CV884767

Overview
NameCV884767
Unique NameCV884767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.899e-20
Identity = 72/232 (31.03%), Postives = 111/232 (47.84%), Query Frame = 1
Query:  208 RAGIAEFMATFLFLYITVLTVMGVSKSNTK--CSTVG---IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNA------RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAV 870
            R+ +AEF++TFLF++  V + +      T    S+ G      +A AFG  +FA V   A +SGGH+NPAVTF   +  ++ +  A+FY   Q LGA      +  F   +           +A   T   G   E + TF+LVYTV    + +  +      R+     L  L +G       LA   +TG  +NPARS G A++      + +  ++W GP +GAA+AA+
Sbjct:   20 RSYLAEFISTFLFVFTAVGSAISARMLTTPDVTSSAGPLVATAVAQAFG--LFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAGEEVP-----TTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARSFGPAVVSGH---FKNQAVYWAGPMVGAAVAAL 241          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.356e-20
Identity = 72/226 (31.86%), Postives = 106/226 (46.90%), Query Frame = 1
Query:  208 RAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAW-AFGGMIFALVYCTAG--ISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALA 864
            RA +AE + TFLF++  V   M           + +  +A  A    + A V  TAG  +SGGH+NPAVT G+L+   ++  RA+ Y+  Q L +     +++          L GG     H    G     GL  E+I TF L++  ++     R    S V  + PL  G  V    LA    TG  +NPARS G A+       W +HW++W+GP +G +LA
Sbjct:   26 RAVLAELVLTFLFVFTGVSASMAAGAGGKPGEAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLR---------YLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDPR----SQVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMATG---VWTNHWVYWIGPLLGGSLA 235          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.091e-19
Identity = 72/233 (30.90%), Postives = 107/233 (45.92%), Query Frame = 1
Query:  181 GELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAW-AFGGMIFALVYCTAG--ISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAV 870
            GE+      RA +AE + TF+F++  V   M         + + +  +A  A    + A V  TAG  +SGGH+NPAVT  LL    ++  R+  Y+  Q L +     +++   G      +    + +  G     GL  EII TF L++ V++     R    S VP   PL  G  V    +A    +G  +NPARS G A+       W  HWI+W+GP IG  LA +
Sbjct:   11 GEVVDAGCVRAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGG-----MATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPR----SSVPGFGPLLTGLIVGANTIAGGNFSGASMNPARSFGPALATG---VWTHHWIYWLGPLIGGPLAGL 231          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.861e-19
Identity = 75/240 (31.25%), Postives = 109/240 (45.42%), Query Frame = 1
Query:  172 FEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAG--ISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVFSA-TDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAV 870
            +EPG L      RA   E + TFLF++I V + +   K+            A A    +   V  TAG  +SGGH+NPAVT  L +   ++L R+  Y+  Q  G+     +++          L GGA    H    G     G+ AE + TF L+  + +   D +R A     P+L  L +G       +A   +TG  +NPARS G A+   +   W  HW++WVGP  G  LA V
Sbjct:   18 WEPGCL------RAVAGELLFTFLFVFIGVASTITAGKAAGGAGEAAAVTAA-AMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLR---------CLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANT----VAGGALTGASMNPARSFGPALATGE---WAHHWVYWVGPLAGGPLAVV 234          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.861e-19
Identity = 73/235 (31.06%), Postives = 111/235 (47.23%), Query Frame = 1
Query:  217 IAEFMATFLFLY-------ITVLTVMGVSKSNTKCSTVGIQG-------IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI---IFNKDHAWDDHWIFWVGPFIGAALAAV 870
            IAEF+ TF+ ++       +T++   G +  N     +G+ G       I  AFG  I A +Y    ISG HINPAVT GL   +K      V Y++ Q LGA  G+ +     G       G GA     G +    + AE++GTF+L+ T+      +R  +       A + IG  V  +      I+G+ +NPAR+ G  +   IF     W+ + I+ +GP +GA LAA+
Sbjct:    9 IAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKG-----FAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAAL 238          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP8_RAT (Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.416e-19
Identity = 67/222 (30.18%), Postives = 104/222 (46.85%), Query Frame = 1
Query:  193 SW--SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGA-NVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFI 849
            SW   + +  + E + + LF++I  L+V+  S +       G+   A A G  +  ++     ISGGH NPAV+  + L   L     + Y V Q  G + GA + K     + +    G A  +V       + LG EI+ T +LV  V           +  +  LAP  IGF+V +  LA   I+G  +NPAR+ G A++      WD HWI+W+GP +
Sbjct:   31 SWYEQYIQPCVVELLGSALFIFIGCLSVIENSPNT------GLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTLVGGLKTMLLIPYWVSQLFGGMIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGVEIVMTMLLVLAVCMGA-----VNEKTMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVMAG---YWDFHWIYWLGPLL 238          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP8_NOTAL (Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.058e-18
Identity = 66/222 (29.73%), Postives = 103/222 (46.40%), Query Frame = 1
Query:  193 SW--SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGA-NVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFI 849
            SW   + +  + E + + LF++I  L+V+  S         G+   A A G  +  ++     ISGGH NPAV+  + +   L     + Y + Q  G + GA + K     + +    G A  +V       + LG EII T +LV  V           +  +  LAP  IGF+V +  LA   I+G  +NPAR+ G A++      WD HWI+W+GP +
Sbjct:   29 SWYEQYIQPCVVELLGSALFIFIGCLSVIENSPDT------GLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQIFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVTEALGVEIILTILLVLAVCMGA-----VNEKTMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVVAG---YWDFHWIYWLGPLL 236          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.058e-18
Identity = 65/212 (30.66%), Postives = 100/212 (47.17%), Query Frame = 1
Query:  217 IAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGA-NVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFI 849
            I E + + LF++I  L+V+  S +       G+   A A G  +  ++     ISGGH NPAV+  + +   L     + Y + Q  G + GA + K     + +    G A  +V       + LG EII T +LV  V           +  +  LAP  IGF+V +  LA   I+G  +NPAR+ G A++      WD HWI+W+GP +
Sbjct:   39 IVELVGSALFIFIGCLSVIENSPNT------GLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGIEIILTMLLVLAVCMGA-----VNEKTMGPLAPFSIGFSVIVDILAGGSISGACMNPARAFGPAVMAG---YWDFHWIYWLGPLL 236          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.988e-18
Identity = 78/261 (29.89%), Postives = 123/261 (47.13%), Query Frame = 1
Query:   88 ANKFSERQPIGTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVY-TVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAA 867
            +N+  +   +         Y E   A  F P  LK        ++E +ATFL +++T     G+S S+   S +   G + A G ++  ++Y    ISG H+NPAVT    + R     +  FY   Q  GAIC + V+K        + +G    V  H ++    L  E+I TF +++ T+  ATD +       V  LA L +G AV +  +    I+G  +NPAR+LG A+  NK   +D  WI+++GP +G    A
Sbjct:   15 SNEIHDLSTVQNGTMPTMYYGEKAIADFFPPHLLKKV------VSEVVATFLLVFMTC-GAAGISGSDL--SRISQLGQSIAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGAICASFVLKAV--IHPVDVIGTTTPVGPHWHS----LVVEVIVTFNMMFVTLAVATDTRA------VGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPALASNK---FDGLWIYFLGPVMGTLSGA 251          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQPM_METTH (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum GN=aqpM PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.334e-17
Identity = 73/235 (31.06%), Postives = 107/235 (45.53%), Query Frame = 1
Query:  217 IAEFMATFLFLY-------ITVLTVMGVSKSNTKCSTVGIQG-------IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI---IFNKDHAWDDHWIFWVGPFIGAALAAV 870
            IAEF+ TF  ++       IT++   G +  N     +G+ G       I  AFG  I A +Y    ISG HINPAVT GL   +K      V Y++ Q LGA   + +     G       G GA     G      + AE +GTF+L+ T+      +R  +       A + IG  V  +      ITG+ +NPAR+ G  +   +F   + W+   I+ +GP +GA LAA+
Sbjct:    9 IAEFIGTFFLVFFGAGAAAITLMIASGGTAPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGRDVVPYIIAQLLGAAFASFIFLQCAGITAATIGGLGATAPFPGIGYWQAMLAETVGTFLLMITIMGIAVDERAPKG-----FAGIIIGLTVAGIITTIGNITGSSLNPARTFGPYLNDMVFAGTNLWNYFPIYVIGPVVGAVLAAL 238          
The following BLAST results are available for this feature:
BLAST of CV884767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 206
Match NameE-valueIdentityDescription
TIP51_MAIZE4.899e-2031.03Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1[more]
TIP42_MAIZE8.356e-2031.86Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1[more]
TIP41_ORYSJ1.091e-1930.90Probable aquaporin TIP4-1 OS=Oryza sativa subsp. j... [more]
TIP42_ORYSJ1.861e-1931.25Probable aquaporin TIP4-2 OS=Oryza sativa subsp. j... [more]
AQPM_METTM1.861e-1931.06Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
AQP8_RAT5.416e-1930.18Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1[more]
AQP8_NOTAL2.058e-1829.73Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1[more]
AQP8_MOUSE2.058e-1830.66Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]
NIP21_ORYSJ5.988e-1829.89Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica G... [more]
AQPM_METTH1.334e-1731.06Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010E01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T7_E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884767 ID=CV884767; Name=CV884767; organism=Citrus sinensis; type=EST; length=870bp
AAAAGCATCTTCTTTGAGAGAATAAGAGAGCGAGAGAGAGGTTCATCATC
GTCAATGGAAGGCAAAGAAGAGGATGTTAAGCTAGGAGCTAACAAGTTCT
CAGAGAGGCAACCCATTGGGACATCAGCTCAATCAGACAAAGACTACAAG
GAGCCACCACCAGCACCTTTGTTTGAGCCTGGTGAGCTCAAGTCATGGTC
TTTTTACAGAGCTGGTATTGCAGAGTTCATGGCTACCTTCTTGTTCCTCT
ACATCACTGTCTTGACTGTCATGGGTGTCTCTAAGTCTAACACCAAGTGC
TCCACTGTCGGTATCCAAGGAATTGCTTGGGCCTTTGGTGGCATGATCTT
TGCCCTTGTTTACTGCACTGCTGGTATCTCAGGAGGACACATCAACCCAG
CAGTGACCTTCGGTCTGCTGCTAGCGAGGAAGCTTTCCCTGACAAGAGCT
GTCTTCTACATGGTCATGCAGTGCCTTGGTGCCATCTGTGGTGCTGGTGT
TGTCAAGGGATTCGAAGGTTCAAAGAACTACGAGAGGTTGGGTGGTGGAG
CCAATGTTGTTGCTCACGGCTACACCAAGGGTGATGGTCTTGGTGCTGAG
ATTATTGGAACCTTTGTTCTTGTTTACACTGTCTTCTCTGCCACTGATGC
CAAGAGAAACGCCAGAGATTCTCATGTCCCTATTTTGGCCCCCCTCCCCA
TTGGATTTGCTGTTTTCTTGGTCCACCTGGCCACCATCCCCATCACAGGA
ACTGGCATCAACCCAGCTAGGAGTCTTGGAGCTGCCATCATCTTCAACAA
AGACCATGCCTGGGATGACCATTGGATCTTCTGGGTTGGACCATTCATTG
GAGCTGCACTGGCTGCTGTG
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