CV884838

Overview
NameCV884838
Unique NameCV884838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.834e-27
Identity = 80/229 (34.93%), Postives = 109/229 (47.60%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            L   FY  +CP A   IR  V    ++      S LR  FHDC V+ CDASLLL+ T    S+   + +   R F  + +IK  VE  CPG+VSCADIL ++ RDGVVALGGP   +  GRRD   S A      LP    S+  +L  +    ++   +VAL G+H++G+  C      +Y   D  +N      +   CP A     +      D  TP    + YY
Sbjct:   31 LSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTSGEQSQGP-NLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDSTASFAGQTSD-LPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYN--DTNINSAFAASLRANCPRA----GSTALAPLDTTTPNAFDNAYY 251          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 6.313e-27
Identity = 77/239 (32.22%), Postives = 118/239 (49.37%), Query Frame = 2
Query:  116 DPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            D  L   FY ++CP   +I+R+ +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVE  CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  + + F  +G++ +  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +   CP    +      V  D  TP +  + YY
Sbjct:   29 DAQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP---LNGNLSALVDFDLRTPTIFDNKYY 264          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.077e-26
Identity = 78/238 (32.77%), Postives = 122/238 (51.26%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            L  NFY ++CP  E I+++ V+   K+   T  + LR  FHDC V  CDAS+++ ST    +EK+   +  +    F  +   K+A++    C   VSCADIL L+ RD VVA  GP   ++ GR DG  S A  +   LP  N+ ++ + + FA   +    ++AL  +H++G  HC K+ +R+Y       VDP LN  +   +   CP  + DP+    +  D  TP    + Y+
Sbjct:   27 LKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLACPKTV-DPRIA--INMDPTTPRQFDNIYF 261          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.077e-26
Identity = 78/226 (34.51%), Postives = 107/226 (47.35%), Query Frame = 2
Query:  137 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            FY  +CP+A   I+  V     +      S LR  FHDC VQ CD S+LL+ T     E+  + + G +R F  ++NIK  VE  CPGVVSCADIL ++ RD VVALGGP   +  GRRD   +   +    LP  +  ++ +   FA   +    LVAL G+H++G   C      +Y   D  +N          CP A  +         D  TP    + YY
Sbjct:   31 FYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQCKNFRAHIYN--DTNVNAAFATLRRANCPAAAGNGDG-NLAPLDTATPTAFDNAYY 253          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.406e-26
Identity = 76/203 (37.44%), Postives = 99/203 (48.77%), Query Frame = 2
Query:  137 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 730
            +Y   C   E I+R  V+  Y  +   A   LR  FHDC VQ CDAS+LL       SE+    +  +R F  IE  K  +E  CP  VSCADIL L+ RD V   GGP+ P+  GR DGR S A      LP   DS++V   RFA   ++   LV L   H++G   C+    R +        DP + P  VP +  +CP
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPN---SERTAIPNLSLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISLAS--NVILPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCP 235          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.399e-26
Identity = 67/186 (36.02%), Postives = 93/186 (50.00%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVD 682
            L   FY  +CP A   I+  V            S +R  FHDC VQ CDAS+LL    +         +  +R F  ++NIK  VE  C   VSCADIL ++ RD VVALGGP   +  GRRD   +        LP  + S++ ++  F+  G+D   +VAL G+H++G+  C     RLY E +
Sbjct:   25 LSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQEQNAGPN----AGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETN 206          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.399e-26
Identity = 67/186 (36.02%), Postives = 93/186 (50.00%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVD 682
            L   FY  +CP A   I+  V            S +R  FHDC VQ CDAS+LL    +         +  +R F  ++NIK  VE  C   VSCADIL ++ RD VVALGGP   +  GRRD   +        LP  + S++ ++  F+  G+D   +VAL G+H++G+  C     RLY E +
Sbjct:   25 LSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQEQNAGPN----AGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETN 206          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.133e-26
Identity = 78/241 (32.37%), Postives = 115/241 (47.72%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD---RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA-EILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE--------VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLGHNYY 811
            L + FY  +CP AE ++R+ V   + +    A   +R  FHDC V+ CD S+LL +      + E D    +  +R F  I+  K AVE+ CP  VSCADI+  + RD +   G     +  GRRDGR S A E ++  LP    +   + + F A  +    +V L G+H+VGR+ C     R++          VD  L+P +   +   CP        +     D GTP VL +NYY
Sbjct:   35 LRVGFYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLL-TVNPGGGQTERDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSNATETVD--LPPPTSTAQSLTDLFKAKELSVEDMVVLSGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRALCPSNTTQTTPIT-TAMDPGTPNVLDNNYY 271          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.092e-26
Identity = 69/192 (35.94%), Postives = 99/192 (51.56%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPD 700
            L   FY  TCP    I+R  +    +         +R  FHDC V  CD S+LLD T  T +EK+   + G   F  +++IK A+E  CPGVVSCADIL L+   GVV   GP   +  GR+D   +        +P   ++++V++ +F   G+D   LVAL G+H+ GR  C     RL+   + + NPD
Sbjct:   24 LSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLD-TDGTQTEKDAPANVGAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLF-NFNGSGNPD 213          
BLAST of CV884838 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.652e-25
Identity = 74/205 (36.10%), Postives = 105/205 (51.22%), Query Frame = 2
Query:  131 MNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 730
            + FY + C   E I+R  V+   +     A   LR  FHDC V  CD S+LL       SE+    +  +R F  IE  K  +E+ CP  VSCADIL L+ RD VV  GG    +  GR DGR S+A   +  LP  +DS++   + FAA  ++   LV L+G H++G   C  +  R        + DP+++P  VP +L +CP
Sbjct:   39 VGFYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLLAGNT---SERTAVPNRSLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQAS--DVNLPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQCP 238          
The following BLAST results are available for this feature:
BLAST of CV884838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER66_MAIZE4.834e-2734.93Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER1A_ARMRU6.313e-2732.22Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER73_ARATH1.077e-2632.77Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER70_MAIZE1.077e-2634.51Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER70_ARATH1.406e-2637.44Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER2_ORYSJ2.399e-2636.02Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI2.399e-2636.02Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER1_MAIZE3.133e-2632.37Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PERX_TOBAC4.092e-2635.94Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER69_ARATH2.652e-2536.10Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010H08_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884838 ID=CV884838; Name=CV884838; organism=Citrus sinensis; type=EST; length=811bp
CTTTAGTGAGTGAAGAGTAGAAGAGAAAATGGGTACGAAAGCTGTCTTCT
TGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCTGAGGTCTGCTTTG
GCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATTTTTACAAGGATAC
ATGCCCTCAGGCCGAGGACATTATCAGGGAACAAGTTAAGCTTCTGTACA
AGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAACATTTTCCATGAC
TGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGGACTCGACAAGAAA
GACCTTGTCTGAGAAGGAGATGGACAGGAGCTTTGGTATGAGGAACTTCA
GGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTGCCCTGGTGTT
GTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAGAGATGGCGTTGTTGC
GCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATGGTAGAA
AAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAATGACAGC
ATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCCTGG
ACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGTGTGA
AGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCCTGAC
CATGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCAA
GGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGGAC
ACAACTACTAT
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