CV884767

Overview
NameCV884767
Unique NameCV884767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8852 contig Csv1_Contig8852:23..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.410e-37
Identity = 93/223 (41.70%), Postives = 130/223 (58.30%), Query Frame = 1
Query:  199 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALA 864
            +F++A  AEF+A  +F+ ++V + +    S      V +  I+  FG  I  +V C   ISGGHINPAVT  ++  RK+S+ ++VFY+  QCLGAI GAG++           +GG      HG  T G GL  E+I TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP IGA LA
Sbjct:   36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPP---NVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLA 247          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 7.522e-37
Identity = 93/223 (41.70%), Postives = 130/223 (58.30%), Query Frame = 1
Query:  199 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALA 864
            +F++A  AEF+AT +F+ + V + +    S      V +  I+  FG  I  +V C   ISGGHINPAVT  ++  RK+S+ ++VFY++ QCLGAI GAG++           +GG      HG  T G GL  E+I TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I      W +HWI+WVGP +GA LA
Sbjct:   33 AFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPP---SVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIYWVGPIMGAVLA 244          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 9.825e-37
Identity = 92/223 (41.26%), Postives = 132/223 (59.19%), Query Frame = 1
Query:  199 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALA 864
            +F++A  AEF+A  +F+ +++ + +    +  K   V +  I+  FG  I  +V C   ISGGHINPAVT  ++  RK+S+ ++VFY+  QCLGAI GAG++           +GG    + HG  T G GL  E+I TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP IGA LA
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPP---SVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLA 244          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.283e-36
Identity = 94/224 (41.96%), Postives = 131/224 (58.48%), Query Frame = 1
Query:  199 SFYRAGIAEFMATFLFLYITV-LTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALA 864
            +F++A  AEF+A  +F+ +++  T+    K N     V +  I+  FG  I  +V C   ISGGHINPAVT  ++  RK+S+ ++VFY+  QCLGAI GAG++           +GG      HG  T G GL  E+I TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP IGA LA
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPL--PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPP---SVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLA 244          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.086e-35
Identity = 91/230 (39.57%), Postives = 131/230 (56.96%), Query Frame = 1
Query:  184 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAV 870
            E+ S +F +A  AEF+AT +F++  + + +         +   I  IA AFG  I  L      +SGGHINPA+T  LL+  ++SL RAVFY+V Q +GAI GAG++ G         L    N + +  T G  +  E+I TF L   +FS+TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N+      HW+FWVGP +GAA+AA+
Sbjct:    4 EVCSLAFLKAVFAEFLATLIFVFFGLASAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNL--AVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAAVAAI 219          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 4.128e-35
Identity = 89/223 (39.91%), Postives = 130/223 (58.30%), Query Frame = 1
Query:  199 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALA 864
            +F++A  AEF+A  +F+ +++ + +    +  K   V +  I+  FG  I  +V C   ISGGHINPAVT  ++  R++S+ ++VFY+  QCLGAI GAG++           +GG      HG  + G GL  E+I TF LV+T+F++ D+KR    + V     L IG +V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP IGA LA
Sbjct:   33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPP---SVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLA 244          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.201e-34
Identity = 94/230 (40.87%), Postives = 131/230 (56.96%), Query Frame = 1
Query:  184 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKS-NTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAV 870
            EL+S SF+RA +AEF+ + L+      T++G+  S        G+ G A AFG     LV     +SGGHINPA+T   LLA +LSL RA+ Y++ Q LGA+ GAGV+ G   +     LG  A   + G   G G   E++ T   +  VF++ D + + R    P  A LP+GF++ L HL  IP TG G+NPARS   A+I      + +HW+FW GP +GAALAA+
Sbjct:    3 ELRSSSFWRAILAEFLGSLLY------TLLGLGASLRWAPGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVG--PGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVITRN---FTNHWVFWAGPLLGAALAAL 217          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.675e-34
Identity = 87/230 (37.83%), Postives = 130/230 (56.52%), Query Frame = 1
Query:  184 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAV 870
            E+ S +F++A  AEF+AT +F++  + + +         +   I  I+ AFG  I  L      +SGGHINPA+T  LL+  ++SL RA+FY+  Q +GAI GAG++           L    N +++  T G  +  E+I TF L   +FS+TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N+      HW+FWVGP +GA LAA+
Sbjct:    4 EVCSVAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNL--AVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAVLAAI 219          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.960e-34
Identity = 88/230 (38.26%), Postives = 131/230 (56.96%), Query Frame = 1
Query:  184 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAV 870
            E+ S +F +A  AEF+AT +F++  + + +         +   +  I+ AFG  I  +      +SGGH+NPA+T  LL+  ++SL RAVFY+V Q +GAI GA ++ G         L    N + +  T G  + AE+I TF L   VFS+TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS G A+I ++  +   HW+FWVGP +GAA AA+
Sbjct:    4 EVCSAAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSAMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARSNL--AVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSS--AHWVFWVGPIVGAATAAI 219          
BLAST of CV884767 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.960e-34
Identity = 88/230 (38.26%), Postives = 129/230 (56.09%), Query Frame = 1
Query:  184 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAV 870
            E+ S +F++A  AEF+AT +F++  + + +         +   I  I+ AFG  I  L      +SGGHINPA+T  LL+  ++SL RAVFY+  Q +GAI GAG++           L    N + +  T G  +  E+I TF L   +FS+TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N+      HW+FWVGP +GA LAA+
Sbjct:    4 EVCSLAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNL--AVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAMLAAI 219          
The following BLAST results are available for this feature:
BLAST of CV884767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 206
Match NameE-valueIdentityDescription
AQP4_NOTAL4.410e-3741.70Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_MOUSE7.522e-3741.70Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_HUMAN9.825e-3741.26Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_DIPME1.283e-3641.96Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP5_PIG1.086e-3539.57Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP4_BOVIN4.128e-3539.91Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
MIP_CHICK1.201e-3440.87Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP5_MOUSE2.675e-3437.83Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP5_SHEEP5.960e-3438.26Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP5_RAT5.960e-3438.26Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010E01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T7_E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884767 ID=CV884767; Name=CV884767; organism=Citrus sinensis; type=EST; length=870bp
AAAAGCATCTTCTTTGAGAGAATAAGAGAGCGAGAGAGAGGTTCATCATC
GTCAATGGAAGGCAAAGAAGAGGATGTTAAGCTAGGAGCTAACAAGTTCT
CAGAGAGGCAACCCATTGGGACATCAGCTCAATCAGACAAAGACTACAAG
GAGCCACCACCAGCACCTTTGTTTGAGCCTGGTGAGCTCAAGTCATGGTC
TTTTTACAGAGCTGGTATTGCAGAGTTCATGGCTACCTTCTTGTTCCTCT
ACATCACTGTCTTGACTGTCATGGGTGTCTCTAAGTCTAACACCAAGTGC
TCCACTGTCGGTATCCAAGGAATTGCTTGGGCCTTTGGTGGCATGATCTT
TGCCCTTGTTTACTGCACTGCTGGTATCTCAGGAGGACACATCAACCCAG
CAGTGACCTTCGGTCTGCTGCTAGCGAGGAAGCTTTCCCTGACAAGAGCT
GTCTTCTACATGGTCATGCAGTGCCTTGGTGCCATCTGTGGTGCTGGTGT
TGTCAAGGGATTCGAAGGTTCAAAGAACTACGAGAGGTTGGGTGGTGGAG
CCAATGTTGTTGCTCACGGCTACACCAAGGGTGATGGTCTTGGTGCTGAG
ATTATTGGAACCTTTGTTCTTGTTTACACTGTCTTCTCTGCCACTGATGC
CAAGAGAAACGCCAGAGATTCTCATGTCCCTATTTTGGCCCCCCTCCCCA
TTGGATTTGCTGTTTTCTTGGTCCACCTGGCCACCATCCCCATCACAGGA
ACTGGCATCAACCCAGCTAGGAGTCTTGGAGCTGCCATCATCTTCAACAA
AGACCATGCCTGGGATGACCATTGGATCTTCTGGGTTGGACCATTCATTG
GAGCTGCACTGGCTGCTGTG
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