CV884851

Overview
NameCV884851
Unique NameCV884851
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length955
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: KLH12_RAT (Kelch-like protein 12 OS=Rattus norvegicus GN=Klhl12 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.024e-13
Identity = 44/135 (32.59%), Postives = 71/135 (52.59%), Query Frame = -3
Query:  405 TLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKL 809
            TL DVT  VE + F AHRI L A SD F AMF     EK    ++I  +     E+++ F+YT +V VT++  Q+LL AA    L+G+K+ C   +   +   N   + + +E  + + L     ++  +HF ++
Sbjct:   31 TLCDVTLRVEQKDFPAHRIVLAACSDYFCAMFTSELSEKGKPYVDIQGLTASTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLESQLDPSNCLGIRDFAETHNCVDLMQAAEVFSQKHFPEV 165          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: KLH12_HUMAN (Kelch-like protein 12 OS=Homo sapiens GN=KLHL12 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.024e-13
Identity = 44/135 (32.59%), Postives = 71/135 (52.59%), Query Frame = -3
Query:  405 TLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKL 809
            TL DVT  VE + F AHRI L A SD F AMF     EK    ++I  +     E+++ F+YT +V VT++  Q+LL AA    L+G+K+ C   +   +   N   + + +E  + + L     ++  +HF ++
Sbjct:   31 TLCDVTLRVEQKDFPAHRIVLAACSDYFCAMFTSELSEKGKPYVDIQGLTASTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLESQLDPSNCLGIRDFAETHNCVDLMQAAEVFSQKHFPEV 165          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: KLH10_RAT (Kelch-like protein 10 OS=Rattus norvegicus GN=Klhl10 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.024e-13
Identity = 39/134 (29.10%), Postives = 74/134 (55.22%), Query Frame = -3
Query:  405 LSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKL 806
            L DV   V G  F AH+  L + S  FRA+F  G+   + +   IP I  ++ +L++ + YT +V +T D  + LL AADQ+ + G+ R C   +  ++ L+N   + + ++ ++   LR    ++I+ +F+++
Sbjct:   38 LCDVVIKVNGFEFNAHKNILCSCSSYFRALFTSGWNNTEKKVYNIPGISPDMMKLIIEYAYTRTVPITPDNVEKLLAAADQFNIMGIVRGCCEFLKSELCLDNCIGICKFTDYYYCPELRQKAYMFILHNFEEM 171          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: KLH10_MOUSE (Kelch-like protein 10 OS=Mus musculus GN=Klhl10 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.024e-13
Identity = 39/134 (29.10%), Postives = 74/134 (55.22%), Query Frame = -3
Query:  405 LSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKL 806
            L DV   V G  F AH+  L + S  FRA+F  G+   + +   IP I  ++ +L++ + YT +V +T D  + LL AADQ+ + G+ R C   +  ++ L+N   + + ++ ++   LR    ++I+ +F+++
Sbjct:   38 LCDVVIKVNGFEFNAHKNILCSCSSYFRALFTSGWNNTEKKVYNIPGISPDMMKLIIEYAYTRTVPITPDNVEKLLAAADQFNIMGIVRGCCEFLKSELCLDNCIGICKFTDYYYCPELRQKAYMFILHNFEEM 171          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: KLH10_HUMAN (Kelch-like protein 10 OS=Homo sapiens GN=KLHL10 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.024e-13
Identity = 39/134 (29.10%), Postives = 74/134 (55.22%), Query Frame = -3
Query:  405 LSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKL 806
            L DV   V G  F AH+  L + S  FRA+F  G+   + +   IP I  ++ +L++ + YT +V +T D  + LL AADQ+ + G+ R C   +  ++ L+N   + + ++ ++   LR    ++I+ +F+++
Sbjct:   38 LCDVVIKVNGFEFSAHKNILCSCSSYFRALFTSGWNNTEKKVYNIPGISPDMMKLIIEYAYTRTVPITPDNVEKLLAAADQFNIMGIVRGCCEFLKSELCLDNCIGICKFTDYYYCPELRQKAYMFILHNFEEM 171          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: TDPZ1_MOUSE (TD and POZ domain-containing protein 1 OS=Mus musculus GN=Tdpoz1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.338e-13
Identity = 61/188 (32.45%), Postives = 90/188 (47.87%), Query Frame = -3
Query:  396 PKQQLDGAVALFKLANKATTLSSVDAAPPSPTPQVYLGD---QFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVD--VTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLSTR 944
            P+ QL     +  L  K   + S +  P    P+  L D   +   N+  +D   LV G  F AH+  L A S  FRAMF+   +E     I+I N+  +VF+ MM FIYTG      +  +A D+L AAD+Y L  LK LCE  + +++S++N +               HT IL  +   +KL T+
Sbjct:  139 PEDQLTICCKVTILGRKYN-MPSQNITPAIKDPRHLLTDDLGELWENSLFTDCCLLVAGHEFRAHKAILAARSPVFRAMFEHEMKESLKTPIKIHNLNPQVFKEMMGFIYTGKAPHLHSHSMACDVLPAADKYGLVSLKVLCEDALCRNLSVKNAT---------------HTLILADLHSTEKLKTQ 310          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: KLH12_MOUSE (Kelch-like protein 12 OS=Mus musculus GN=Klhl12 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.338e-13
Identity = 44/135 (32.59%), Postives = 71/135 (52.59%), Query Frame = -3
Query:  405 TLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKL 809
            TL DVT  VE + F AHRI L A SD F AMF     EK    ++I  +     E+++ F+YT +V VT++  Q+LL AA    L+G+K+ C   +   +   N   + + +E  + + L     ++  +HF ++
Sbjct:   31 TLCDVTLRVEQKDFPAHRIVLAACSDYFCAMFTSELSEKGKPYVDIQGLTAATMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLESQLDPSNCLGIRDFAETHNCVDLMQAAEVFSQKHFPEV 165          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: KLHL7_RAT (Kelch-like protein 7 OS=Rattus norvegicus GN=Klhl7 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.282e-13
Identity = 40/135 (29.63%), Postives = 71/135 (52.59%), Query Frame = -3
Query:  405 TLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKL 809
            TL DV  +V+ R+  AHR+ L A+S  F  MF     E  + ++E+ +   ++ E ++ F YT  + V  +  Q LL AA+QY +E +K++C   + + +   N   +  L+E      L+ T   +I +HF ++
Sbjct:   42 TLCDVILMVQERKIPAHRVVLAAASHFFNLMFTTNMLESKSFEVELKDAEPDIIEQLVEFAYTARISVNSNNVQSLLDAANQYQIEPVKKMCVDFLKEQVDASNCLGISVLAECLDCPELKSTADDFIHQHFTEV 176          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: KLH22_MOUSE (Kelch-like protein 22 OS=Mus musculus GN=Klhl22 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.282e-13
Identity = 42/135 (31.11%), Postives = 70/135 (51.85%), Query Frame = -3
Query:  414 NNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHF 818
            ++  L DV  +VEG+   AHRI L AS D FR MF GG +E +  ++ I  + +     ++ FIYT  ++++L   Q+ L AA Q  +  +   C   +   +  EN+  +Y L++ F    L      YI+++F
Sbjct:   45 DSGILFDVVLVVEGKHIEAHRILLAASCDYFRGMFAGGLKEMEQEEVLIHGVSYNAMCQILHFIYTSELELSLSNVQETLVAACQLQIPEIIHFCCDFLMSWVDEENILDVYRLADLFDLNHLTQQLDTYILKNF 179          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: KLHL7_HUMAN (Kelch-like protein 7 OS=Homo sapiens GN=KLHL7 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.980e-13
Identity = 40/135 (29.63%), Postives = 71/135 (52.59%), Query Frame = -3
Query:  405 TLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKL 809
            TL DV  +V+ R+  AHR+ L A+S  F  MF     E  + ++E+ +   ++ E ++ F YT  + V  +  Q LL AA+QY +E +K++C   + + +   N   +  L+E      L+ T   +I +HF ++
Sbjct:   42 TLCDVILMVQERKIPAHRVVLAAASHFFNLMFTTNMLESKSFEVELKDAEPDIIEQLVEFAYTARISVNSNNVQSLLDAANQYQIEPVKKMCVDFLKEQVDASNCLGISVLAECLDCPELKATADDFIHQHFTEV 176          
The following BLAST results are available for this feature:
BLAST of CV884851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
KLH12_RAT1.024e-1332.59Kelch-like protein 12 OS=Rattus norvegicus GN=Klhl... [more]
KLH12_HUMAN1.024e-1332.59Kelch-like protein 12 OS=Homo sapiens GN=KLHL12 PE... [more]
KLH10_RAT1.024e-1329.10Kelch-like protein 10 OS=Rattus norvegicus GN=Klhl... [more]
KLH10_MOUSE1.024e-1329.10Kelch-like protein 10 OS=Mus musculus GN=Klhl10 PE... [more]
KLH10_HUMAN1.024e-1329.10Kelch-like protein 10 OS=Homo sapiens GN=KLHL10 PE... [more]
TDPZ1_MOUSE1.338e-1332.45TD and POZ domain-containing protein 1 OS=Mus musc... [more]
KLH12_MOUSE1.338e-1332.59Kelch-like protein 12 OS=Mus musculus GN=Klhl12 PE... [more]
KLHL7_RAT2.282e-1329.63Kelch-like protein 7 OS=Rattus norvegicus GN=Klhl7... [more]
KLH22_MOUSE2.282e-1331.11Kelch-like protein 22 OS=Mus musculus GN=Klhl22 PE... [more]
KLHL7_HUMAN2.980e-1329.63Kelch-like protein 7 OS=Homo sapiens GN=KLHL7 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011A03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884851 ID=CV884851; Name=CV884851; organism=Citrus sinensis; type=EST; length=955bp
CTCACGAATTCATTTCAGTGAATAGTCATAAAATACATTTCGAGACATAC
AACCATCACAATCCATGAAAATCAATAATGTTTTGTGAAGGTTATATTTC
AAGCAGTACCTACAACAATTAACTTGAAGAAGCAACTTACAGTCTACAAC
CAACATAACTCTGGCATCAGGAAATGATTATGAGCCACACTACAATCAAC
CAATTAGGAGCTTCACTTGACTTGATATCAGTGAAAAGATCTACTATTTT
CTGTACATCATAACTAGTTAGCGATCAAGAATCAATGACTGGCCATCTAC
AGCCGCGAATTATGTGGGTTAGGTTTGGTGAGAGCTTTTGCAAAGTAATT
GTGGATCTCTGGAATGATACGCTGGATCAGATTAGAATGCCCGGGCCTAG
TACTCAATTTATCAAAGTGCTCCATGATATACAAGATGCATGTGTGCCTC
AATGATATAGCATGAAAAGCTTCTGAAAGTTCGTACATGCTAGAAACATT
TTCCAAAGATATATCCTGTGCAATGGTATATTCACAGAGTCGCTTAAGTC
CCTCCAAGAGATACTGATCAGCCGCTCTAAGGAGATCTTGTGCAATATCC
AATGTAACATCAACAGATCCAGTGTAGATAAATCTCATCATCAACTCAAA
CACTTCCCATCTAATGTTTGGAATTTCAATGTCCCTAGCATCCTTTTCCC
GGTAACCACCATCAAACATTGCACGGAATGCATCTGAAGATGCAAGTAGA
CAAATTCGGTGGGCATAGAAACGTCTTCCTTCAACTAGAAAGGTAACGTC
TGACAACGTAGCATTGTTTACAAACTGGTCCCCTAAATAGACCTGAGGGG
TTGGAGATGGGGGAGCTGCATCAACAGAAGAAAGAGTTGTTGCTTTGTTT
GCCAACTTGAACAAAGCCACAGCACCATCAAGTTGCTGCTTTGGGTTTGT
TGAAC
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