EY665322
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 9.105e-45 Identity = 103/190 (54.21%), Postives = 124/190 (65.26%), Query Frame = 1 Query: 49 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGGAP 597 +T A+ AFAG+ N V GR+TMR+TV K S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGE++ W FK ++ G DYL P ++ AIW ++ L G G ++ G P Sbjct: 4 STMALSSPAFAGKAV----NLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAV----W-FKAGSQIFSDGGLDYLGNPSLVH-AQSILAIWA-TQVILMGAVEGYRVAGNGP 182
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.189e-44 Identity = 102/186 (54.84%), Postives = 127/186 (68.28%), Query Frame = 1 Query: 49 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKS-APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 +T A+ A AG+ A++ + G GR++MR+TVK+ S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGE++ W FK ++ G DYL P ++ +IW ++ L G G ++ GG Sbjct: 4 STMALSSPALAGK-AVKVAPSSSELFG---NGRVSMRKTVKAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAV----W-FKAGSQIFSEGGLDYLGNPSLVH-AQSILSIWA-TQVILMGAVEGYRVAGG 178
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.460e-44 Identity = 102/189 (53.97%), Postives = 126/189 (66.67%), Query Frame = 1 Query: 49 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 +T A+ +FAG+ A++ S G G++TMR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGE++ W FK ++ G DYL P ++ AIW ++ L G G ++ GG Sbjct: 4 STMALSSPSFAGK-AVKLSPSSSEITG---NGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV----W-FKAGSQIFSEGGLDYLGNPSLVH-AQSILAIWA-CQVVLMGAVEGYRVAGG 181
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.460e-44 Identity = 99/188 (52.66%), Postives = 122/188 (64.89%), Query Frame = 1 Query: 52 TSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAP----QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 T A+ S+FAG+ S+ + G++TMR+TV A S WYGPDR KYLGPFS + PSYLTGEFP DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+ ++NG+KFGE++ W FK ++ G DYL P ++ AIW ++ L G G ++ GG Sbjct: 5 TMALSSSSFAGKAVKLSSSSSE----ITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAV----W-FKAGAQIFSEGGLDYLGNPSLVH-AQSILAIWA-CQVVLMGAVEGYRVAGG 181
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 4.519e-44 Identity = 97/156 (62.18%), Postives = 113/156 (72.44%), Query Frame = 1 Query: 142 GRITMRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 GR++MR+TV + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGE++ W FK ++ G DYL P ++ AIW ++ L G G +I GG Sbjct: 29 GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAV----W-FKAGSQIFSEGGLDYL-GNPSLIHAQSILAIWA-TQVILMGAVEGYRIAGG 177
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 4.519e-44 Identity = 100/184 (54.35%), Postives = 125/184 (67.93%), Query Frame = 1 Query: 49 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAP----QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKVGFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWG 588 +T A+ S+FAG+ A++ S G G++TMR+T A S WYGP+R KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGE++ G +S + G DYL P ++ AIW ++ L G G ++ G Sbjct: 4 STMALSSSSFAGK-AVKLSPSSSEITG---NGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFS-QGGLDYLGNPSLVH-AQSILAIWA-CQVVLMGAVEGYRVAG 180
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 7.708e-44 Identity = 101/190 (53.16%), Postives = 124/190 (65.26%), Query Frame = 1 Query: 49 ATSAIQQSAFAGQTA-LRQSNEFVRKVGVADGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 AT A+ S+FAG+ + S+E R G++TMR+TV A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIH RW MLGALGCVFPE+ ++NGVKFGE++ W FK ++ G DYL P ++ AIW ++ L G G ++ GG Sbjct: 4 ATMALSSSSFAGKAVNVPSSSEITRN------GKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAV----W-FKAGSQIFKEGGLDYLGNPSLVH-AQSILAIWA-CQVVLMGAVEGYRVAGG 180
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.007e-43 Identity = 107/195 (54.87%), Postives = 130/195 (66.67%), Query Frame = 1 Query: 46 MATSAI-QQSAFAGQ--TALRQSNEFVRKVGVADG-GRITMRRTV--KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 MA+ I + AFAG ++++ N + VG A G R+TMR+ KS SI WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGE++ W FK ++ G DYL P ++ AIW ++ L G G ++ GG Sbjct: 5 MASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAV----W-FKAGAQIFSEGGLDYL-GSPQLIHAQSILAIWA-CQVILMGAIEGYRVAGG 192
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.007e-43 Identity = 102/188 (54.26%), Postives = 124/188 (65.96%), Query Frame = 1 Query: 49 ATSAIQQSAFAGQTA--LRQSNEFVRKVGVADGGRITMRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 AT A+ S FAG+ L S+E V R++MR+T + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGE++ W FK ++ G YL P ++ AIW ++ L G G ++ GG Sbjct: 4 ATMALSSSTFAGKAVKNLSSSSE------VQGDARVSMRKTAATKKVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAV----W-FKKGSQIFSEGGLQYLGNPSLVH-AQSILAIWA-CQVVLMGAVEGYRVAGG 178
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.007e-43 Identity = 102/189 (53.97%), Postives = 125/189 (66.14%), Query Frame = 1 Query: 49 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 A++ S FAG+ A++ S G G++TMR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGE++ W FK ++ G DYL P ++ AIW ++ L G G ++ GG Sbjct: 3 ASTTALSSPFAGK-AVKLSPSSSEVTG---NGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV----W-FKAGSQIFSEGGLDYLGNPSLVH-AQSILAIWA-CQVVLMGAVEGYRVAGG 180 The following BLAST results are available for this feature:
BLAST of EY665322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY665322 ID=EY665322; Name=EY665322; organism=Citrus sinensis; type=EST; length=988bpback to top |