EY665322
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.916e-36 Identity = 85/154 (55.19%), Postives = 99/154 (64.29%), Query Frame = 1 Query: 49 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK-NGVKFGESILGSGWRFKYSPKV----GFDYLWPP 495 +T+ ++ + F GQT + +N +R V R TM +WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+L K V F E + W FK ++ G DYL P Sbjct: 10 STTVVKATPFLGQT--KNANP-LRDVVAMGSARFTMSN-------DLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPV----W-FKAGSQIFSDGGLDYLGNP 148
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.936e-35 Identity = 95/190 (50.00%), Postives = 120/190 (63.16%), Query Frame = 1 Query: 49 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 +T A+ S+ AGQ + ++GV GR++MR+T AP+++ WYGPDR KYLGPFS + PSYLTGEF G LSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGE++ W FK ++ G DYL P ++ AIW ++ L G G +I GG Sbjct: 4 STMALSSSSLAGQAMKLAPS--TPELGV---GRVSMRKT---APKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAV----W-FKAGSQIFSEGGLDYL-GNPSLIHAQSILAIWA-TQVILMGAVEGYRIAGG 170
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 9.444e-34 Identity = 79/127 (62.20%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 223 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 PFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS WAMLGALGCVFPE+LS+NGVKFGE++ W FK ++ G DYL P ++ AIW ++ L G G +I GG Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAV----W-FKAGSQIFSEGGLDYLGNPSLVH-AQSILAIWA-CQVVLMGAVEGYRIAGG 120
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.589e-33 Identity = 78/126 (61.90%), Postives = 88/126 (69.84%), Query Frame = 1 Query: 133 ADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK-NGVKFGESILGSGWRFKYSPKV----GFDYLWPP 495 A G + T KSA WYGPDR K+LGPFS TP+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH+RWA+LGALG + PE+LS GVKFGE + W FK ++ G DYL P Sbjct: 21 AAGTKQTKAAPAKSAGIE-WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPV----W-FKAGAQIFSEGGLDYLGSP 140
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.781e-32 Identity = 72/116 (62.07%), Postives = 89/116 (76.72%), Query Frame = 1 Query: 172 SAPQSI---WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPP 495 +AP+S +YGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAMLGALGC PE+L+K+G KFGE++ W FK ++ G DYL P Sbjct: 27 AAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAV----W-FKAGAQIFSEGGLDYLGNP 137
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.411e-29 Identity = 63/100 (63.00%), Postives = 82/100 (82.00%), Query Frame = 1 Query: 145 RITMRRTVKSAPQSI--WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK-NGVKFGESI 432 R T ++ + + P++ +YGPDR K+LGPFSE TP YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH+RWA+LGALG + PE+LS+ GV+FGE + Sbjct: 16 RQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPV 115
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.407e-29 Identity = 76/133 (57.14%), Postives = 88/133 (66.17%), Query Frame = 1 Query: 205 RPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGESILGSGWRFKYSPKV----GFDYLWPPPPPFLLKAFWAIWGPARLCLWGFC*GKKIWGG 591 R KYLGPFS + PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIHSR AM ALGC+FPE+LS G FGE++ W FK ++ G DYL P ++ AIW ++ L G G +I G Sbjct: 58 RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAV----W-FKAGAQIFSEGGLDYLGNPSLVH-AQSILAIW-TTKVILMGAVEGYRIARG 183
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.014e-19 Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 1 Query: 172 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILS-KNGVKFGESILGSGWRFKYSPKV----GFDYLWPP 495 S+ + +YGPD Q P TGEFPGDYGWDTAGLSADPETF + RELE+IH+R +LGALG V PE+L+ ++G+KFG++ + W FK + G +YL P Sbjct: 51 SSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAI---W-FKAGAAIFQDGGLNYLGNP 158
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.160e-15 Identity = 41/81 (50.62%), Postives = 49/81 (60.49%), Query Frame = 1 Query: 190 WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFG 423 WYGPDR +L + P YL GE GDYG+D GL PE FAK + E+IH+RWAMLGA G + PE L+K G G Sbjct: 62 WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCG 142
BLAST of EY665322 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.159e-13 Identity = 46/116 (39.66%), Postives = 64/116 (55.17%), Query Frame = 1 Query: 67 QSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV 414 +++F G LR S +F+ VG R+V A ++ PDRP + P +L G PGD+G+D GL +DPE+ N + E++HSRWAMLGA G PE L+K GV Sbjct: 31 KASFLGGKRLRVS-KFIAPVG---------SRSV--AVSAVAADPDRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV 132 The following BLAST results are available for this feature:
BLAST of EY665322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665322 ID=EY665322; Name=EY665322; organism=Citrus sinensis; type=EST; length=988bpback to top |