CV884767

Overview
NameCV884767
Unique NameCV884767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: GLPF_BACSU (Glycerol uptake facilitator protein OS=Bacillus subtilis GN=glpF PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.156e-11
Identity = 60/229 (26.20%), Postives = 92/229 (40.17%), Query Frame = 1
Query:  223 EFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV--KGFEGSKNYERLGGGANVVAHG----YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIF-------NKDHAWDDHWIFWVGPFIGAALAAV 870
            E + T L +        GV+   +     G   + + +G  +    Y   GISG H+NPA+T  L             Y+  Q +GAI GA ++        K+ +       V + G    +T  + L +E+IGTFVLV  + +         +     L PL +GF +  + ++    TG  INPAR LG  I              W   W+  VGP +G +   V
Sbjct:    7 EVIGTMLLIIFGAGVCAGVNLKKSLSFQSGWIVVVFGWGLGVAMAAYAVGGISGAHLNPALTIALAFVGDFPWKEVPVYIAAQMIGAIIGAVIIYLHYLPHWKSTDDPAAKLGVFSTGPSIPHTFANVL-SEVIGTFVLVLGILAI------GANQFTEGLNPLIVGFLIVAIGISLGGTTGYAINPARDLGPRIAHAFLPIPGKGSSNWKYAWVPVVGPILGGSFGGV 228          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP2_TALEU (Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.156e-11
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 1
Query:  193 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 504
            S +F RA  AEF+AT +F++  + + +     N + S   +  IA AFG  I  LV     ISG HINPAVT   L+   +S  RA FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVFAEFLATLIFVFFGLGSAL-----NWQQSLPSVLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP2_PROHA (Aquaporin-2 (Fragment) OS=Procavia capensis habessinica GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  193 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 504
            S +F RA ++EF+AT LF++  + + +     N   +   +  IA AFG  I  LV     ISG HINPAVT   L+   +S  RA+FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVLSEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQTLGHISGAHINPAVTIACLVGCHVSFLRALFYLAAQLLGAVAGAALL 99          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP2_HORSE (Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 1
Query:  193 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 504
            S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT   L+   +S  RA FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQAMPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: NIP12_ORYSJ (Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica GN=NIP1-2 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.260e-11
Identity = 60/222 (27.03%), Postives = 96/222 (43.24%), Query Frame = 1
Query:  217 IAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVK----GFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAA 867
            +AE + T+  ++     V+ V++S      V   GI   +G ++  LVY  + ISG H NPAVT       +    +   Y+V Q LG+   +  ++    G  G    E L  G        +       E + +F L++ V   ATD +       +  LA L +G  V +  L   P+TG  +NPARSLG A++  +   +   W++   P  G    A
Sbjct:   67 LAEILGTYFMIFAGCGAVV-VNQSTG--GAVTFPGICAVWGLVVMVLVYTVSHISGAHFNPAVTVAFATCGRFRWKQVPSYVVAQVLGSTMASLTLRVVFGGGGGGARGEHLFFGTTPAG---SMAQAAALEFVISFFLMFVVSGVATDNRA------IGELAGLAVGATVAVNVLFAGPVTGASMNPARSLGPAMVAGR---YGGVWVYVAAPVSGTVCGA 273          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP2_DUGDU (Aquaporin-2 (Fragment) OS=Dugong dugon GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.260e-11
Identity = 41/104 (39.42%), Postives = 57/104 (54.81%), Query Frame = 1
Query:  193 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 504
            S +F RA  +EF+AT LF++  + + +     N   +   +  IA AFG  I  LV     ISG HINPAVT   L+   +S  RA FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVFSEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRATFYLAAQLLGAVAGAAIL 99          
The following BLAST results are available for this feature:
BLAST of CV884767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 206
Match NameE-valueIdentityDescription
GLPF_BACSU4.156e-1126.20Glycerol uptake facilitator protein OS=Bacillus su... [more]
AQP2_TALEU4.156e-1140.38Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 P... [more]
AQP2_PROHA7.090e-1139.42Aquaporin-2 (Fragment) OS=Procavia capensis habess... [more]
AQP2_HORSE7.090e-1139.42Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 P... [more]
NIP12_ORYSJ9.260e-1127.03Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica G... [more]
AQP2_DUGDU9.260e-1139.42Aquaporin-2 (Fragment) OS=Dugong dugon GN=AQP2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010E01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T7_E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884767 ID=CV884767; Name=CV884767; organism=Citrus sinensis; type=EST; length=870bp
AAAAGCATCTTCTTTGAGAGAATAAGAGAGCGAGAGAGAGGTTCATCATC
GTCAATGGAAGGCAAAGAAGAGGATGTTAAGCTAGGAGCTAACAAGTTCT
CAGAGAGGCAACCCATTGGGACATCAGCTCAATCAGACAAAGACTACAAG
GAGCCACCACCAGCACCTTTGTTTGAGCCTGGTGAGCTCAAGTCATGGTC
TTTTTACAGAGCTGGTATTGCAGAGTTCATGGCTACCTTCTTGTTCCTCT
ACATCACTGTCTTGACTGTCATGGGTGTCTCTAAGTCTAACACCAAGTGC
TCCACTGTCGGTATCCAAGGAATTGCTTGGGCCTTTGGTGGCATGATCTT
TGCCCTTGTTTACTGCACTGCTGGTATCTCAGGAGGACACATCAACCCAG
CAGTGACCTTCGGTCTGCTGCTAGCGAGGAAGCTTTCCCTGACAAGAGCT
GTCTTCTACATGGTCATGCAGTGCCTTGGTGCCATCTGTGGTGCTGGTGT
TGTCAAGGGATTCGAAGGTTCAAAGAACTACGAGAGGTTGGGTGGTGGAG
CCAATGTTGTTGCTCACGGCTACACCAAGGGTGATGGTCTTGGTGCTGAG
ATTATTGGAACCTTTGTTCTTGTTTACACTGTCTTCTCTGCCACTGATGC
CAAGAGAAACGCCAGAGATTCTCATGTCCCTATTTTGGCCCCCCTCCCCA
TTGGATTTGCTGTTTTCTTGGTCCACCTGGCCACCATCCCCATCACAGGA
ACTGGCATCAACCCAGCTAGGAGTCTTGGAGCTGCCATCATCTTCAACAA
AGACCATGCCTGGGATGACCATTGGATCTTCTGGGTTGGACCATTCATTG
GAGCTGCACTGGCTGCTGTG
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