CV884755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.634e-44 Identity = 85/183 (46.45%), Postives = 120/183 (65.57%), Query Frame = -2 Query: 264 KQEKMIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFF 812 KQ+ F +K KQ + + K+ + ELR +DI E+ +P C+++F + +D++NF +SI P +G Y TF FT + YP++ PKV C T VYHPNIDLEG+VCLNILR+DW PVLNI T+I+GL LF +PN +DPLN +AA ++ DN K FE+NVR+++ GGY+ F Sbjct: 52 KQKSKDSYFSLKTKQSSESGS-------KRANPAELRAQKDIDEMEVPTGCAVSFKD-TNDILNFNLSITPTDGLYQSATFQFTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDNKKTFEANVRQSLRGGYISNRQF 226
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.118e-37 Identity = 82/179 (45.81%), Postives = 114/179 (63.69%), Query Frame = -2 Query: 279 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCS---ITFPNGKDDLMN--FEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYV 800 M+KL ++++K+++ EN++ P SA +RL RD+ L+LP T + IT P+ D + EV +RPDEGYY G+ F + +YP E PKV C K++HPNIDL+GNVCLNILREDW P L++ +II GL LF +PN DPLN +AA +L + K F VR M+GG + Sbjct: 1 MLKLRQLQKKKQKENENSSSIQP--NLSAARIRLKRDLDSLDLPPTVTLNVITSPDSADRSQSPKLEVIVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGGSI 177
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.503e-36 Identity = 84/185 (45.41%), Postives = 112/185 (60.54%), Query Frame = -2 Query: 264 MIKLFKVKE-KQRENAENANG--KTPVKKQSAGELRLHRDISELNLPKTCS---ITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFF 800 M+KL ++++ KQ++ A+NA K S +LRL +DI EL LP T I+ N K+ M+ + I PDEG+Y GG F FT YP + PKV C K++HPNID G +CLNILREDW P L++ I+ GL LF +PN DPLN EAA VL + F + VR AM+G VG T++ Sbjct: 1 MLKLRQLQQQKQQQLAKNAGSSVKANTNSTSPAKLRLQKDIEELELPPTVRVNIISLDNHKE--MSLNIIIIPDEGFYKGGKFRFTATFLETYPIDPPKVICNNKIFHPNIDPHGKICLNILREDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAEVLNKDKLEFGNLVRLAMSGAMVGSTYY 183
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC12_ASHGO (NEDD8-conjugating enzyme UBC12 OS=Ashbya gossypii GN=UBC12 PE=3 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 5.504e-34 Identity = 79/184 (42.93%), Postives = 116/184 (63.04%), Query Frame = -2 Query: 267 MIKLFKV-KEKQRENAENANGKTPVKKQSAG---ELRLHRDISELNLPKTCSI-TFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYV-GQTF 800 M+KL ++ KEKQR+ A+ + P + +SA +LR+ +D++ L LP T ++ T G ++ + +S P+EG Y GG F F+ YP E P VKC +YHPNID GN+CLN+LREDW PV+++ T++ GL LF +PN DPLN +AA + +P FE+NV+ M GG++ GQ F Sbjct: 1 MLKLRQLQKEKQRQAAQ---AQAPAQGRSAASPAQLRVEKDLATLELPTTVTLDTKCLGSENKVYLRIS--PEEGVYRGGHFRFSVVFRDTYPIEPPTVKCLNTIYHPNIDYSGNICLNVLREDWSPVMDLQTVVLGLLFLFLEPNGSDPLNRQAADTMLRDPYRFETNVQATMMGGHLDGQVF 179
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC12_KLULA (NEDD8-conjugating enzyme UBC12 OS=Kluyveromyces lactis GN=UBC12 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.771e-32 Identity = 68/183 (37.16%), Postives = 106/183 (57.92%), Query Frame = -2 Query: 252 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRDISELNLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 800 M+KL + E + + E +T + +RL +D+ ++L + ++ M ++I+PD GYY GGT+ F + YP E P VKC ++YHPNID++GNVCLN+LREDW P L+I +II G+ LF +PN DPLN +AA L ++P FE+ V ++ G + ++ + I Sbjct: 1 MLKLRALAEAKAKAKEGQGQETTPQVIKPSLIRLKKDLENIDLSEQICEYTTYLDENPMRVNLAIKPDIGYYAGGTYYFNVFIKDTYPMEPPVVKCMHRIYHPNIDIDGNVCLNLLREDWTPALDIQSIIIGILFLFHEPNGRDPLNKDAAKTLIEDPLRFENKVNHSLRGNNIDGVWYDKII 183
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBE2F_DANRE (NEDD8-conjugating enzyme UBE2F OS=Danio rerio GN=ube2f PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.318e-24 Identity = 63/156 (40.38%), Postives = 93/156 (59.62%), Query Frame = -2 Query: 348 QRENAENANGKTPVKKQSAG------ELRLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE------DWKPVLNINTIIYGLFHLFTQ-PNYEDPLNHEAA 770 +RE A G+TP A + L ++++EL NLP TC +TFP+ ++ L +F+++I PDEGYY+GG F F +V Y PKVKC T+++HPNI G +CL++LRE W P + +++GL LFT N++DPLN +AA Sbjct: 9 KREEGVRA-GRTPAGSNDAAHRVSIRDRLLIKEVAELEANLPSTCKVTFPD-ENKLCHFQLAISPDEGYYLGGKFQFEIEVPEAYNMVPPKVKCLTRIWHPNIAETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIDAA 162
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBE2F_RAT (NEDD8-conjugating enzyme UBE2F OS=Rattus norvegicus GN=Ube2f PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.661e-22 Identity = 58/144 (40.28%), Postives = 86/144 (59.72%), Query Frame = -2 Query: 348 NANGKTPVKKQSAGELRLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE------DWKPVLNINTIIYGLFHLFTQ-PNYEDPLNHEAA 752 +A+ ++ S + L ++++EL NLP TC + FP+ + L F++++ PDEGYY GG F F +V Y PKVKC TK++HPNI G +CL++LRE W P + +++GL LFT N++DPLN EAA Sbjct: 20 SASTSDSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPD-PNKLHCFQLTVSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAA 162
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBE2F_HUMAN (NEDD8-conjugating enzyme UBE2F OS=Homo sapiens GN=UBE2F PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.661e-22 Identity = 58/143 (40.56%), Postives = 84/143 (58.74%), Query Frame = -2 Query: 348 ANGKTPVKKQSAGELRLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE------DWKPVLNINTIIYGLFHLFTQ-PNYEDPLNHEAA 749 A ++ S + L ++++EL NLP TC + FP+ + L F++++ PDEGYY GG F F +V Y PKVKC TK++HPNI G +CL++LRE W P + +++GL LFT N++DPLN EAA Sbjct: 21 ATASDSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPD-PNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAA 162
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UB2FA_MOUSE (NEDD8-conjugating enzyme UBE2F OS=Mus musculus GN=Ube2f PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.661e-22 Identity = 58/144 (40.28%), Postives = 86/144 (59.72%), Query Frame = -2 Query: 348 NANGKTPVKKQSAGELRLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE------DWKPVLNINTIIYGLFHLFTQ-PNYEDPLNHEAA 752 +A+ ++ S + L ++++EL NLP TC + FP+ + L F++++ PDEGYY GG F F +V Y PKVKC TK++HPNI G +CL++LRE W P + +++GL LFT N++DPLN EAA Sbjct: 20 SASTSDSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPD-PNKLHCFQLTVSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAA 162
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBE2F_CHICK (NEDD8-conjugating enzyme UBE2F OS=Gallus gallus GN=UBE2F PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22 Identity = 56/136 (41.18%), Postives = 83/136 (61.03%), Query Frame = -2 Query: 348 KKQSAGELRLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE------DWKPVLNINTIIYGLFHLFTQ-PNYEDPLNHEAA 728 ++ S + L ++++EL NLP TC + FP+ + L F++++ PDEGYY GG F F +V Y PKVKC T+++HPNI G +CL++LRE W P + +++GL LFT N++DPLN EAA Sbjct: 28 RRVSVRDKLLVKEVAELEANLPCTCKVNFPD-PNKLHYFQLTVIPDEGYYQGGKFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAA 162 The following BLAST results are available for this feature:
BLAST of CV884755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884755 ID=CV884755; Name=CV884755; organism=Citrus sinensis; type=EST; length=828bpback to top |