CV884827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.649e-12 Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = 3 Query: 330 YEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLN 581 Y+G +K + +YP PP+VK +HPN+D GN+CL+IL+ W+ + +IL+ +Q L PN E PLN AAA L+ Sbjct: 65 YKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAAADLH 148
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.812e-12 Identity = 38/96 (39.58%), Postives = 52/96 (54.17%), Query Frame = 3 Query: 306 IEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 593 I+G GT Y +++ L D+P PP+ F T FHPNV G IC++ L+ W + ILL+I+ LL PNPES LN A +L + D Sbjct: 50 IDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYD 145
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.812e-12 Identity = 38/96 (39.58%), Postives = 52/96 (54.17%), Query Frame = 3 Query: 306 IEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 593 I+G GT Y +++ L D+P PP+ F T FHPNV G IC++ L+ W + ILL+I+ LL PNPES LN A +L + D Sbjct: 50 IDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYD 145
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.812e-12 Identity = 38/96 (39.58%), Postives = 52/96 (54.17%), Query Frame = 3 Query: 306 IEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 593 I+G GT Y +++ L D+P PP+ F T FHPNV G IC++ L+ W + ILL+I+ LL PNPES LN A +L + D Sbjct: 50 IDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYD 145
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2S_DROGR (Ubiquitin-conjugating enzyme E2 S OS=Drosophila grimshawi GN=GH12079 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12 Identity = 47/141 (33.33%), Postives = 67/141 (47.52%), Query Frame = 3 Query: 171 SPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 593 SP T+ +++ KEL M S G+ + I+G GT Y +++ L D+P PP+ F T FHPNV G IC++ L+ W + ILL+I+ LL PNPES LN A +L + D Sbjct: 12 SPQTI------RQVMKELQD-MESTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYD 145
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.797e-12 Identity = 41/127 (32.28%), Postives = 69/127 (54.33%), Query Frame = 3 Query: 207 RLQKELMSLMMSGGDLGVSAFPEG-ESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNN 584 RL K++ L + +S FP G + + + +I+ G + G ++ + YP + P+VK +T +HPN+D GN+CL+IL++ W + T++ + L EPN E PLN AAA+L + Sbjct: 34 RLHKDISELNLPSS-CSIS-FPNGKDDLMNFEVSIKPDDGYYHNG-TFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRD 157
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2S_DROYA (Ubiquitin-conjugating enzyme E2 S OS=Drosophila yakuba GN=GE15576 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12 Identity = 38/96 (39.58%), Postives = 52/96 (54.17%), Query Frame = 3 Query: 306 IEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 593 I+G GT Y +++ L D+P PP+ F T FHPNV G IC++ L+ W + ILL+I+ LL PNPES LN A +L + D Sbjct: 50 IDGPAGTPYAAGVFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYD 145
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2S_DROVI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila virilis GN=GJ15767 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12 Identity = 45/141 (31.91%), Postives = 68/141 (48.23%), Query Frame = 3 Query: 171 SPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 593 SP T+ +++ KEL + + + G+ + I+G GT Y +++ L D+P PP+ F T FHPNV G IC++ L+ W + ILL+I+ LL PNPES LN A +L + D Sbjct: 12 SPQTI------RQVMKELQDMETTPPE-GIKVLINESDVTDIQAFIDGPAGTPYAVGVFRVKLTLSKDFPQTPPKAYFLTKIFHPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYD 145
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2S_DROMO (Ubiquitin-conjugating enzyme E2 S OS=Drosophila mojavensis GN=GI11085 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12 Identity = 45/141 (31.91%), Postives = 68/141 (48.23%), Query Frame = 3 Query: 171 SPNTVDTTSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 593 SP T+ +++ KEL + + + G+ + I+G GT Y +++ L D+P PP+ F T FHPNV G IC++ L+ W + ILL+I+ LL PNPES LN A +L + D Sbjct: 12 SPQTI------RQVMKELQDMETTPPE-GIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYD 145
BLAST of CV884827 vs. ExPASy Swiss-Prot
Match: UBE2S_DROER (Ubiquitin-conjugating enzyme E2 S OS=Drosophila erecta GN=GG18165 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12 Identity = 38/96 (39.58%), Postives = 52/96 (54.17%), Query Frame = 3 Query: 306 IEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 593 I+G GT Y +++ L D+P PP+ F T FHPNV G IC++ L+ W + ILL+I+ LL PNPES LN A +L + D Sbjct: 50 IDGPAGTPYAAGVFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYD 145 The following BLAST results are available for this feature:
BLAST of CV884827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884827 ID=CV884827; Name=CV884827; organism=Citrus sinensis; type=EST; length=862bpback to top |