CV884755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.001e-19 Identity = 50/137 (36.50%), Postives = 80/137 (58.39%), Query Frame = -2 Query: 303 RLHRDISELNL--PKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 704 R++R++++L P +CS P G DDL +++ +I P + Y GG F + YP + PKV T++YHPNI+ G++CL+ILR+ W P L I+ ++ + L T PN +DPL E A V + + +E + R Sbjct: 5 RINRELADLGKDPPSSCSAG-PVG-DDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAR 139
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.001e-19 Identity = 45/135 (33.33%), Postives = 77/135 (57.04%), Query Frame = -2 Query: 303 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 704 R+ +++ +L S + +D+ +++ +I P + Y GG F+ T P YP + PKV +TKV+HPN++ G++CL+IL+E W P L I+ ++ + L T PN +DPL E A + + + +ES R Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTAR 139
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.532e-19 Identity = 46/135 (34.07%), Postives = 77/135 (57.04%), Query Frame = -2 Query: 303 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 704 R+ +++ +L S + +D+ +++ +I P E Y GG F+ T P YP + PKV +TKV+HPNI+ G++CL+IL+E W P L I+ ++ + L T PN +DPL E A + + + +E+ R Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATAR 139
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.531e-19 Identity = 48/138 (34.78%), Postives = 78/138 (56.52%), Query Frame = -2 Query: 300 RLHRDISELNL--PKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRR 704 R+ R++ ++ P CS P ++D+ +++ +I P + Y GG F + S YP + PKV KTKVYHPNID +G++CL+IL+E W P + ++ + L T PN DPL E A + + + +ES ++ Sbjct: 5 RISRELRDMQRHPPANCSAG-PVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQK 141
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.900e-18 Identity = 44/135 (32.59%), Postives = 77/135 (57.04%), Query Frame = -2 Query: 303 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 704 R+ +++ +L S + +D+ +++ +I P + Y GG F+ + P YP + PKV +TKV+HPNI+ G++CL+IL+E W P L I+ ++ + L T PN +DPL E A + + + +E+ R Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTAR 139
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.482e-18 Identity = 44/135 (32.59%), Postives = 74/135 (54.81%), Query Frame = -2 Query: 303 RLHRDISELNLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 704 R+ +++S+L S + DDL +++ SI P + Y GG F + YP + PKV TK+YHPNI+ GN+CL+IL++ W P L ++ ++ + L T N +DPL E A + + + +E+ + Sbjct: 6 RIAKELSDLGRDPPASCSAGPVGDDLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINSSGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAQIYKTDKAKYEATAK 140
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.242e-18 Identity = 48/137 (35.04%), Postives = 78/137 (56.93%), Query Frame = -2 Query: 303 RLHRDISELNL--PKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 704 R+ +++S+L P +CS P G DDL +++ SI P + Y GG F + YP + PK+ TK+YHPNI+ GN+CL+IL++ W P L ++ ++ + L T N +DPL E A + + + +E+ R Sbjct: 6 RIAKELSDLERDPPTSCSAG-PVG-DDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATAR 140
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 3.242e-18 Identity = 48/137 (35.04%), Postives = 78/137 (56.93%), Query Frame = -2 Query: 303 RLHRDISELNL--PKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 704 R+++++++L P +CS P G +DL +++ +I P + Y GG F YP + PKV T++YHPNI+ G++CL+ILR+ W P L I+ ++ + + T PN +DPL E A V + +ES R Sbjct: 5 RINKELTDLGRDPPSSCSAG-PVG-EDLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTARAQYESTAR 139
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.232e-17 Identity = 47/137 (34.31%), Postives = 78/137 (56.93%), Query Frame = -2 Query: 303 RLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 704 R+H+++++L + P CS P G DD+ +++ +I P++ Y GG F T YP + PKV T++YHPNI+ G++CL+ILR W P L I+ ++ + L PN +DPL E A + + + + + R Sbjct: 5 RIHKELNDLARDPPAQCSAG-PVG-DDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAR 139
BLAST of CV884755 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.232e-17 Identity = 47/137 (34.31%), Postives = 78/137 (56.93%), Query Frame = -2 Query: 303 RLHRDISEL--NLPKTCSITFPNGKDDLMNFEVSIR-PDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 704 R+H+++++L + P CS P G DD+ +++ +I P++ Y GG F T YP + PKV T++YHPNI+ G++CL+ILR W P L I+ ++ + L PN +DPL E A + + + + + R Sbjct: 5 RIHKELNDLARDPPAQCSAG-PVG-DDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAR 139 The following BLAST results are available for this feature:
BLAST of CV884755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884755 ID=CV884755; Name=CV884755; organism=Citrus sinensis; type=EST; length=828bpback to top |