EY665322
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 6.525e-43 Identity = 101/190 (53.16%), Postives = 121/190 (63.68%), Query Frame = 1 Query: 49 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQ-----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 +T A+ +AFAG+ S+ F R+TMR+T A S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGE++ W FK ++ G DYL P ++ AIW ++ L G G +I GG Sbjct: 4 STMALSSTAFAGKAVNVPSSSFGE-------ARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV----W-FKAGSQIFSEGGLDYL-GNPSLIHAQSILAIWA-CQVVLMGAVEGYRIAGG 179
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.113e-42 Identity = 102/193 (52.85%), Postives = 126/193 (65.28%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQS---NEFVRKVGVADGGRITMRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 MA S+ A + T + N +++G A R TMR++ + + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGE++ W FK ++ G DYL P ++ AIW ++ L G G +I GG Sbjct: 1 MAASSSSSMALSSPTLAGKQLKLNPSSQELGAA---RFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAV----W-FKAGSQIFSEGGLDYLGNPSLVH-AQSILAIWA-TQVILMGAVEGYRIAGG 183
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 1.113e-42 Identity = 102/189 (53.97%), Postives = 121/189 (64.02%), Query Frame = 1 Query: 49 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 AT A+ A AG+ A + E GRITMR++ +A S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGE++ W FK ++ G DYL P ++ AIW ++ L G G +I GG Sbjct: 4 ATMALSSPALAGKAAAKVFGE----------GRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAV----W-FKAGSQIFSEGGLDYL-GNPSLIHAQSILAIWA-VQVVLMGAVEGYRIAGG 175
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.454e-42 Identity = 103/195 (52.82%), Postives = 121/195 (62.05%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADG----GRITMRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 MA+ I AFAG + +GV G R+TMR+ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGE++ W FK ++ G DYL P ++ AIW ++ L G G +I GG Sbjct: 1 MASCGIGSCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV----W-FKAGAQIFSEGGLDYLGNPSLVH-AQSILAIWA-CQVILMGAVEGYRIAGG 188
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 4.230e-42 Identity = 94/156 (60.26%), Postives = 109/156 (69.87%), Query Frame = 1 Query: 142 GRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 GR++MR+T S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGE + W FK ++ G DYL ++ AIW ++ L G G +I GG Sbjct: 11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE----ASW-FKAGSQIFSEGGLDYL-GNQSLIHAQSILAIWA-TQVILMGAVEGYRIAGG 159
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.607e-41 Identity = 100/188 (53.19%), Postives = 121/188 (64.36%), Query Frame = 1 Query: 52 TSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 T ++ S+FAG+ + + +G A R+ MR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGE +GW FK ++ G DYL P ++ AIW ++ L G G +I GG Sbjct: 5 TMSLSSSSFAGKAVKNLPSSAL--IGDA---RVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE----AGW-FKAGSQIFSDGGLDYLGNPSLVH-AQSLLAIWA-CQVVLMGAVEGYRIAGG 180
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.042e-40 Identity = 89/144 (61.81%), Postives = 105/144 (72.92%), Query Frame = 1 Query: 172 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 ++ S W+GPD KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGE++ W FK ++ G DYL P ++ AIW ++ L G G +I GG Sbjct: 6 ASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAV----W-FKAGSQIFSEGGLDYLGNPSLVH-AQSILAIWA-TQVILMGAVEGYRIAGG 142
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 1.777e-40 Identity = 93/158 (58.86%), Postives = 109/158 (68.99%), Query Frame = 1 Query: 145 RITMRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 RITMR+T ++ S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGE++ W FK ++ G DYL P ++ AIW ++ L G G +I GG Sbjct: 29 RITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAV----W-FKAGSQIFSEGGLDYL-GNPSLIHAQSILAIWA-VQVVLMGAVEGYRIAGG 179
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 4.097e-37 Identity = 82/132 (62.12%), Postives = 91/132 (68.94%), Query Frame = 1 Query: 115 VRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK-NGVKFGESILGSGWRFKYSPKV----GFDYLWPP 495 +R + A GRITM +WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L K GV+F E + W FK ++ G DYL P Sbjct: 32 LRDIAAATNGRITMGN-------DLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPV----W-FKAGSQIFSEGGLDYLGNP 151
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.557e-36 Identity = 96/187 (51.34%), Postives = 108/187 (57.75%), Query Frame = 1 Query: 49 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTV-KSAPQ---SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKVGFDYLWPPPPPFLLKA--FWAIWGPARLCLWGFC*GKKIWGG 591 AT AI A G+ A + F GRITMR+T K P S WYG DR YLGP S PSYLTGEFPGDYGWDT GLSADPETFAKNRELEVIH RWA+ LGCVFPE+L++NGVKFGE + W S L P P L+ A AIW ++ L G G + GG Sbjct: 4 ATMAITSRALVGKPAAGTRDVFGE-------GRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGV----WFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWA-CQVVLMGAVEGYHVAGG 178 The following BLAST results are available for this feature:
BLAST of EY665322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665322 ID=EY665322; Name=EY665322; organism=Citrus sinensis; type=EST; length=988bpback to top |