CV884781 | Citrus Genome Database

Overview


Name	CV884781
Unique Name	CV884781
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	900

Libraries


Library Name	Type
Ruby Orange Developing Flower cDNA Library UCRCS04-UCR	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig9569	contig	Csv1_Contig9569:16..916.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CV884781 vs. ExPASy Swiss-Prot
Match: UBIQ_ARATH (Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.142e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   44 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 271
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 150.599 bits (379), Expect = 1.142e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  272 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 499
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 150.599 bits (379), Expect = 1.142e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  500 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 727
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 113.235 bits (282), Expect = 2.021e-24
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 2

Query:  728 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 898
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 57

[Close]

BLAST of CV884781 vs. ExPASy Swiss-Prot
Match: UBIQ_COPCO (Ubiquitin OS=Coprinus congregatus PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.545e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   44 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 271
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 149.443 bits (376), Expect = 2.545e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  272 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 499
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 149.443 bits (376), Expect = 2.545e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  500 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 727
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 112.079 bits (279), Expect = 4.503e-24
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 2

Query:  728 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 898
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 57

[Close]

BLAST of CV884781 vs. ExPASy Swiss-Prot
Match: UBIQ_CHLRE (Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.324e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   44 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 271
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 149.058 bits (375), Expect = 3.324e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  272 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 499
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 149.058 bits (375), Expect = 3.324e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  500 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 727
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 111.694 bits (278), Expect = 5.881e-24
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 2

Query:  728 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 898
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 57

[Close]

BLAST of CV884781 vs. ExPASy Swiss-Prot
Match: UBIQ_YEAST (Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.670e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   44 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 271
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 5.670e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  272 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 499
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 148.288 bits (373), Expect = 5.670e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  500 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 727
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 110.923 bits (276), Expect = 1.003e-23
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 2

Query:  728 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 898
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 57

[Close]

BLAST of CV884781 vs. ExPASy Swiss-Prot
Match: UBIQ_SCHPO (Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.670e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   44 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 271
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 5.670e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  272 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 499
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 148.288 bits (373), Expect = 5.670e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  500 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 727
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 110.923 bits (276), Expect = 1.003e-23
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 2

Query:  728 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 898
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 57

[Close]

BLAST of CV884781 vs. ExPASy Swiss-Prot
Match: UBIQ_KLULA (Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.670e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   44 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 271
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 5.670e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  272 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 499
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 148.288 bits (373), Expect = 5.670e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  500 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 727
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 110.923 bits (276), Expect = 1.003e-23
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 2

Query:  728 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 898
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 57

[Close]

BLAST of CV884781 vs. ExPASy Swiss-Prot
Match: UBIQ_CRYNE (Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.670e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   44 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 271
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 5.670e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  272 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 499
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 148.288 bits (373), Expect = 5.670e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  500 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 727
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 110.923 bits (276), Expect = 1.003e-23
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 2

Query:  728 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 898
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 57

[Close]

BLAST of CV884781 vs. ExPASy Swiss-Prot
Match: UBIQ_CANAL (Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.670e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:   44 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 271
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.288 bits (373), Expect = 5.670e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  272 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 499
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 148.288 bits (373), Expect = 5.670e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2

Query:  500 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 727
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 110.923 bits (276), Expect = 1.003e-23
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 2

Query:  728 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 898
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 57

[Close]

BLAST of CV884781 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.405e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 2

Query:   44 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 271
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.902 bits (372), Expect = 7.405e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  272 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 499
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 147.902 bits (372), Expect = 7.405e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  500 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 727
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 110.538 bits (275), Expect = 1.310e-23
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 2

Query:  728 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 898
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLA
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLA 57

[Close]

BLAST of CV884781 vs. ExPASy Swiss-Prot
Match: UBIQ_NEUCR (Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.671e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 2

Query:   44 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 271
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.517 bits (371), Expect = 9.671e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  272 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 499
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 147.517 bits (371), Expect = 9.671e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  500 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 727
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 110.153 bits (274), Expect = 1.711e-23
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 2

Query:  728 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 898
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 57

The following BLAST results are available for this feature:

BLAST of CV884781 vs. ExPASy Swiss-Prot

BLAST of CV884781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_ARATH	1.142e-35	100.00	Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=...	[more]
UBIQ_COPCO	2.545e-35	98.68	Ubiquitin OS=Coprinus congregatus PE=1 SV=1	[more]
UBIQ_CHLRE	3.324e-35	98.68	Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=...	[more]
UBIQ_YEAST	5.670e-35	97.37	Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1...	[more]
UBIQ_SCHPO	5.670e-35	97.37	Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=...	[more]
UBIQ_KLULA	5.670e-35	97.37	Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=...	[more]
UBIQ_CRYNE	5.670e-35	97.37	Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 ...	[more]
UBIQ_CANAL	5.670e-35	97.37	Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1	[more]
UBL1_ORYSJ	7.405e-35	97.37	Ubiquitin-like protein 1 OS=Oryza sativa subsp. ja...	[more]
UBIQ_NEUCR	9.671e-35	97.37	Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS04_2_010E10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T7_E10, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV884781 ID=CV884781; Name=CV884781; organism=Citrus sinensis; type=EST; length=900bp
CTTCCTTTATTCGATAAAGGCCTCCTTCTGTTCTCTCTGTCAGATGCAAA
TCTTTGTGAAAACTCTCACCGGCAAGACAATAACCCTTGAGGTTGAAAGC
TCCGACACCATTGATAATGTAAAAGCCAAGATCCAGGACAAGGAAGGGAT
CCCACCAGATCAGCAGAGGCTTATCTTTGCTGGTAAACAGCTCGAGGATG
GTCGCACACTTGCTGACTATAATATCCAGAAGGAATCAACCCTCCACTTG
GTCCTTCGACTTAGGGGTGGTATGCAGATCTTTGTAAAGACCCTCACTGG
CAAGACGATTACTCTTGAGGTGGAAAGCTCCGACACCATTGACAATGTGA
AAGCCAAGATTCAAGACAAGGAAGGGATCCCACCAGACCAACAGAGACTT
ATCTTTGCCGGTAAACAGCTCGAGGATGGTCGCACACTTGCTGATTATAA
CATCCAGAAGGAGTCAACCCTCCACTTGGTCCTCCGTCTCCGTGGTGGTA
TGCAGATCTTTGTAAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTG
GAAAGCTCCGACACCATTGACAATGTCAAAGCCAAAATTCAGGATAAGGA
AGGGATCCCACCAGACCAGCAAAGGCTCATCTTTGCTGGTAAACAACTAG
AGGATGGACGCACACTTGCAGACTACAACATCCAGAAGGAATCAACCCTT
CATTTGGTCCTCCGTCTCAGGGGTGGCATGCAGATTTTTGTGAAAACCCT
GACCGGTAAGACTATAACTTTGGAGGTTGAAAGCTCTGACACGATCGACA
ATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCTGATCAACAG
AGGTTAATCTTTGCCGGCAAACAACTTGAAGATGGGCGTACTCTTGCTGA