EY665324
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 1.126e-66 Identity = 140/210 (66.67%), Postives = 153/210 (72.86%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE*GEELDPGYWWWKPWPKTLWNPKEAPPKF 667 ELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA+IIRKG MCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPIIVTGNDFSTLYAP + + G N+ +D V++VD FPGQS DFFGALRA++YD+ + G K K L N + PP F Sbjct: 180 ELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAED-VVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLL-NSFDGPPTF 387
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 2.509e-66 Identity = 131/181 (72.38%), Postives = 145/181 (80.11%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE 580 ELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA+IIRKG MCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPIIVTGNDFSTLYAP + + +G N+ ++ V++VD+FPGQS DFFGALRA++YD+ Sbjct: 175 ELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNV-PEEAVVKIVDSFPGQSIDFFGALRARVYDD 354
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 3.277e-66 Identity = 130/181 (71.82%), Postives = 145/181 (80.11%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE 580 ELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA+IIRKG +CCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPIIVTGNDFSTLYAP + + +G N+ ++ +++VDTFPGQS DFFGALRA++YD+ Sbjct: 180 ELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNICCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNV-PEEAVIKIVDTFPGQSIDFFGALRARVYDD 359
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 4.731e-65 Identity = 138/210 (65.71%), Postives = 152/210 (72.38%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE*GEELDPGYWWWKPWPKTLWNPKEAPPKF 667 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA+D+I+KGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+N RVPIIVTGNDFSTLYAP + + +G + D V+LVD PGQS DFFGALRA++YD+ + G K L N KE PP F Sbjct: 180 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMCVLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKD-IVELVDKHPGQSIDFFGALRARVYDDEVRKWISGV-GVDSVGKKLVNSKEGPPTF 387 HSP 2 Score: 72.0182 bits (175), Expect = 6.069e-12 Identity = 44/98 (44.90%), Postives = 57/98 (58.16%), Query Frame = 3 Query: 390 PLIRDGRMEKFYWAPTREDRIGVCKGIFQE*TCGLMXXXXXXXXXXXANPLISLEP*GP---KSMMNRGRNWIPGIGGGNLGQKPCGTQRKPPPNFQP 674 PLIRDGRMEKFYWAPTREDRIGVCKGIF+ T G+ +P S++ G + + R WI G+G ++G+K ++ PP QP Sbjct: 297 PLIRDGRMEKFYWAPTREDRIGVCKGIFR--TDGV--PEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQP 390
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 8.923e-64 Identity = 130/189 (68.78%), Postives = 144/189 (76.19%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQ-----GYLPGM---NMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE 580 ELVFAK+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC L INDL+ GAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK++N RVPIIVTGNDFSTLYAP ++ YW G G+ + +H V+LVD FPGQS DFFGALRA++Y + Sbjct: 174 ELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAP---------LIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHD 353
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.630e-57 Identity = 118/180 (65.56%), Postives = 133/180 (73.89%), Query Frame = 2 Query: 41 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE 580 L + K+GI PI+MSAGELESGNAGEPAKLIR RYREA+DII+KG+MC L INDLDAGAGRMG TTQYTVNNQMVNATLMNIADNPT VQLPG+Y EE PRVPI+ TGNDFSTLYAP + + G N+ + LVDTFPGQS DFFGALRA++YD+ Sbjct: 150 LAYKKLGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRMCSLFINDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRRE-VENLVDTFPGQSIDFFGALRARVYDD 328
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA_ANASC (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain CA / ATCC 33047) GN=rca PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 2.208e-46 Identity = 104/182 (57.14%), Postives = 124/182 (68.13%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYDE 580 EL F KMG+ ++S GELES +AG+PA+LIR RYRE A++I+ +GKMC LMINDLDAGAGR TQYTVN Q+VNATLMNIADNPT VQLPG Y+ RVPIIVTGNDFSTLYAP + ++ V G + D +LVD+FP QS DFF ALR++IYDE Sbjct: 48 ELAFEKMGVEVTLISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRD-VEKLVDSFPNQSIDFFSALRSRIYDE 228
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA_ANASP (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain PCC 7120) GN=rca PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.766e-46 Identity = 105/181 (58.01%), Postives = 121/181 (66.85%), Query Frame = 2 Query: 38 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALRAKIYD 577 EL F KMGI ++S GELES +AG+PA+LIR RYRE A++I+ +GKMC LMINDLDAGAGR TQYTVN Q+VNATLMNIADNPT VQLPG Y+ RVPIIVTGNDFSTLYAP + + V G + QLVDTFP QS DFF ALR++IYD Sbjct: 48 ELAFEKMGIEVTLISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPNRDDKVGIVGGIFAEDGL-SQREIEQLVDTFPKQSIDFFSALRSRIYD 227
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.081e-20 Identity = 73/170 (42.94%), Postives = 75/170 (44.12%), Query Frame = 2 Query: 53 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPSHP*WSYGEILLGTYKGGPYWCVQGYLPGMNMWVDDHFVQLVDTFPGQSFDFFGALR 562 KMGINPIMMSAGELESGNAGEPA KMCCL INDLDAGAG RVPIIVTGNDFSTLYAP I +G G +LVDTFPGQS DFFGALR Sbjct: 57 KMGINPIMMSAGELESGNAGEPA-----------------KMCCLFINDLDAGAG-----------------------------------------RVPIIVTGNDFSTLYAPL--------IRIGVCTG--------------------IFRLVDTFPGQSIDFFGALR 140
BLAST of EY665324 vs. ExPASy Swiss-Prot
Match: RCA_VITSX (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.724e-12 Identity = 40/69 (57.97%), Postives = 44/69 (63.77%), Query Frame = 2 Query: 29 SNPELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTT 235 S+ + +MGINPIMMSAGELESGNAGEPA KMCCL INDLDAGAGR+G T Sbjct: 7 SDDQQDITRMGINPIMMSAGELESGNAGEPA-----------------KMCCLFINDLDAGAGRIGVCT 58 The following BLAST results are available for this feature:
BLAST of EY665324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665324 ID=EY665324; Name=EY665324; organism=Citrus sinensis; type=EST; length=1002bpback to top |