CV884852

Overview
NameCV884852
Unique NameCV884852
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_BACST (10 kDa chaperonin OS=Bacillus stearothermophilus GN=groS PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.184e-18
Identity = 42/92 (45.65%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G VVAVG+G+ +    ++   V+ G ++I+SKYAGTE++++G  +LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIEVIETEEKTASGIVLPDTAKEKPQEGRVVAVGKGRVLDSGERVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93          

HSP 2 Score: 71.2478 bits (173), Expect = 7.250e-12
Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = 1
Query:  580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
            LKPL DRV I+V E EE TA G++L + +KEKP  G V+AVG G + + G R    +  G+ +++SKYAG +
Sbjct:    2 LKPLGDRVVIEVIETEEKTASGIVLPDTAKEKPQEGRVVAVGKGRVLDSGERVAPEVEVGDRIIFSKYAGTE 73          
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_BACCR (10 kDa chaperonin OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=groS PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.184e-18
Identity = 42/92 (45.65%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+VVAVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          

HSP 2 Score: 77.0258 bits (188), Expect = 1.321e-13
Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 1
Query:  580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
            LKPL DRV I++ +AEE TA G++L + +KEKP  G V+AVG G + E G R  L +A G+ +++SKYAG +
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTE 73          
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_BACC4 (10 kDa chaperonin OS=Bacillus cereus (strain B4264) GN=groS PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.184e-18
Identity = 42/92 (45.65%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+VVAVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          

HSP 2 Score: 77.0258 bits (188), Expect = 1.321e-13
Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 1
Query:  580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
            LKPL DRV I++ +AEE TA G++L + +KEKP  G V+AVG G + E G R  L +A G+ +++SKYAG +
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTE 73          
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_BACC2 (10 kDa chaperonin OS=Bacillus cereus (strain G9842) GN=groS PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.184e-18
Identity = 42/92 (45.65%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+VVAVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          

HSP 2 Score: 77.0258 bits (188), Expect = 1.321e-13
Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 1
Query:  580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
            LKPL DRV I++ +AEE TA G++L + +KEKP  G V+AVG G + E G R  L +A G+ +++SKYAG +
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTE 73          
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_GEOSW (10 kDa chaperonin OS=Geobacillus sp. (strain WCH70) GN=groS PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18
Identity = 42/92 (45.65%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G VVAVG+G+ +   + +   V+ G ++I+SKYAGTE++++G  +LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIEVIETEEKTASGIVLPDTAKEKPQEGRVVAVGKGRVLDSGECVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93          

HSP 2 Score: 68.1662 bits (165), Expect = 6.138e-11
Identity = 33/72 (45.83%), Postives = 47/72 (65.28%), Query Frame = 1
Query:  580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
            LKPL DRV I+V E EE TA G++L + +KEKP  G V+AVG G + + G      +  G+ +++SKYAG +
Sbjct:    2 LKPLGDRVVIEVIETEEKTASGIVLPDTAKEKPQEGRVVAVGKGRVLDSGECVAPEVEVGDRIIFSKYAGTE 73          
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_DESMR (10 kDa chaperonin OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=groS PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18
Identity = 45/93 (48.39%), Postives = 65/93 (69.89%), Query Frame = 1
Query:  286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 561
            +KPLGDRVLVK    EE T GGI +P +A+ KP  GEV+AVG GK     K L + V+ G  V+++KYAGTE++ +  + L++REDD++ ++E
Sbjct:    3 LKPLGDRVLVKRLEQEEVTKGGIIIPDSAKEKPMKGEVIAVGPGKLAEDGKHLKMHVEKGDLVLFNKYAGTEIKVDDEDFLVMREDDILAVIE 95          

HSP 2 Score: 77.411 bits (189), Expect = 1.012e-13
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 1
Query:  580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
            LKPL DRV +K  E EE T GG+++ +++KEKP  G VIAVGPG L E+G    + +  G+ V+++KYAG +
Sbjct:    3 LKPLGDRVLVKRLEQEEVTKGGIIIPDSAKEKPMKGEVIAVGPGKLAEDGKHLKMHVEKGDLVLFNKYAGTE 74          
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_BACP3 (10 kDa chaperonin OS=Bacillus PS3 GN=groS PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18
Identity = 42/92 (45.65%), Postives = 65/92 (70.65%), Query Frame = 1
Query:  286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558
            +KPLGDR+++++   EEKT  GI LP  A+ KPQ G VVAVG G+ +    ++    K G +VI+SKYAGTE++++G  +LI+RE D++ ++
Sbjct:    2 LKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGAGRVLDNGQRIGRKSKVGDRVIFSKYAGTEVKYDGKEYLILRESDILAVI 93          

HSP 2 Score: 69.3218 bits (168), Expect = 2.755e-11
Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 1
Query:  580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
            LKPL DR+ I+V E EE TA G++L + +KEKP  G V+AVG G + + G R       G+ V++SKYAG +
Sbjct:    2 LKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGAGRVLDNGQRIGRKSKVGDRVIFSKYAGTE 73          
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_BACHK (10 kDa chaperonin OS=Bacillus thuringiensis subsp. konkukian GN=groS PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18
Identity = 41/92 (44.57%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          

HSP 2 Score: 77.411 bits (189), Expect = 1.012e-13
Identity = 37/72 (51.39%), Postives = 51/72 (70.83%), Query Frame = 1
Query:  580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG +
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTE 73          
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_BACCZ (10 kDa chaperonin OS=Bacillus cereus (strain ZK / E33L) GN=groS PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18
Identity = 41/92 (44.57%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          

HSP 2 Score: 77.411 bits (189), Expect = 1.012e-13
Identity = 37/72 (51.39%), Postives = 51/72 (70.83%), Query Frame = 1
Query:  580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG +
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTE 73          
BLAST of CV884852 vs. ExPASy Swiss-Prot
Match: CH10_BACCQ (10 kDa chaperonin OS=Bacillus cereus (strain Q1) GN=groS PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18
Identity = 41/92 (44.57%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  286 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 558
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          

HSP 2 Score: 77.411 bits (189), Expect = 1.012e-13
Identity = 37/72 (51.39%), Postives = 51/72 (70.83%), Query Frame = 1
Query:  580 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND 795
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG +
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTE 73          
The following BLAST results are available for this feature:
BLAST of CV884852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 490
Match NameE-valueIdentityDescription
CH10_BACST5.184e-1845.6510 kDa chaperonin OS=Bacillus stearothermophilus G... [more]
CH10_BACCR5.184e-1845.6510 kDa chaperonin OS=Bacillus cereus (strain ATCC ... [more]
CH10_BACC45.184e-1845.6510 kDa chaperonin OS=Bacillus cereus (strain B4264... [more]
CH10_BACC25.184e-1845.6510 kDa chaperonin OS=Bacillus cereus (strain G9842... [more]
CH10_GEOSW6.770e-1845.6510 kDa chaperonin OS=Geobacillus sp. (strain WCH70... [more]
CH10_DESMR6.770e-1848.3910 kDa chaperonin OS=Desulfovibrio magneticus (str... [more]
CH10_BACP36.770e-1845.6510 kDa chaperonin OS=Bacillus PS3 GN=groS PE=3 SV=... [more]
CH10_BACHK6.770e-1844.5710 kDa chaperonin OS=Bacillus thuringiensis subsp.... [more]
CH10_BACCZ6.770e-1844.5710 kDa chaperonin OS=Bacillus cereus (strain ZK / ... [more]
CH10_BACCQ6.770e-1844.5710 kDa chaperonin OS=Bacillus cereus (strain Q1) G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011A05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884852 ID=CV884852; Name=CV884852; organism=Citrus sinensis; type=EST; length=795bp
TCGACTCTTCTTCAAATTTCAACTAGAAACCTTATCAAACTACTCGCTCG
CTTCTCGCTTATCATTTCCAATCAGAATCTCTCTCGCTCTCTCTGCATCT
GCAAGATGGCGACAGCTCAGCTAACAGCGTCATCAATTAAGGTTCCAGCA
AGGAGCTTGACTTCATTCGATGGTCTCAGACCGTCTTCCGTCAAGTTCGC
TTCCGTCGGAGGTGCTGCCAGCCAACGCTCTTTCCGTCGCTTGGTCGTTA
AAGCCGCTGCAGTCGTGGCTCCCAAGTACACTTCAATTAAACCTTTGGGT
GATAGAGTGCTGGTGAAAATCAAGACTGTAGAGGAGAAAACTGATGGTGG
TATTTTTCTGCCATCTGCAGCTCAAACAAAGCCTCAAGCAGGTGAGGTGG
TAGCTGTTGGCGAGGGGAAGACAGTTGGGAAGGCTAAACTGGACATATCT
GTGAAGCCTGGGACCCAGGTCATCTATTCGAAGTATGCAGGGACTGAGTT
GGAGTTCAACGGCGCAAATCATCTCATAGTGAGGGAGGATGACGTAGTTG
GCATTCTTGAAACAGATGAAATCAAGGATCTTAAGCCCCTTAATGACAGA
GTTTTCATCAAGGTTGCTGAGGCTGAGGAGACAACTGCTGGAGGTTTGTT
GTTGACGGAGGCAAGCAAGGAGAAACCTTCCATTGGAACGGTCATTGCTG
TTGGACCCGGTCCTCTAGATGAGGAAGGTAATAGGAAACCTCTATCCATT
GCACCAGGGAACACGGTGATGTATTCGAAGTATGCAGGGAATGAC
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