CV884766
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884766 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.755e-11 Identity = 40/115 (34.78%), Postives = 59/115 (51.30%), Query Frame = -3 Query: 362 VAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIP 703 + H + L E++ TF LVYTV++ A D + D +APL IG LA P G +NPAR+ G A++ W HW++W+GP IGA +A ++ V+ P Sbjct: 142 LGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD-----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALV---GWNWRHHWVYWLGPLIGAGMAGALYEFVMAEQP 248
BLAST of CV884766 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.755e-11 Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = -3 Query: 374 GYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAA-VYHQIVI 694 G ++ +G+ EI+ TF LVYTV++ A D K+ + + +AP+ IGF V LA P +G +NPARS G A+ + +W++WVGP +G LA VY + I Sbjct: 135 GISEIEGVVMEIVITFALVYTVYATAADPKKGSLGT----IAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLVGGGLAGLVYGDVFI 236
BLAST of CV884766 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.755e-11 Identity = 41/117 (35.04%), Postives = 63/117 (53.85%), Query Frame = -3 Query: 380 GGANVVAHGYTKGDG-LGA---EIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQI 718 GG V A G + G G L A EI+ TF LVYTV++ +N + +AP+ IGF V LA +G +NPA + G A++ W +HW++W GP +G +A + +++ Sbjct: 126 GGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGS---LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLVGGGIAGLIYEV 236
BLAST of CV884766 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 39/107 (36.45%), Postives = 60/107 (56.07%), Query Frame = -3 Query: 377 GYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 694 G + + L EI+ TF LVYTV++ A D K+ + + +AP+ IGF V L G +NPA S G A++ +W+ W++WVGP IG LA V ++++ Sbjct: 137 GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGT----IAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWESQWVYWVGPLIGGGLAGVIYEVL 236
BLAST of CV884766 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.138e-11 Identity = 41/109 (37.61%), Postives = 63/109 (57.80%), Query Frame = -3 Query: 374 GYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAA-VYHQIVI 694 G ++ +G+ E++ TF LVYTV++ A D K+ + + +AP+ IGF V LA P +G +NPARS G A+ + +W++WVGP +G LA VY + I Sbjct: 135 GISELEGVVFEVVITFALVYTVYATAADPKKGSLGT----IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FAGNWVYWVGPLVGGGLAGLVYGDVFI 236
BLAST of CV884766 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.138e-11 Identity = 48/140 (34.29%), Postives = 69/140 (49.29%), Query Frame = -3 Query: 374 QCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 793 QC+GA+ GAG++K + YER A +A G G E++ T LV+ V A N D + +APL IG AV TG +NPARS G A+ + W H+I+W GP G +A ++ +I + Sbjct: 118 QCVGALVGAGMMKASLPTF-YER-DLSATTLATGVNVARGFFLEMVTTSFLVFVVLGV--AVYNEWDPKISRVAPLAIGCAVIAGVGFLNLFTGGSLNPARSFGPAVFSD---TWHRHYIYWFGPICGGIIAGLFWRIFL 250 The following BLAST results are available for this feature:
BLAST of CV884766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884766 ID=CV884766; Name=CV884766; organism=Citrus sinensis; type=EST; length=798bpback to top |