CV884755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBE2F_BOVIN (NEDD8-conjugating enzyme UBE2F OS=Bos taurus GN=UBE2F PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.833e-22 Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = -2 Query: 348 NANGKTPVKKQSAGELRLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE------DWKPVLNINTIIYGLFHLFTQ-PNYEDPLNHEAA 752 +A ++ S + L ++++EL NLP TC + FP+ + L F++++ PDEGYY GG F F +V Y PKVKC T+++HPNI G +CL++LRE W P + +++GL LFT N++DPLN EAA Sbjct: 20 SATASDSTRRVSVRDRLLVKEVAELEANLPCTCKVHFPD-PNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAA 162
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UB2FB_MOUSE (NEDD8-conjugating enzyme UBE2F-B OS=Mus musculus GN=Ube2fb PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.244e-22 Identity = 54/119 (45.38%), Postives = 72/119 (60.50%), Query Frame = -2 Query: 348 ELNLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE------DWKPVLNINTIIYGLFHLFTQ-PNYEDPLNHEAA 683 E NLP TC + FP+ + L F++++ PDEGYY GG F F +V Y PKVKC TK++HPNI G +CL++LRE W P + +++GL LFT N+ DPLN EAA Sbjct: 45 EANLPWTCKVHFPD-PNKLHCFQLTVSPDEGYYQGGNFQFEIEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSADGTGWAPTRTLKDVVWGLNSLFTDLLNFYDPLNIEAA 162
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBE2F_XENTR (NEDD8-conjugating enzyme UBE2F OS=Xenopus tropicalis GN=ube2f PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.406e-21 Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = -2 Query: 348 KKQSAGELRLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE------DWKPVLNINTIIYGLFHLFTQ-PNYEDPLNHEAA 728 ++ S + L ++++EL NLP TC + FP+ + L F +++ PDE YY GG F F +V Y PKVKC T+++HPNI G +CL++LRE W P + +++GL LFT N++DPLN EAA Sbjct: 28 RRVSVRDRLLVKEVAELEANLPCTCKVNFPD-PNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAA 162
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBE2F_XENLA (NEDD8-conjugating enzyme UBE2F OS=Xenopus laevis GN=ube2f PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.406e-21 Identity = 55/137 (40.15%), Postives = 82/137 (59.85%), Query Frame = -2 Query: 348 VKKQSAGELRLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE------DWKPVLNINTIIYGLFHLFTQ-PNYEDPLNHEAA 731 +++ S + L ++++EL NLP TC + FP+ + L F +++ PDE YY GG F F +V Y PKVKC T+++HPNI G +CL++LRE W P + +++GL LFT N++DPLN EAA Sbjct: 27 MRRISVRDRLLVKEVAELEANLPCTCKVNFPD-PNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAA 162
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.908e-20 Identity = 47/135 (34.81%), Postives = 77/135 (57.04%), Query Frame = -2 Query: 303 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 704 R+ +++ +L S + +D+ +++ +I P E Y GG F+ T P YP + PKV +TKV+HPNI+ G++CL+IL+E W P L I+ ++ + L T PN +DPL E A + + + +ES R Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTAR 139
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 7.716e-20 Identity = 47/135 (34.81%), Postives = 77/135 (57.04%), Query Frame = -2 Query: 303 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 704 R+ +++ +L + + +D+ +++ +I P E Y GG F+ + P YP + PKV KTKVYHPNI+ G++CL+IL+E W P L I+ ++ + L T PN +DPL E A + + + +ES R Sbjct: 5 RILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTAR 139
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.316e-19 Identity = 49/137 (35.77%), Postives = 81/137 (59.12%), Query Frame = -2 Query: 303 RLHRDISELNL--PKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 704 R+++++ +L P +CS P G DD+ ++ +I P + + GG F+ T P YP + PKV +TKVYHPNI+ G++CL+IL+E W P L ++ ++ + L T PN +DPL E A + + + +ES + Sbjct: 5 RINKELRDLQRDPPVSCSAG-PTG-DDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQ 139
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.719e-19 Identity = 50/137 (36.50%), Postives = 81/137 (59.12%), Query Frame = -2 Query: 303 RLHRDISELNL--PKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 704 R+ +++ EL P +CS P G +D+ +++ +I P+E Y GG F+ P YP + PKV +TKV+HPNI+ GN+CL+IL++ W P L I+ ++ + L T PN +DPL E A + + + +E+ R Sbjct: 5 RILKELKELQRDPPVSCSAG-PTG-EDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMAR 139
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.245e-19 Identity = 46/135 (34.07%), Postives = 77/135 (57.04%), Query Frame = -2 Query: 303 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 704 R+ +++ +L S + +D+ +++ +I P + Y GG F+ T P YP + PKV +TKV+HPNI+ G++CL+IL+E W P L I+ ++ + L T PN +DPL E A + + + +ES R Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTAR 139
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.829e-19 Identity = 49/137 (35.77%), Postives = 80/137 (58.39%), Query Frame = -2 Query: 303 RLHRDISELNL--PKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 704 R+++++S+L P +CS P G DDL +++ SI P + Y GG F + YP + PK+ TK+YHPNI+ GN+CL+IL++ W P L I+ ++ + L T N +DPL E A + + + K +E+ + Sbjct: 5 RINKELSDLGRDPPSSCSAG-PVG-DDLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLKPPKIALTTKIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYEATAK 139 The following BLAST results are available for this feature:
BLAST of CV884755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884755 ID=CV884755; Name=CV884755; organism=Citrus sinensis; type=EST; length=828bpback to top |