CV884750

Overview
NameCV884750
Unique NameCV884750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884750 vs. ExPASy Swiss-Prot
Match: PPT2_DROME (Lysosomal thioesterase PPT2 homolog OS=Drosophila melanogaster GN=Ppt2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16
Identity = 77/274 (28.10%), Postives = 130/274 (47.45%), Query Frame = 1
Query:   58 ITVLLLFFFPVSRSI---PFIVLHGI--GDQCSNQGVKQFTE--------NLSSFSGSKGYCIEVGDGTWDSWFKPLEEQTEIVCEKVKKMKELS-EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLIKA---EVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGKV 828
            + V LL    +S S+   P ++LHGI  G +     V++  E        N   F+G   Y +E      ++W      Q + V + + ++ +L  EG  ++G SQG L+ R  ++       VK F+SL  P AG       G+    +I  +L      E++   V  H +  GY   P     YL+  +FLP +NNE     ++++K     L  LV+I   +D V+ P +++ FGY+ +     V+P  +  ++T D IG++TL +AGK+
Sbjct:    7 VLVALLTCSSISVSLAYKPVVILHGILSGAESMASLVREIEEFHPGTIVYNCDKFNG--WYSLE------NAW-----RQVDQVRDYLNEVGKLHPEGIIVLGYSQGGLLARAAIQSLPEHN-VKTFISLSSPQAGQY-----GTSFLHLIFPDLAAKTAFELFYSRVGQHTSVGGYWNDPQRQDLYLKYSEFLPLINNEKKTSNSTSFKMGMVRLNKLVMIGGPNDDVITPWQSSHFGYFDEN--MDVIPFIRRPIFTSDSIGIRTLQEAGKL 259          
BLAST of CV884750 vs. ExPASy Swiss-Prot
Match: PPT2_BOVIN (Lysosomal thioesterase PPT2 OS=Bos taurus GN=PPT2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.938e-12
Identity = 74/274 (27.01%), Postives = 123/274 (44.89%), Query Frame = 1
Query:   43 VPISFITVLLLFFFPVSRSI---PFIVLHGIGDQCSNQGVKQFTENLS-SFSGSKGYCIEVGDGTWDSWFKPLEEQTEIVCEKVKK-MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGKVHFISVAG 849
            +P   + +LLL   P        P IV+HG+ D  S+   +   E ++ +  G+    +++ DG      +PL EQ +   E V   M +  +G +++  SQG L+ R ++   +    V +F+SL  P  G          +F     + +    YS + Q+  +   Y   P+    YL    FL  +N E      + +++ F  L  LVLI   DD V+ P ++++FG+Y   A   VL  +K  +Y  D  GLKTL   G +    +AG
Sbjct:   18 LPFLLLLLLLLPAAPAPHRAAYKPVIVVHGLFD--SSYSFRHLLEYINETHPGTAVTVLDLFDGRES--LRPLWEQVQGFREAVAPIMAKALQGVHLICYSQGGLVCRALLSVMDEHN-VDSFISLSSPQMGQYGDTNYLKWLFPTSMRSNLYRICYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAWRKNFLRLGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEKQLVYLRDSFGLKTLLARGAIVRCPMAG 283          
BLAST of CV884750 vs. ExPASy Swiss-Prot
Match: PPT2A_XENLA (Lysosomal thioesterase PPT2-A OS=Xenopus laevis GN=ppt2-A PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.938e-12
Identity = 70/272 (25.74%), Postives = 126/272 (46.32%), Query Frame = 1
Query:   52 SFITVLLLFFFPVSRSI---PFIVLHGIGDQCSN-QGVKQFTENLSSFSGSKGYCIEVGDGTWDSWFKPLEEQTEIVCEKVKKMKELS--EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGKVHFISVAG 849
            +F  +L L  + V RS+   P IV+HG+ D  +N + + Q+     S  G+    +++ D       +PL +Q +   E +  + + +  +G +++  SQG LI RG+++       V  F+SL  P  G          +F     + +    Y+   Q   +   +   P+    Y+    FL  LN+E P+   + +K+ F  L+ +VLI   DD V+ P E++ FG+Y +     VL  +   +Y +D  GL+++D  G +    V G
Sbjct:   11 TFCLLLPLLVWMVDRSLCYKPVIVVHGLFDSSANFKNLLQYINE--SHPGTNVTVLDLFDNKES--LQPLWKQVQGFKEAIYPIMQNAGRDGVHLLCYSQGGLICRGLLQTMPDHN-VDTFISLSSPQMGQYGDTDYLRYLFPTYVKSNLYRLCYTQMGQT-FSICNFWNDPHHHGIYVNVSDFLAPLNSERPEPNATDWKKNFLRLRKMVLIGGPDDGVITPWESSHFGFYDEN--ETVLEMKYQMVYQDDTFGLRSMDYRGAITVYGVPG 274          
BLAST of CV884750 vs. ExPASy Swiss-Prot
Match: PPT2_MOUSE (Lysosomal thioesterase PPT2 OS=Mus musculus GN=Ppt2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.100e-11
Identity = 67/251 (26.69%), Postives = 117/251 (46.61%), Query Frame = 1
Query:  103 PFIVLHGIGDQCSNQGVKQFTENLS-SFSGSKGYCIEVGDGTWDSWFKPLEEQTEIVCEKVKK-MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGKVHFISVAG 849
            P IV+HG+ D  S+   +   + ++ + +G+    +++ DG      +PL EQ +   E V   M++  EG +++  SQG L+ R ++   +    V +F+SL  P  G          +F     + +    YS + Q+  +   Y   P+    YL    FL  +N E      + +++ F  +  LVLI   DD V+ P ++++FG+Y   A   VL  ++  +Y  D  GLKTL   G +    +AG
Sbjct:   38 PVIVVHGLFD--SSYSFRHLLDYINETHTGTVVTVLDLFDGRES--LRPLWEQVQGFREAVVPIMEKAPEGVHLICYSQGGLVCRALLSVMDNHN-VDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRVCYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAWRKNFLRVGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEEQPVYLRDSFGLKTLLARGAIVRCPMAG 280          
BLAST of CV884750 vs. ExPASy Swiss-Prot
Match: PPT2_RAT (Lysosomal thioesterase PPT2 OS=Rattus norvegicus GN=Ppt2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11
Identity = 67/251 (26.69%), Postives = 116/251 (46.22%), Query Frame = 1
Query:  103 PFIVLHGIGDQCSNQGVKQFTENLS-SFSGSKGYCIEVGDGTWDSWFKPLEEQTEIVCEKVKK-MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGKVHFISVAG 849
            P IV+HG+ D  S+   +   + ++ +  G+    +++ DG      +PL EQ +   E V   M++  EG +++  SQG L+ R ++   +    V +F+SL  P  G          +F     + +    YS + Q+  +   Y   P+    YL    FL  +N E      + +++ F  +  LVLI   DD V+ P ++++FG+Y   A   VL  ++  +Y  D  GLKTL   G +    +AG
Sbjct:   38 PVIVVHGLFD--SSYSFRHLLDYINETHPGTVVTVLDLFDGRES--LRPLWEQVQGFREAVVPIMEKAPEGVHLICYSQGGLVCRALLSVMDEHN-VDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAWRKNFLRVGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEEQPVYLRDSFGLKTLLARGAIVRCPMAG 280          
BLAST of CV884750 vs. ExPASy Swiss-Prot
Match: PPT2_HUMAN (Lysosomal thioesterase PPT2 OS=Homo sapiens GN=PPT2 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.460e-11
Identity = 67/251 (26.69%), Postives = 116/251 (46.22%), Query Frame = 1
Query:  103 PFIVLHGIGDQCSNQGVKQFTENLS-SFSGSKGYCIEVGDGTWDSWFKPLEEQTEIVCEKVKK-MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGKVHFISVAG 849
            P IV+HG+ D  S+   +   E ++ +  G+    +++ DG      +PL EQ +   E V   M +  +G +++  SQG L+ R ++   +    V +F+SL  P  G          +F     + +    YS + Q+  +   Y   P+    YL    FL  +N E      + +++ F  + +LVLI   DD V+ P ++++FG+Y   A   VL  ++  +Y  D  GLKTL   G +    +AG
Sbjct:   38 PVIVVHGLFD--SSYSFRHLLEYINETHPGTVVTVLDLFDGRES--LRPLWEQVQGFREAVVPIMAKAPQGVHLICYSQGGLVCRALLSVMDDHN-VDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVGHLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAG 280          
The following BLAST results are available for this feature:
BLAST of CV884750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PPT2_DROME5.637e-1628.10Lysosomal thioesterase PPT2 homolog OS=Drosophila ... [more]
PPT2_BOVIN4.938e-1227.01Lysosomal thioesterase PPT2 OS=Bos taurus GN=PPT2 ... [more]
PPT2A_XENLA4.938e-1225.74Lysosomal thioesterase PPT2-A OS=Xenopus laevis GN... [more]
PPT2_MOUSE1.100e-1126.69Lysosomal thioesterase PPT2 OS=Mus musculus GN=Ppt... [more]
PPT2_RAT4.180e-1126.69Lysosomal thioesterase PPT2 OS=Rattus norvegicus G... [more]
PPT2_HUMAN5.460e-1126.69Lysosomal thioesterase PPT2 OS=Homo sapiens GN=PPT... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010D01_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884750 ID=CV884750; Name=CV884750; organism=Citrus sinensis; type=EST; length=873bp
GAACCTTTTGATCGCATCAGCATTTTCATGGCTTTTCGCTCAGTACCCAT
TTCTTTCATTACCGTCTTGCTCTTGTTTTTCTTTCCAGTTTCTCGTTCGA
TTCCCTTCATAGTACTCCATGGTATTGGAGACCAGTGTTCCAATCAAGGA
GTGAAACAGTTCACCGAAAATCTTAGCAGTTTTTCAGGTTCTAAAGGATA
TTGCATAGAAGTTGGGGATGGGACATGGGATTCCTGGTTTAAGCCTCTGG
AGGAACAGACAGAAATTGTTTGTGAAAAGGTGAAGAAAATGAAAGAACTG
AGTGAAGGTTACAACATAGTTGGTCTCTCCCAGGGTAACTTAATAGGTCG
AGGTGTTGTAGAGTTCTGCGAAGGTGGACCTCCGGTTAAGAACTTTGTTT
CCTTGGGAGGGCCTCATGCTGGTACTGCTTCTGTGCCCCTTTGTGGTTCT
GGTATCTTTTGCATAATTGCAAACAACCTAATCAAGGCAGAGGTCTACAG
TGACTATGTCCAAGATCATTTGGCTCCCAGTGGATATCTTAAATTTCCAA
ATGACATCCCCAAGTATTTGGAAAAATGTAAGTTCCTTCCAAAGCTTAAC
AACGAACTCCCTGATAAGAGGAACTCCACTTACAAGGAACGCTTCAGCTG
CTTGCAAAACTTAGTGCTTATAATGTTCAAGGATGACAAGGTTTTGATAC
CCAAGGAAACAGCCTGGTTCGGATATTATCCAGATGGGGCCTTCAGTCCA
GTTCTGCCTCCACAAAAGACAAAGCTTTATACTGAAGACTGGATCGGCCT
TAAAACCTTAGATGATGCTGGAAAGGTTCACTTCATCAGTGTGGCAGGAG
GTCATCTGAAAATCTCCAAAGCT
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