CV884851

Overview
NameCV884851
Unique NameCV884851
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length955
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7427 contig Csv1_Contig7427:73..1027. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: KLHL7_CHICK (Kelch-like protein 7 OS=Gallus gallus GN=KLHL7 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.980e-13
Identity = 40/135 (29.63%), Postives = 71/135 (52.59%), Query Frame = -3
Query:  405 TLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKL 809
            TL DV  +V+ RR  AHR+ L ++S  F  MF     E  + ++E+ +   ++ E ++ F YT  + V  +  Q LL AA+QY +E +K++C   + + +   N   +  L+E      L+ T   +I +HF ++
Sbjct:   42 TLCDVILMVQERRIPAHRVVLASASHFFNLMFTTNMLESKSFEVELKDAEPDIIEQLVEFAYTARISVNSNNVQSLLDAANQYQIEPVKKMCVDFLKEQVDASNCLGISVLAECLDCPELKATADDFIHQHFTEV 176          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: KLH12_XENLA (Kelch-like protein 12 OS=Xenopus laevis GN=klhl12 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.892e-13
Identity = 44/135 (32.59%), Postives = 70/135 (51.85%), Query Frame = -3
Query:  405 TLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKL 809
            TL DVT  V  + F AHRI L A SD F AMF     EK    ++I  +     E+++ F+YT +V VT++  Q+LL AA    L+G+K+ C   +   +   N   + + +E  + + L     +Y  +HF ++
Sbjct:   27 TLCDVTLRVNLKDFPAHRIVLAACSDYFCAMFTNELSEKGKPYVDIQGLTSSTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCDFLESQLDPSNCLGIRDFAETHNCLELMQAAEVYSQKHFPEV 161          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: RCBT1_MOUSE (RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.083e-13
Identity = 37/135 (27.41%), Postives = 71/135 (52.59%), Query Frame = -3
Query:  402 LSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLS 806
            ++D+ F ++G+  + H+  L    + FR+MF   + E     IEI    + V+   ++++YT +VD+  + A  LL  A  Y    LKRLC++ I + I++EN  S++  +  + A  L   C  + + H  +++
Sbjct:  369 IADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSYWNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKRLCQHIIKRGITVENAFSLFSAAVRYDAEDLEEFCFKFCINHLTEVT 503          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: BAT43_CAEEL (BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans GN=bath-43 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 5.083e-13
Identity = 52/199 (26.13%), Postives = 92/199 (46.23%), Query Frame = -3
Query:  321 TTLSSVDAAPPSPTPQVYLGDQFVNNATLSDVTFLVEG------RRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLSTRPGHSNLIQ---RIIPEIHNYFAKALTKP 890
            T +S +   PP        G    +N   SD T + +       + F+ H+  L A S  F AMF+   +E D     + +I  EV   ++ ++YTG       +AQ L+ AAD+Y L+ LK +CE  +   ++ +N S    L++ + A  LR   I +I  + +++    G  +L++   +++ E+    A   T P
Sbjct:  238 TNVSQLFKVPPCRLADDMYG--LFDNKQFSDFTLVCKSDLGSPTQTFHIHKAILAARSRVFSAMFEHHMQESDTNMTTVDDIEPEVMRELLVYMYTGQTKYIEQMAQSLIAAADKYQLDRLKVMCEQALCYQLTTDNASLTLMLADMYSASQLRAHSINFINVNANEVMDTEGWEDLVRDHPKLLEEVFRALATQQTPP 434          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: KLHL7_MOUSE (Kelch-like protein 7 OS=Mus musculus GN=Klhl7 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.638e-13
Identity = 40/135 (29.63%), Postives = 70/135 (51.85%), Query Frame = -3
Query:  405 TLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKL 809
            TL DV   V+ R+  AHR+ L A+S  F  MF     E  + ++E+ +   ++ E ++ F YT  + V  +  Q LL AA+QY +E +K++C   + + +   N   +  L+E      L+ T   +I +HF ++
Sbjct:   42 TLCDVILTVQERKIPAHRVVLAAASHFFNLMFTTNMLESKSFEVELKDAEPDIIEQLVEFAYTARISVNSNNVQSLLDAANQYQIEPVKKMCVDFLKEQVDASNCLGISVLAECLDCPELKATADDFIHQHFTEV 176          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: KLH30_XENLA (Kelch-like protein 30 OS=Xenopus laevis GN=klhl30 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.638e-13
Identity = 42/154 (27.27%), Postives = 75/154 (48.70%), Query Frame = -3
Query:  402 PSPTPQVYLGDQFVN-NATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLS 860
            PS +  +  G Q +  N  LSDV  +V+GR F  HR  L   S  F AMF G ++E  +  +EI  +  EV E ++ F YTG + +     + L+R ++      ++++C   + Q +   N   ++E  E      +    + ++ E+F+ +S
Sbjct:   13 PSHSDAILSGLQTLRFNPRLSDVILVVQGREFPCHRAVLALCSQYFHAMFTGDFQESISAQVEIKEVDPEVMETLIDFSYTGRLTINQGNVEGLIRTSNLLSFPAVRKVCSRYLQQQMDATNCLGIWEFGETHGCPEVAAKALSFLQENFEAVS 166          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: ABTB1_RAT (Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Rattus norvegicus GN=Abtb1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.670e-13
Identity = 41/142 (28.87%), Postives = 73/142 (51.41%), Query Frame = -3
Query:  396 DVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREK-------DARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLSTR 800
            D+ F V    F  H+      SD FRA+ D  +RE        D   + + +I  ++F  ++ ++Y+   ++  ++A D+L  AD YLL GLKRLC  ++AQ +  ++V  ++ +++ F    L   C  Y+ +  +KL  R
Sbjct:  273 DICFRVADSSFLCHKAFFCGRSDYFRALLDDHFRESEEPVASGDPPVVTLHDISPDIFTHVLYYVYSDHTELPPELAYDVLSVADMYLLPGLKRLCGRSLAQLLEEDSVVGVWRIAKLFRLARLEDQCTEYMAKVIEKLVER 414          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: KLH38_DANRE (Kelch-like protein 38 OS=Danio rerio GN=klhl38 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.479e-12
Identity = 39/119 (32.77%), Postives = 63/119 (52.94%), Query Frame = -3
Query:  447 SDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLR 803
            +DV    E +    HR  L++SS  FRAMF   +RE     +++  I  EV E ++ +IYTGS+ +T+++   L++AA       L   C   + + ++ EN  SM  LSE  H  +L+
Sbjct:   34 TDVILCTEDKEIPCHRNVLVSSSPYFRAMFCSNFRESSQARVDLKGIASEVIECVVDYIYTGSITITMELVLPLMQAASMLQYGRLFEACSTFLQEQLNPENCLSMIRLSEILHCETLK 152          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: ABTB1_HUMAN (Ankyrin repeat and BTB/POZ domain-containing protein 1 OS=Homo sapiens GN=ABTB1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.479e-12
Identity = 42/142 (29.58%), Postives = 72/142 (50.70%), Query Frame = -3
Query:  396 DVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARD-------IEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLSTR 800
            D+ F V G  F  H+      SD FRA+ D  +RE +          + +  I  +VF  ++ ++Y+   +++ + A D+L  AD YLL GLKRLC  ++AQ +  + V  ++ +++ F    L   C  Y+ +  +KL  R
Sbjct:  273 DICFRVAGCSFLCHKAFFCGRSDYFRALLDDHFRESEEPATSGGPPAVTLHGISPDVFTHVLYYMYSDHTELSPEAAYDVLSVADMYLLPGLKRLCGRSLAQMLDEDTVVGVWRVAKLFRLARLEDQCTEYMAKVIEKLVER 414          
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: RCBT1_HUMAN (RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.931e-12
Identity = 36/134 (26.87%), Postives = 70/134 (52.24%), Query Frame = -3
Query:  402 SDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLS 803
            +D+ F ++G+  + H+  L    + FR+MF   + E     IEI    + V+   ++++YT +VD+  + A  LL  A  Y    LK+LC++ I + I++EN  S++  +  + A  L   C  + + H  +++
Sbjct:  370 ADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSYWNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKKLCQHIIKRGITVENAFSLFSAAVRYDAEDLEEFCFKFCINHLTEVT 503          
The following BLAST results are available for this feature:
BLAST of CV884851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
KLHL7_CHICK2.980e-1329.63Kelch-like protein 7 OS=Gallus gallus GN=KLHL7 PE=... [more]
KLH12_XENLA3.892e-1332.59Kelch-like protein 12 OS=Xenopus laevis GN=klhl12 ... [more]
RCBT1_MOUSE5.083e-1327.41RCC1 and BTB domain-containing protein 1 OS=Mus mu... [more]
BAT43_CAEEL5.083e-1326.13BTB and MATH domain-containing protein 43 OS=Caeno... [more]
KLHL7_MOUSE6.638e-1329.63Kelch-like protein 7 OS=Mus musculus GN=Klhl7 PE=2... [more]
KLH30_XENLA6.638e-1327.27Kelch-like protein 30 OS=Xenopus laevis GN=klhl30 ... [more]
ABTB1_RAT8.670e-1328.87Ankyrin repeat and BTB/POZ domain-containing prote... [more]
KLH38_DANRE1.479e-1232.77Kelch-like protein 38 OS=Danio rerio GN=klhl38 PE=... [more]
ABTB1_HUMAN1.479e-1229.58Ankyrin repeat and BTB/POZ domain-containing prote... [more]
RCBT1_HUMAN1.931e-1226.87RCC1 and BTB domain-containing protein 1 OS=Homo s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011A03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884851 ID=CV884851; Name=CV884851; organism=Citrus sinensis; type=EST; length=955bp
CTCACGAATTCATTTCAGTGAATAGTCATAAAATACATTTCGAGACATAC
AACCATCACAATCCATGAAAATCAATAATGTTTTGTGAAGGTTATATTTC
AAGCAGTACCTACAACAATTAACTTGAAGAAGCAACTTACAGTCTACAAC
CAACATAACTCTGGCATCAGGAAATGATTATGAGCCACACTACAATCAAC
CAATTAGGAGCTTCACTTGACTTGATATCAGTGAAAAGATCTACTATTTT
CTGTACATCATAACTAGTTAGCGATCAAGAATCAATGACTGGCCATCTAC
AGCCGCGAATTATGTGGGTTAGGTTTGGTGAGAGCTTTTGCAAAGTAATT
GTGGATCTCTGGAATGATACGCTGGATCAGATTAGAATGCCCGGGCCTAG
TACTCAATTTATCAAAGTGCTCCATGATATACAAGATGCATGTGTGCCTC
AATGATATAGCATGAAAAGCTTCTGAAAGTTCGTACATGCTAGAAACATT
TTCCAAAGATATATCCTGTGCAATGGTATATTCACAGAGTCGCTTAAGTC
CCTCCAAGAGATACTGATCAGCCGCTCTAAGGAGATCTTGTGCAATATCC
AATGTAACATCAACAGATCCAGTGTAGATAAATCTCATCATCAACTCAAA
CACTTCCCATCTAATGTTTGGAATTTCAATGTCCCTAGCATCCTTTTCCC
GGTAACCACCATCAAACATTGCACGGAATGCATCTGAAGATGCAAGTAGA
CAAATTCGGTGGGCATAGAAACGTCTTCCTTCAACTAGAAAGGTAACGTC
TGACAACGTAGCATTGTTTACAAACTGGTCCCCTAAATAGACCTGAGGGG
TTGGAGATGGGGGAGCTGCATCAACAGAAGAAAGAGTTGTTGCTTTGTTT
GCCAACTTGAACAAAGCCACAGCACCATCAAGTTGCTGCTTTGGGTTTGT
TGAAC
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