CV884838

Overview
NameCV884838
Unique NameCV884838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.229e-30
Identity = 79/231 (34.20%), Postives = 121/231 (52.38%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            L  NFY  TCP+  DIIR+ +      +  TA + +R  FHDC    CDAS+L+ ST    +E++   +  +    F  I   K A+E  CP  VSC+DI+ ++ RD ++ +GGPY  +  GRRD R S++ +L   LP  +  +S ++++F + G     +VAL G+HS+G +HC + V R+    +   NP     +   C +   DP     V ND  TP    + YY
Sbjct:   21 LTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHCKEFVGRV-GRNNTGYNPRFAVALKKACANYPKDPTI--SVFNDIMTPNKFDNMYY 248          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.605e-30
Identity = 77/233 (33.05%), Postives = 121/233 (51.93%), Query Frame = 2
Query:  134 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            +FY  TCPQ  DI+   +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K A+E+ CP  VSCAD+L ++ ++ +V  GGP   +  GRRD  +   ++    LP  + ++  + +RF  +G+D +  LVAL G H+ G++ C  ++ RLY        DP L+  ++  +  +CP        V +   D  TP +  + YY
Sbjct:   27 SFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCPRNGNQSVLVDF---DLRTPTLFDNKYY 256          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.097e-30
Identity = 73/187 (39.04%), Postives = 109/187 (58.29%), Query Frame = 2
Query:  137 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSHSVGRTHCVKLVHRLY-PEVDPAL 691
            FY+ TCP AE I+   V   + R++    + LR  FHDC V+ CDASLL+D T +  SEK + R+ G+R F  I+  K+ +E  CP  VSCADI+ ++ RD +   GGP   ++TGRRDG +S    ++   P    S++  ++ F +IG +   +VAL+ G H+VG  HC     R+  P++D  L
Sbjct:   26 FYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPTTERPSEKSVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNPSDVKLLGP--TVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRIKDPKMDSKL 210          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.097e-30
Identity = 81/236 (34.32%), Postives = 122/236 (51.69%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            L   FY ++CP   +I+R+ +    +   + A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD R++  ++    LP  + ++  +   FA +G++ P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V  + YY
Sbjct:   11 LTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPRNGNQSVLVDF---DLRTPTVFDNKYY 243          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.738e-30
Identity = 79/229 (34.50%), Postives = 118/229 (51.53%), Query Frame = 2
Query:  134 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLL--DSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            ++Y+ TCP    I+RE V     +   TA   LR  FHDC ++ CDAS+L+  +S  K   + +++ S     F  +  IK A+E  CPGVVSCADIL  + RD V  +GGPY  +K GR+DG +S+A  +   +P  N ++  +   F   G     +VAL G+H++G +HC +   RLY    D  +NP     +   C +   D     +  ND  TP    + Y+
Sbjct:   36 DYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFSDRLYGSRADKEINPRFAAALKDLCKNHTVDDTIAAF--NDVMTPGKFDNMYF 262          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.738e-30
Identity = 78/235 (33.19%), Postives = 121/235 (51.49%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            L + FY+ +C  AE I++++V+  + R    A   +R  FHDC V+ CD S+L+DST    +EK+   +   +R F  I++ K  +E  C GVVSCADI+  + RD V   GG    +  GRRDGR S A      LP    ++  + + F+  G+    +V L G+H++GR+HC    +RLY        DP L+P +   +  +CP    +   V  V  +  +P +    YY
Sbjct:   61 LQVGFYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLKTQCPQGSTNTNLV--VPMNPSSPSITDVGYY 293          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.738e-30
Identity = 77/231 (33.33%), Postives = 110/231 (47.62%), Query Frame = 2
Query:  137 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            FY  TCP A  I+R  ++   +       S +R  FHDC V  CD SLLLD T    SEK    +    R F  +++IK A+E  CPG+VSC+DIL L+    V   GGP   +  GRRDG  +        LP   + ++ +  +F A+G+    +V+L G+H+ GR  CV   +RL+        DP LN   +  +   CP    +         D  TP    +NY+
Sbjct:   37 FYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQ---NGSNTGITNLDLSTPDAFDNNYF 264          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.738e-30
Identity = 76/236 (32.20%), Postives = 119/236 (50.42%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-------YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            L  NFY  +C  AE ++R  V+             LR  FHDC VQ CDAS+L+       +EK    +  +  F  I+  K A+E  CP  VSCADI+ L+ RD V A GGP + + TGRRDG++S A  +   + D + ++  +++ F++ G+    LV L G+H++G +HC     R        +  +D +L+  +   +++KC  +     +   V ND  T  V  + YY
Sbjct:   29 LSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNS---TEKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHCNAFNGRFQRDSKGNFEVIDASLDNSYAETLMNKCSSS---ESSSLTVSNDPETSAVFDNQYY 258          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.738e-30
Identity = 82/239 (34.31%), Postives = 121/239 (50.63%), Query Frame = 2
Query:  116 DPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            D  L   FY  +CP   +I+R+ +    +       S LR  FHDC V  CDAS+LLD+T   L+EK+ +  +   R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  + + FA +G+D P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V  + YY
Sbjct:   27 DAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDF---DLRTPTVFDNKYY 262          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.577e-30
Identity = 81/206 (39.32%), Postives = 111/206 (53.88%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKC 727
            L + FY  +CPQAE I+R  V+  +        + LR  FHDC V+ CDASLL+DST    SEK    +  +R F  I+ IK  +E  CP  VSCADI+ L+ RD V   GGP   + TGRRDGR S    L+  LP    S+S  +  F   G++    VALLG+H+VG+ +C     R+         DP+++P  V  + + C
Sbjct:   24 LRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDSTN---SEKTAGPNGSVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPTGRRDGRVSNN--LDVTLPGPTISVSGAVSLFTNKGMNTFDAVALLGAHTVGQGNCGLFSDRITSFQGTGRPDPSMDPALVTSLRNTC 224          
The following BLAST results are available for this feature:
BLAST of CV884838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER31_ARATH1.229e-3034.20Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER38_ARATH1.605e-3033.05Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER8_ARATH2.097e-3039.04Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER1C_ARMRU2.097e-3034.32Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER65_ARATH2.738e-3034.50Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER5_VITVI2.738e-3033.19Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER54_ARATH2.738e-3033.33Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER46_ARATH2.738e-3032.20Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER1B_ARMRU2.738e-3034.31Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER57_ARATH3.577e-3039.32Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010H08_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884838 ID=CV884838; Name=CV884838; organism=Citrus sinensis; type=EST; length=811bp
CTTTAGTGAGTGAAGAGTAGAAGAGAAAATGGGTACGAAAGCTGTCTTCT
TGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCTGAGGTCTGCTTTG
GCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATTTTTACAAGGATAC
ATGCCCTCAGGCCGAGGACATTATCAGGGAACAAGTTAAGCTTCTGTACA
AGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAACATTTTCCATGAC
TGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGGACTCGACAAGAAA
GACCTTGTCTGAGAAGGAGATGGACAGGAGCTTTGGTATGAGGAACTTCA
GGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTGCCCTGGTGTT
GTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAGAGATGGCGTTGTTGC
GCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATGGTAGAA
AAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAATGACAGC
ATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCCTGG
ACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGA
AGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCCTGAC
CATGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCAA
GGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGGAC
ACAACTACTAT
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