLGDRVVIKKIEAEETTKSGIVLPGSAKEKPQEAEIVAVGPGGV-IDGKEIKMEVKVGDRVLFSKYAGNE 73
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_ANASP (10 kDa chaperonin OS=Anabaena sp. (strain PCC 7120) GN=groS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.969e-18 Identity = 42/94 (44.68%), Postives = 67/94 (71.28%), Query Frame = 1
Query: 280 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558
+++KPLGDRV VK+ EEKT GG++LP A+ KPQ GEVVA+G GK ++ ++ VK G +V+YSKYAGT+++ ++++ E D++ ++
Sbjct: 9 STVKPLGDRVFVKVSASEEKTAGGLYLPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDKVLYSKYAGTDVKLGTEEYVLLSEKDILAVV 102 HSP 2 Score: 87.0409 bits (214), Expect = 1.277e-16 Identity = 38/75 (50.67%), Postives = 56/75 (74.67%), Query Frame = 1
Query: 571 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
+ +KPL DRVF+KV+ +EE TAGGL L + +KEKP +G V+A+G G +++G+R+ L + G+ V+YSKYAG D
Sbjct: 8 VSTVKPLGDRVFVKVSASEEKTAGGLYLPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDKVLYSKYAGTD 82 The following BLAST results are available for this feature:
BLAST of CV884852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 490
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884852 ID=CV884852; Name=CV884852; organism=Citrus sinensis; type=EST; length=795bpback to top |