CV884818
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884818 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.082e-56 Identity = 98/178 (55.06%), Postives = 123/178 (69.10%), Query Frame = -3 Query: 193 HETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 723 HETTGGW AP G Y+WGYCY R+ PG+ Y+GRGPIQ+++N NY G A+GV+LLNNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VI W PS D GR+PG+G+ TNIINGG+EC N + NRIGF+ +C G+ PG+NLDC+NQRP+G Sbjct: 69 HETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCANQRPFG 246
BLAST of CV884818 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 1.413e-56 Identity = 102/181 (56.35%), Postives = 121/181 (66.85%), Query Frame = -3 Query: 184 HETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVG-NDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNL 723 HETTGGW DAP G YAWGYCY+++++ QY GRGPIQL+WN NY CG+ L + LL P+L+ TDPV+SFK+AIWFWM Q PKPSCH VI W PSA D+ AGR+PGYG+ TNIINGGIECG G N A +RIGF+ +C G G NLDC QRP+G L Sbjct: 153 HETTGGWPDAPCGPYAWGYCYLKEINCQPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDCYQQRPFGYGL 333
BLAST of CV884818 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 1.413e-56 Identity = 100/178 (56.18%), Postives = 124/178 (69.66%), Query Frame = -3 Query: 196 HETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPG--QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 723 HETTGGW AP G Y+WGYC+ + + + P +YYGRGPIQ+T+N NY G+A+G DLLNNPDL+A+D +SFK+A WFWMT Q PKPSCH VI +W PSA+D AGR+PGYG TNIINGG+ECG+ +D V +RIGF+ +C G+ GDNLDC NQRPY Sbjct: 140 HETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 317
BLAST of CV884818 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 5.368e-56 Identity = 100/177 (56.50%), Postives = 123/177 (69.49%), Query Frame = -3 Query: 196 HETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 723 HETTGGW AP G +AWGYC+ ++ A+ PG+ YYGRGPIQL+ N NY G A+GVDLL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI +W PS D AGR PG+G+ TNIINGG+ECG+ + V +RIGF+ +C G+ GDNLDC NQRP+ Sbjct: 89 HETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPF 265
BLAST of CV884818 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.196e-55 Identity = 94/178 (52.81%), Postives = 127/178 (71.35%), Query Frame = -3 Query: 193 HETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGY-VGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 723 HETTGGW AP G +AWGYC + +++P+ YYGRGPIQLT NY G+ALG+DL+NNPDL+++DPV++F++AIWFWMTAQ PKPSCH+VI ++W PS +D ++GRLPGYG+ TNIINGG ECG D ++R+G++ +C F + GDN+ C +Q+PYG Sbjct: 90 HETTGGWATAPDGPFAWGYCRVNEITPSDPP-------------YYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIACRDQKPYG 254
BLAST of CV884818 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 215.698 bits (548), Expect = 2.040e-55 Identity = 98/177 (55.37%), Postives = 124/177 (70.06%), Query Frame = -3 Query: 196 HETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 723 HETTGGW AP G +AWGYC+ ++ S+ PG+ YYGRGPIQL+ N NY G A+GVDLL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI +W PS D AGR+PG+G+ TNI+NGGIECG+ + V +RIGF+ +C G+ G+NLDC +QRP+ Sbjct: 141 HETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 317
BLAST of CV884818 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.664e-55 Identity = 97/176 (55.11%), Postives = 123/176 (69.89%), Query Frame = -3 Query: 196 HETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 723 HETTGGW AP G YAWGYC++ + + +YYGRGPIQLT N NY G+A+ DL+NNPDLL+T+P +SFK+AIWFWMT Q KPS H+VI W PSA D +AGR+PGYG+ TNIINGGIECG+ ++ V +R+GF+ +C FG+ PG NLDC+NQR + Sbjct: 144 HETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNNQRSF 319
BLAST of CV884818 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.544e-55 Identity = 98/177 (55.37%), Postives = 123/177 (69.49%), Query Frame = -3 Query: 196 HETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 723 HETTGGW AP G +AWGYC+ ++ S+ PG+ YYGRGPIQL+ N NY G A+GVDLL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI +W PS D AGR+PG+G+ TNI+NGGIECG+ + V +RIGF+ +C + G+NLDC NQRP+ Sbjct: 144 HETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILRVGYGNNLDCYNQRPF 320
BLAST of CV884818 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.935e-55 Identity = 99/177 (55.93%), Postives = 123/177 (69.49%), Query Frame = -3 Query: 196 HETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 723 HETTGGW AP G +AWGYC+ ++ +S PG+ YYGRGPIQL+ N NY G A+GVDLL NPDL+ATD + FK+AIWFWMTAQPPKPS H VI +W PS D AGR+PG+G+ TNIINGGIECG+ + V +RIGF+ +C G+ G+NLDC +QRP+ Sbjct: 89 HETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 265
BLAST of CV884818 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.727e-54 Identity = 96/159 (60.38%), Postives = 116/159 (72.96%), Query Frame = -3 Query: 250 HETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCG 723 HETTGGW AP G YAWGYC++R+ PG+ Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VII W+PSA D A RLPG+G+ TNIINGG+ECG + V++RIGF+ +CG Sbjct: 143 HETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFYRRYCG 301 The following BLAST results are available for this feature:
BLAST of CV884818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884818 ID=CV884818; Name=CV884818; organism=Citrus sinensis; type=EST; length=728bpback to top |