CV884844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884844 vs. ExPASy Swiss-Prot
Match: RS7_DESK1 (30S ribosomal protein S7P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps7p PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.079e-39 Identity = 86/181 (47.51%), Postives = 122/181 (67.40%), Query Frame = -3 Query: 234 FEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 776 ++ ++V D SL YI ++ Y+PH+ GR+ KRF KA PIVERL N++M GRN GKK +A IVK + E+I+L T +NP+QV+V A+ N+ PRE+ TRI G+ +VDI+PLRR++ A+ LT GAR AF N +I E LA+E+ AA SYA++KK+EIER+A ++R Sbjct: 22 YDFIEVRDPSLKKYICLKPV----YLPHSGGRHEHKRFGKALVPIVERLINNVMRPGRNMGKKHLAYNIVKKSFELIYLKTGENPLQVLVRAIENAAPREETTRIMYGGITYHVSVDIAPLRRIDLALRHLTEGARLKAFHNPISIEEALAEEIALAASNDPKSYAVQKKEEIERIALSSR 198
BLAST of CV884844 vs. ExPASy Swiss-Prot
Match: RS7_METMP (30S ribosomal protein S7P OS=Methanococcus maripaludis GN=rps7p PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.633e-39 Identity = 92/181 (50.83%), Postives = 118/181 (65.19%), Query Frame = -3 Query: 234 EDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 773 E V V D SL YI V VPHTAGR S K F K++ IVERL N LM + N GKK + IV+ A+ II T +NP+QV+VDA+ NSGPRE+ TRI G+ Q+VD+SP RR++ A + GA ESA +N KT+A+CLADELI A+K S+A+KKK+E ERVA++ R Sbjct: 12 ETVAVKDPSLKSYISVAPV----LVPHTAGRNSKKSFDKSKMNIVERLANKLMANQNNTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNIALGASESAHKNKKTVAQCLADELIFASKADMQKSFAVKKKEEKERVAQSAR 188
BLAST of CV884844 vs. ExPASy Swiss-Prot
Match: RS7_METM5 (30S ribosomal protein S7P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps7p PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.615e-38 Identity = 89/181 (49.17%), Postives = 118/181 (65.19%), Query Frame = -3 Query: 234 EDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 773 E V V D SL YI V VPHTAGR + K F KA+ IVERL N LM + N GKK + IV+ A+ II T +NP+QV+VDA+ NSGPRE+ TRI G+ Q+VD+SP RR++ A + GA +SA +N KT+A+CLADE+I A+K S+A++KK+E ERVA++ R Sbjct: 12 ETVTVKDPSLKSYISVAPV----LVPHTAGRNTKKSFDKAKMNIVERLANKLMANQNNTGKKHETLAIVEEALAIIENRTKENPVQVLVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNIALGASDSAHKNKKTVAQCLADEIIFASKADMQKSFAVRKKEEKERVAQSAR 188
BLAST of CV884844 vs. ExPASy Swiss-Prot
Match: RS7_METM7 (30S ribosomal protein S7P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps7p PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.334e-38 Identity = 88/181 (48.62%), Postives = 118/181 (65.19%), Query Frame = -3 Query: 234 EDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 773 E V V D SL Y+ V VPHTAGR S K F K++ IVERL N LM + N GKK + IV+ A+ II T +NP+QV+VDA+ NSGPRE+ TRI G+ Q+VD+SP RR++ A + GA +SA +N KT+A+CLADE+I A+K S+A++KK+E ERVA++ R Sbjct: 12 ETVTVKDPSLKSYVSVAPV----LVPHTAGRNSKKSFDKSKMNIVERLANKLMANQENTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNIALGASQSAHKNKKTVAQCLADEIIFASKADMQKSFAVRKKEEKERVAQSAR 188
BLAST of CV884844 vs. ExPASy Swiss-Prot
Match: RS7_METM6 (30S ribosomal protein S7P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps7p PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.334e-38 Identity = 88/181 (48.62%), Postives = 118/181 (65.19%), Query Frame = -3 Query: 234 EDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 773 E V V D SL Y+ V VPHTAGR S K F K++ IVERL N LM + N GKK + IV+ A+ II T +NP+QV+VDA+ NSGPRE+ TRI G+ Q+VD+SP RR++ A + GA +SA +N KT+A+CLADE+I A+K S+A++KK+E ERVA++ R Sbjct: 12 ETVTVKDPSLKSYVSVTPV----LVPHTAGRNSKKSFDKSKMNIVERLANKLMANQNNTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNIALGASQSAHKNKKTVAQCLADEIIFASKADMQKSFAVRKKEEKERVAQSAR 188
BLAST of CV884844 vs. ExPASy Swiss-Prot
Match: RS7_METTH (30S ribosomal protein S7P OS=Methanobacterium thermoautotrophicum GN=rps7p PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.108e-37 Identity = 81/178 (45.51%), Postives = 125/178 (70.22%), Query Frame = -3 Query: 240 EDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKA 773 ++V+V D+ L+ YI + + VPHT GR+ ++F K++ IVERL N +M RN+GKK A +IV+ A EII+ T +NP+Q++V AV N+ PRE+ TRI G+ + AVDISP RRV+ ++ +T GA ++AF+N K+I ECLA+E++ AA+ + S+AI+KK+E ER+A++ Sbjct: 11 DEVKVEDMGLAKYICLDSI----LVPHTMGRHVKRQFAKSKVSIVERLINKVMRTERNSGKKNKAYKIVQEAFEIINRRTKENPVQILVKAVENTSPREETTRIKYGGIGYQVAVDISPQRRVDLSLGFITRGAMQAAFKNKKSIEECLANEIMLAAEYDTRSFAIQKKEEKERIARS 184
BLAST of CV884844 vs. ExPASy Swiss-Prot
Match: RS7_METST (30S ribosomal protein S7P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps7p PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.806e-36 Identity = 82/177 (46.33%), Postives = 121/177 (68.36%), Query Frame = -3 Query: 240 DVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKA 770 +V V D+ L +Y+ + VPHT GR+ ++F K++ IVERL N +M RN+GKK A IV+ A+EII+ T QNP+QV+V AV N+ PRE+ TRI G+ + AVDI+P RRV+ ++ +T GA +SAF+N K+ A+CLADE++ A+ S S+A++KK+E ERVA++ Sbjct: 13 EVTVEDMGLQNYVCLDEI----VVPHTMGRHVKRQFAKSKVSIVERLMNKIMRTERNSGKKNKAYSIVEDALEIINNKTKQNPVQVLVKAVENTAPREETTRIKYGGIGYQIAVDIAPQRRVDLSLGFITKGAMQSAFKNKKSAAQCLADEILLASDEDSRSFAVQKKEEKERVARS 185
BLAST of CV884844 vs. ExPASy Swiss-Prot
Match: RS7_CALMQ (30S ribosomal protein S7P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps7p PE=3 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 3.081e-36 Identity = 79/179 (44.13%), Postives = 114/179 (63.69%), Query Frame = -3 Query: 234 DVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 770 DV + D L Y+ ++ +PHT G+Y ++F KA PI+ER+ N LM GRN GKK A +I+K A +II++ T +NP+QV VDAV+N PRE+ TR+ G+ +VD+ P RR++ AI + GAR +F N + I ECLA+E+I AA SYA++++DE+ERVA R Sbjct: 50 DVVIRDPGLRRYMCLKPM----LLPHTEGKYQNRKFGKAMIPIIERMMNQLMKPGRNAGKKQKAYKILKTAFDIIYVATGKNPVQVFVDAVVNVAPREEITRVIYGGIAYPVSVDVGPTRRLDLAIRWIAEGARACSFNNPRPIEECLANEIIAAANNDPASYALRRRDEMERVAATAR 224
BLAST of CV884844 vs. ExPASy Swiss-Prot
Match: RS7_METMA (30S ribosomal protein S7P OS=Methanosarcina mazei GN=rps7p PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.529e-35 Identity = 75/179 (41.90%), Postives = 119/179 (66.48%), Query Frame = -3 Query: 234 DVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 770 +V+V D+ + Y+ + VPH++G+++ ++F K++ IVERL N+LM N GKK + +R V+ A +II+ T QNPIQ++VDA+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ ++ G +AF++ +++AECLA ELI AA + S++I +KD ERVAKA R Sbjct: 15 EVEVRDLGIKRYVSLAPV----IVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEEAFDIINRKTQQNPIQILVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDAKERVAKAAR 189
BLAST of CV884844 vs. ExPASy Swiss-Prot
Match: RS7_METTP (30S ribosomal protein S7P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps7p PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.997e-35 Identity = 75/179 (41.90%), Postives = 120/179 (67.04%), Query Frame = -3 Query: 234 DVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 770 +V++ D+S+ YI ++ V HT GR++ ++F+K++ +VERL N +M +N G+K +A RIV+ A +IIH T +NP+ V+V A+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ L+ GA +++F++ ++I CLADE+I AA S+A+ +KD IERVAKA R Sbjct: 11 EVEIPDLSVKGYINLKPR----IVLHTGGRHAKQQFKKSELHVVERLINKMMRKEKNTGQKQIAYRIVEEAFDIIHSRTKENPLSVLVRAISNAGPREEVVRLKYGGITVPKAVDTAPQRRVDTALMLIAKGAWQASFKSRRSIQNCLADEIIAAANYDVKSFAVSRKDSIERVAKAAR 185 The following BLAST results are available for this feature:
BLAST of CV884844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884844 ID=CV884844; Name=CV884844; organism=Citrus sinensis; type=EST; length=778bpback to top |