CV884827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2S_XENTR (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis GN=ube2s PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.103e-16 Identity = 51/134 (38.06%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 198 VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA-ALLNNKEDY 596 + +++ KE+ S + S G+ P E I IEG +GT Y G +++ L D+P PP+ F T FHPNV G IC+++L+ W + R +LL+I+ LL PNPES LN A LL N E+Y Sbjct: 12 IIRQVYKEV-STLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSTNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.882e-16 Identity = 45/120 (37.50%), Postives = 70/120 (58.33%), Query Frame = 3 Query: 207 RLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL----QDKWSSAYDCRTILLSIQSLLGEPNPESPL 554 RL++EL ++ + G++ + + + + I GG T YE +KL + P YPF+PPQ++F T +HPN+D G ICLD+L + W + + T+L SIQ L+ EPNP+ PL Sbjct: 6 RLKREL-HMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPL 124
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UB2R1_MOUSE (Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.882e-16 Identity = 48/140 (34.29%), Postives = 73/140 (52.14%), Query Frame = 3 Query: 258 VSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-------------QDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-------NNKEDYRKMVQKQ 617 V+ EG+ ++ W I G T YEG +K L FP+DYP+ PP +F T +HPN+ + G++C+ IL ++W+ + RTILLS+ SLL EPN SP N A+ + +Y +++KQ Sbjct: 30 VTLVDEGD-LYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQ 168
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.882e-16 Identity = 48/140 (34.29%), Postives = 73/140 (52.14%), Query Frame = 3 Query: 258 VSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-------------QDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-------NNKEDYRKMVQKQ 617 V+ EG+ ++ W I G T YEG +K L FP+DYP+ PP +F T +HPN+ + G++C+ IL ++W+ + RTILLS+ SLL EPN SP N A+ + +Y +++KQ Sbjct: 30 VTLVDEGD-LYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQ 168
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.458e-16 Identity = 45/101 (44.55%), Postives = 62/101 (61.39%), Query Frame = 3 Query: 255 GVSAFPEGESIFTWIGTIEG-GKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 554 G+ A P+ + + I G K + +EG ++K L +YP P+V+F T +HPNVD+ I LDIL+DKWS A RT+LLSIQ+LL PNP+ PL Sbjct: 22 GIKAEPDESNARYFHVVIAGESKDSPFEGGTFKRELLLAEEYPMAAPKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPL 122
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2S_DICDI (Ubiquitin-conjugating enzyme E2 S OS=Dictyostelium discoideum GN=ube2s PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.458e-16 Identity = 54/136 (39.71%), Postives = 73/136 (53.68%), Query Frame = 3 Query: 198 VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA-ALLNNKEDYRK 602 V +R+ KEL L S + G++ P E I + G GT YEG +K L D+P PP+ F T FHPNV + G IC++ L+ W+ + ILL+I+ LL PN ES LN A+ LL N +DY K Sbjct: 10 VIKRVVKELKELNSSTLE-GITLLPCEEDITNIEAVVTGPAGTPYEGGYFKARLILSSDFPRSPPKANFITKIFHPNVSKKGEICVNTLKKDWTEDLGLKHILLTIKCLLIVPNAESSLNEDASRLLLENYDDYCK 144
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.458e-16 Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 3 Query: 330 YEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQKQYFAG 629 Y+G + S YP PP+VK ETM +HPN+D GN+CL+IL++ W +I+ +Q L EPNPE PLN AA +L NN+ + + VQ+ G Sbjct: 71 YKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 171
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.458e-16 Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 3 Query: 330 YEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQKQYFAG 629 Y+G + S YP PP+VK ETM +HPN+D GN+CL+IL++ W +I+ +Q L EPNPE PLN AA +L NN+ + + VQ+ G Sbjct: 71 YKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 171
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UB2SC_XENLA (Ubiquitin-conjugating enzyme E2 S-C OS=Xenopus laevis GN=ube2s-C PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.458e-16 Identity = 51/134 (38.06%), Postives = 72/134 (53.73%), Query Frame = 3 Query: 198 VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA-ALLNNKEDY 596 + +R+ KE+ S + S G+ P E I IEG +GT Y +++ L D+P PP+ F T FHPNV G IC+++L+ W + R +LL+I+ LL PNPES LN A LL N E+Y Sbjct: 12 IIRRVYKEV-STLTSDPPEGIKIIPNEEDITDVQVHIEGPEGTPYAAGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.193e-16 Identity = 52/144 (36.11%), Postives = 80/144 (55.56%), Query Frame = 3 Query: 192 TSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQDKWSSAYDCRTILLS-IQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQK 614 +S ++R + +LM LMMS D V +G F G K ++YEG +K+ + P YP+K P V F T +HPNVD+ G++CLD++ WS +D + + + LL PNP PLN AAAL + ++ Y + V++ Sbjct: 2 SSPSKRREMDLMKLMMS--DYKVEMINDGMQEF--FVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKE 141 The following BLAST results are available for this feature:
BLAST of CV884827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884827 ID=CV884827; Name=CV884827; organism=Citrus sinensis; type=EST; length=862bpback to top |