CV884838

Overview
NameCV884838
Unique NameCV884838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.318e-29
Identity = 77/238 (32.35%), Postives = 124/238 (52.10%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR--KTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            L  ++Y   CPQ E ++       +K    +A + +R  FHDC V+ CD S+L+++ +  K L+E+E   +  +R   F  I   K  VE  CP +VSC+DIL ++ RD +   GGPY  +K GR DG++S A+ +   +P  N ++  +++ FA+ G+    LV L GSH++G  HC   + RLY        DP+L+   +  +   CP +      V  +  D  TP V  + Y+
Sbjct:   42 LSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCPFSGGSSGVV--LPLDATTPFVFDNGYF 277          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.954e-29
Identity = 79/227 (34.80%), Postives = 119/227 (52.42%), Query Frame = 2
Query:  134 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMV 793
            +FY  TCP   +II+  +    +     A S LR  FHDC V+ CDAS+LLD+++   +EK+   +    R F  I+ +K A+ER CP  VSCADIL ++ +  V+  GGP   +  GRRD  ++  ++    LP    +++ + + FA +G++ P  LVAL G H+ GR  C+ +  RLY        DP LNP ++  +   CP            RN  GT +V
Sbjct:    5 DFYSRTCPSVFNIIKNVIVDELQTDPRIAASILRLHFHDCFVRGCDASILLDTSKSFRTEKDAAPNVNSARGFNVIDRMKTALERACPRTVSCADILTIASQISVLLSGGPSWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARCLFVTARLYNFNGTNRPDPTLNPSYLADLRRLCP------------RNGNGTVLV 219          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.745e-29
Identity = 79/235 (33.62%), Postives = 122/235 (51.91%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD--RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDP----ALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            L  ++Y  TCP+ E+ + + V         TA   LR  FHDC V  CDAS+L+ ST +  SE++ D  RS     F  I  IK AVE +CP +VSC+DILV + R  +  +GGP + +K GR+D   S    +E  L   N +M  ++  F + G+    +VAL+G+H++G +HC +   R++ + D      +NP +   +   C +   D +   +  ND  TP    + YY
Sbjct:   22 LSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIFNKSDQNGPVEMNPKYAAELRKLCANYTNDEQMSAF--NDVFTPGKFDNMYY 254          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.809e-29
Identity = 75/198 (37.88%), Postives = 104/198 (52.53%), Query Frame = 2
Query:  137 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKC 727
            FY  +CP+AE I+   V   ++  K+   ++LR  FHDC V+ CDASLL+D      SEK    +  +R +  I+  K  +E  CP  VSCADI+ L+ RD V   GGP   + TGRRDG +S     +  LP     +S  ++ FAA G++   +V L+ G HSVG  HC     RL    D A+ P     +  KC
Sbjct:   26 FYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNASVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNPN--DVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL---SDRAMEPSLKSSLRRKC 218          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.151e-28
Identity = 71/205 (34.63%), Postives = 113/205 (55.12%), Query Frame = 2
Query:  137 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERE--CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 730
            FY+++CP  E I+R  V+  +++   TA + LR  FHDC V+ CDAS+++ S  +   +   D S     F  +   K+AV+    C   VSCADIL L+ R+ VV  GGP  P++ GRRDGR S    ++  LP    +++ +   F+  G+    ++AL G+H++G  HC K+  R+Y       +DP++N  +V  +   CP
Sbjct:   31 FYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIASPSER--DHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLKQMCP 233          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.151e-28
Identity = 82/236 (34.75%), Postives = 116/236 (49.15%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            L   FY  +CP   +I+RE +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  E+    LP    ++  +   F  +G+D P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +   CP    +      V  D  TP V  + YY
Sbjct:   32 LTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLCP---LNGNRSALVDFDLRTPTVFDNKYY 264          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.151e-28
Identity = 82/233 (35.19%), Postives = 118/233 (50.64%), Query Frame = 2
Query:  134 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            +FY  TCP   DII   +    +     A S LR  FHDC V+ CDAS+LLD++    +EK+    +   R F  I+ +K A+ER CPG VSCADIL ++ +  V+  GGP+ P+  GRRD  ++   +    LP    +++ +   FA +G++    LVAL G H+ GR  C  +  RLY        DP+LNP ++  +   CP    +      V  D  TP      YY
Sbjct:   34 DFYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNSPDPSLNPTYLVELRRLCPQ---NGNGTVLVNFDVVTPDAFDSQYY 263          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.151e-28
Identity = 75/223 (33.63%), Postives = 111/223 (49.78%), Query Frame = 2
Query:  107 NEEDPGLVMN----FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPD 745
            N    GL  N    FY  +CP+ + I++  V   +K     A S LR  FHDC V  CD S+LL+ +     EK    +   +R F  IE+IK  +E  CP  VSCADI+ L+ R+ VV  GGP+ P+  GRRD   +  +     LP   +++  +  +F  +G+D   +V L G+H++G   C  + HRL+      + DP L       +L K  D  P+
Sbjct:   38 NGHGHGLTSNLNYRFYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSA--LLSKLKDTCPN 258          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.962e-28
Identity = 75/208 (36.06%), Postives = 106/208 (50.96%), Query Frame = 2
Query:  122 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSHSVGRTHCVKLVHRLYPE----VDPALNPDHVPHMLHKCP 730
            G  + FY  TCP AE I+R  V   +      A   LR   HDC VQ CD S+LL       SE+    +  +  F  I++ K  +E  CPGVVSCADIL L+ RD V    G    + TGRRDGR S A  +   LP  +DS+++   +F+A  ++   LV L+ G H++G   C  + +R++       DP ++   VP +   CP
Sbjct:   24 GTRIGFYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGPN---SERTAGANVNLHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNVNN-LPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAACGFITNRIFNSSGNTADPTMDQTFVPQLQRLCP 227          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.962e-28
Identity = 73/226 (32.30%), Postives = 110/226 (48.67%), Query Frame = 2
Query:  137 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            FY ++CP   +I+R  V+      +      +R  FHDC V  CD S+LL+     +SE     +  +  F  + NIK AVE+ CPGVVSCADIL ++    V   GGP   ++ GRRD R++  +     LP   ++++ +  +F  + +D+  LVAL G+H+ G++ C     RL     D  LNP +   +   C           +V  D  TP     NYY
Sbjct:    2 FYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSELAAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRLNVSNPDSTLNPRYAQQLRQACSSG-----RDTFVNLDPTTPNKFDKNYY 222          
The following BLAST results are available for this feature:
BLAST of CV884838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER19_ARATH2.318e-2932.35Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PERE5_ARMRU3.954e-2934.80Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER6_ARATH6.745e-2933.62Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER44_ARATH8.809e-2937.88Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER45_ARATH1.151e-2834.63Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER34_ARATH1.151e-2834.75Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER22_ARATH1.151e-2835.19Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PER10_ARATH1.151e-2833.63Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER62_ARATH1.962e-2836.06Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER2_CUCSA1.962e-2832.30Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_010H08_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884838 ID=CV884838; Name=CV884838; organism=Citrus sinensis; type=EST; length=811bp
CTTTAGTGAGTGAAGAGTAGAAGAGAAAATGGGTACGAAAGCTGTCTTCT
TGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCTGAGGTCTGCTTTG
GCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATTTTTACAAGGATAC
ATGCCCTCAGGCCGAGGACATTATCAGGGAACAAGTTAAGCTTCTGTACA
AGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAACATTTTCCATGAC
TGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGGACTCGACAAGAAA
GACCTTGTCTGAGAAGGAGATGGACAGGAGCTTTGGTATGAGGAACTTCA
GGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTGCCCTGGTGTT
GTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAGAGATGGCGTTGTTGC
GCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATGGTAGAA
AAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAATGACAGC
ATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCCTGG
ACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGA
AGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCCTGAC
CATGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCAA
GGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGGAC
ACAACTACTAT
back to top