CV884827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBC9A_DANRE (SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.792e-17 Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = 3 Query: 270 PEGE-SIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQD--KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQKQ 617 P+G ++ W I G KGT +EG +KL + F DYP PP+ KFE FHPNV G +CL IL++ W A + ILL IQ LL EPN + P + A + N+ +Y K V+ Q Sbjct: 32 PDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQ 151
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.953e-17 Identity = 48/115 (41.74%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 282 SIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDK--WSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQKQ 617 +++ W I G T +EG Y L + F DYP KPP+ +F FHPNV G +CL IL ++ W + +T+LL IQ LL PNP+SP L L NKE+Y K V+ Q Sbjct: 37 NLYVWNCGIPGKTKTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEADWKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKVKAQ 151
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.953e-17 Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 3 Query: 279 ESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-QDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQ 611 +++F W T G ++Y G + SL FPLDYPF+PP ++F T +HPN D GN+CL IL Q + + R++L I LL EPNP+ PL S A N++ + K+ + Sbjct: 34 DNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIAR 146
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBC1_MIMIV (Probable ubiquitin-conjugating enzyme E2 L460 OS=Acanthamoeba polyphaga mimivirus GN=UBC PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.468e-17 Identity = 46/113 (40.71%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 279 ESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-QDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQ 611 E+IF W I+G + ++YE +++L + DYP+ P+VKF T H NV+ G+ICL+IL +D W+++ + +I+ SI LL +PNPE P NS A+L N+K Y K ++ Sbjct: 34 ENIFLWKVNIKGPENSLYENYNFELEIELSNDYPYSSPKVKFITPIQHMNVNDKGDICLNILKKDGWNASLNIISIIWSIIVLLDQPNPEDPFNSELASLYRNDKLSYDKKIR 146
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.448e-17 Identity = 51/134 (38.06%), Postives = 74/134 (55.22%), Query Frame = 3 Query: 198 VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA-ALLNNKEDY 596 V +++ KE+ +L + G+ P E I +IEG +GT Y G +++ L D+P PP+ F T FHPNV G IC+++L+ W + R +LL+I+ LL PNPES LN A LL N E+Y Sbjct: 12 VIRQVYKEVSTLTPDPPE-GIKIIPNEEDITDVQVSIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 8.448e-17 Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 300 GTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA 569 G I G T YEG Y+L + P YPF PP+V+F T +HPN+ G ICLDIL+D+W++A RT+LLS+Q+LL P+ P ++ A Sbjct: 41 GEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVA 131
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 8.448e-17 Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 300 GTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA 569 G I G T YEG Y+L + P YPF PP+V+F T +HPN+ G ICLDIL+D+W++A RT+LLS+Q+LL P+ P ++ A Sbjct: 41 GEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVA 131
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 8.448e-17 Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 300 GTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA 569 G I G T YEG Y+L + P YPF PP+V+F T +HPN+ G ICLDIL+D+W++A RT+LLS+Q+LL P+ P ++ A Sbjct: 41 GEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVA 131
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBCD4_DROME (Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster GN=UbcD4 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 8.448e-17 Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 3 Query: 300 GTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 620 G I G T YEG + L + P YPF PP+V+F T +HPN+ G ICLDIL+D W++A RT+LLS+Q+LL P+ P ++ A +K D + K + Sbjct: 41 GEIAGPPDTPYEGGKFVLEIKVPETYPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQFKDKYDLFLLTAKHW 148
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.103e-16 Identity = 48/120 (40.00%), Postives = 68/120 (56.67%), Query Frame = 3 Query: 207 RLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL----QDKWSSAYDCRTILLSIQSLLGEPNPESPL 554 RL++EL L+ GV + ++ I GG G+ YEG + L + P YPF+PP+++F T +HPN+D G ICLDIL + W A + T+L SIQ L+ EPNP+ PL Sbjct: 6 RLKRELQ-LLNKEPPPGVICWQNESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPL 124 The following BLAST results are available for this feature:
BLAST of CV884827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884827 ID=CV884827; Name=CV884827; organism=Citrus sinensis; type=EST; length=862bpback to top |