CV884851
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: RCBT2_HUMAN (RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.643e-11 Identity = 42/162 (25.93%), Postives = 79/162 (48.77%), Query Frame = -3 Query: 333 NNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLSTRPGHSNLIQRIIPEIHNYFAKA 818 +N +D+ FLV+G+ YAH++ L + FR+ + E D +E+ + V+ + ++YT S+ ++ + A LL A Y LK+LC+ TI Q I EN ++ + + A L C + + H ++ G + + + + N+ +KA Sbjct: 389 DNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDN--EDDI--VEMSEFSYPVYRAFLEYLYTDSISLSPEEAVGLLDLATFYRENRLKKLCQQTIKQGICEENAIALLSAAVKYDAQDLEEFCFRFCINHLTVVTQTSGFAEMDHDL---LKNFISKA 543
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: KBTB4_MOUSE (Kelch repeat and BTB domain-containing protein 4 OS=Mus musculus GN=Kbtbd4 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.757e-11 Identity = 37/111 (33.33%), Postives = 60/111 (54.05%), Query Frame = -3 Query: 471 SDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSE 803 +DVT VEGR F HR+ L A S FR+MF +E R I + ++ VF+L++ +IY G+V + D Q++ +D Y L L C +A+ + + N + L++ Sbjct: 61 ADVTISVEGREFQLHRLVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRADELQEIYEVSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLAD 171
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: IPP_HUMAN (Actin-binding protein IPP OS=Homo sapiens GN=IPP PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.757e-11 Identity = 44/135 (32.59%), Postives = 64/135 (47.41%), Query Frame = -3 Query: 414 NNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHF 818 N DV V F AHR+ L ASS F A+F GG +E + I I +F++++ FIYTG V++ ++ Q+L+ AAD L + LC + I N +++ SE L YI HF Sbjct: 32 NGQHFCDVQLQVGQESFKAHRLVLAASSPYFAALFTGGMKESSKDVVPILGIEAGIFQILLDFIYTGIVNIGVNNVQELIIAADMLQLTEVVHLCCEFLKGQIDPLNCIGIFQFSEQIACHDLLEFSENYIHVHF 166
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: RCBT2_RAT (RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus GN=Rcbtb2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.213e-11 Identity = 42/164 (25.61%), Postives = 79/164 (48.17%), Query Frame = -3 Query: 333 NNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARD--IEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLSTRPGHSNLIQRIIPEIHNYFAKA 818 +N +D+ FLV+G+ YAH++ L + FR+ + D+ D +E+ + VF + ++YT ++ + + A LL A Y LK+LC+ TI Q I EN ++ + + A L C + + H ++ G + + + + N+ +KA Sbjct: 389 DNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLE------DSEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATFYSETRLKKLCQQTIKQGICEENAIALLSAAVKYDAQDLEEFCFRFCINHLTVVTQTSGFAEMDHDL---LKNFISKA 543
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: MEL26_CAEEL (Protein maternal effect lethal 26 OS=Caenorhabditis elegans GN=mel-26 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 6.213e-11 Identity = 57/191 (29.84%), Postives = 91/191 (47.64%), Query Frame = -3 Query: 354 TTLSSVDAAPPSPTPQVYLGD--QFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFRAMFDG-GYREKDARDIEIPNIRWEVFELMMRFIYTG--SVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLSTRP-------GHSNLIQRIIPEI 890 TT + P+ + Q + D + + L D V G+ AH+ L A S F AM E + + I ++ ++V M+ +IY G + D+T D+A LL AAD+Y LE LK CE + ++I++EN S+ + + + A LR + YI+ ++ P GH NLI I +I Sbjct: 170 TTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDIT-DMATALLIAADKYRLEELKSHCEKYLVENINIENACSLLIIGDLYSAPKLRKRAVTYILARPKNVTGTPGWEDILKGHPNLITDIFSQI 359
BLAST of CV884851 vs. ExPASy Swiss-Prot
Match: BTBD8_HUMAN (BTB/POZ domain-containing protein 8 OS=Homo sapiens GN=BTBD8 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 6.213e-11 Identity = 47/169 (27.81%), Postives = 79/169 (46.75%), Query Frame = -3 Query: 330 DVTFLVEGRRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDV--TLDIAQDLLRAADQYLLEGLKRLCEYTIAQDI----------SLENVSSMYELSEAFHAISLRHTCILYIMEHFDKLSTRPGHSNLIQRIIPEIHNYFAKAL 800 D+ V+G+RF AHR L A S F AM G + E + + I +MM FIY G++D+ ++ Q +L AD Y LEGLK + Y + +D +L ++ ++ + SL C+ +I++HF + + +N+ I N ++L Sbjct: 207 DIDIFVDGKRFKAHRAILSARSSYFAAMLSGCWAESSQEYVTLQGISHVELNVMMHFIYGGTLDIPDKTNVGQ-ILNMADMYGLEGLKEVAIYILRRDYCNFFQKPVPRTLTSILECLIIAHSVGVESLFADCMKWIVKHFARFWSERSFANIPPEIQKSCLNMLIQSL 374 The following BLAST results are available for this feature:
BLAST of CV884851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884851 ID=CV884851; Name=CV884851; organism=Citrus sinensis; type=EST; length=955bpback to top |