CV884748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884748 vs. ExPASy Swiss-Prot
Match: KDM1B_HUMAN (Lysine-specific histone demethylase 1B OS=Homo sapiens GN=KDM1B PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 6.208e-37 Identity = 80/206 (38.83%), Postives = 127/206 (61.65%), Query Frame = 1 Query: 25 FEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDL---DTFGHLTDDSSSRGEFFLFYSYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMA 633 + VL TVPL +L+ G+I+F P L ++K+ AI LG G++ K+A+ FPY FW++ + D FGH+ +S RG F +FY +L++++AGEA ++ + + + L+ +++ + VP+P + TRW DP+ +YS V G SG+ YDI+AE + G +FFAGEAT R +P T+ GA+LSG+RE +K+A Sbjct: 619 YSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQ--EVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDI-QGTVFFAGEATNRHFPQTVTGAYLSGVREASKIA 821
BLAST of CV884748 vs. ExPASy Swiss-Prot
Match: KDM1B_MOUSE (Lysine-specific histone demethylase 1B OS=Mus musculus GN=Kdm1B PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.608e-35 Identity = 79/201 (39.30%), Postives = 126/201 (62.69%), Query Frame = 1 Query: 40 VLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDL---DTFGHLTDDSSSRGEFFLFYSYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMA 633 VL TVPL +L+ G+I+F P L ++K+ AI LG G++ K+A+ FPY FW++ + D FGH+ +S RG F +FY + +L++++ GEA +M + + + IL+ +++ + +PEP + TRW +P+ +YS V SG+ YDI+AE + G +FFAGEAT R +P T+ GA+LSG+RE +K+A Sbjct: 629 VLVTVPLAILQRGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASQRGLFAVFYDMDSQQS--VLMSVITGEAVASLRTMDDKQVLQQCMGILRELFKEQ--EIPEPTKYFVTRWSTEPWIQMAYSFVKTFGSGEAYDIIAEEI-QGTVFFAGEATNRHFPQTVTGAYLSGVREASKIA 824
BLAST of CV884748 vs. ExPASy Swiss-Prot
Match: PAO4_ARATH (Probable polyamine oxidase 4 OS=Arabidopsis thaliana GN=PAO4 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.435e-25 Identity = 76/200 (38.00%), Postives = 107/200 (53.50%), Query Frame = 1 Query: 13 GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGL 612 G F D V+ TVP+GVLK+ I+F PELPQ K AI LG G NK+A+ F FW +++ G + S + G +FL AT G P+L+ + AG A E + V+ LK ++ + P+P Q + TRWG DP +LG Y+ VG D Y + E V + +FF GEA + + HGAFL+G+ Sbjct: 264 GGTNFVADAVIITVPIGVLKANLIQFEPELPQWKTSAISGLGVGNENKIALRFDRAFW-PNVEFLGMVAPTSYACG-YFLNLHKAT--GHPVLVYMAAGNLAQDLEKLSDEATANFVMLQLKKMFP----DAPDPAQYLVTRWGTDPNTLGCYAYDVVGMPEDLYPRLGEPVDN--IFFGGEAVNVEHQGSAHGAFLAGV 453
BLAST of CV884748 vs. ExPASy Swiss-Prot
Match: PAO2_ARATH (Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.874e-25 Identity = 77/198 (38.89%), Postives = 108/198 (54.55%), Query Frame = 1 Query: 19 QVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGL 612 Q F D + VPLGVLKSG+IKF P+LP+ K +AI LG G+ NK+ + F VFW F + ++S +FL AT G P+L+ + AG+ A E M A + L+ I + P+Q + +RWG D S+GSYS VG D Y+ + V + LFFAGEAT +P ++HGA+ +GL Sbjct: 264 QTFVADAAVIAVPLGVLKSGTIKFEPKLPEWKQEAINDLGVGIENKIILHFEKVFWPK--VEFLGVVAETSYGCSYFLNLHKAT--GHPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILP----DALPPVQYLVSRWGSDVNSMGSYSYDIVGKPHDLYERLRVPVDN--LFFAGEATSSSFPGSVHGAYSTGL 451
BLAST of CV884748 vs. ExPASy Swiss-Prot
Match: PAOX_MOUSE (Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Mus musculus GN=Paox PE=1 SV=3) HSP 1 Score: 106.686 bits (265), Expect = 1.485e-22 Identity = 70/216 (32.41%), Postives = 112/216 (51.85%), Query Frame = 1 Query: 40 VLCTVPLGVLKSGSIKFI-PELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFL------------FYSYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESV---GDG---RLFFAGEATIRRYPATMHGAFLSGLRETAKM 630 V+ TVPLG LK F P LP +K +AIK+LG+G NK+ + F FWE D + +D+S + L F + +L +AG + E++ + + + Q+L+ + + + ++ ++W P++ GSYS VAVG++GDD D+MA+ + G G ++ FAGEAT R + +T HGA LSG RE ++ Sbjct: 276 VIVTVPLGFLKEHQDTFFEPPLPAKKAEAIKKLGFGTNNKIFLEFEEPFWEPDCQFIQVVWEDTSPLQDTALSLQDTWFKKLIGFLVQPSFESSHVLCGFIAGLESEFMETLSDEEVLLSLTQVLRRVTGNPQLPAAKSVRR--SQWHSAPYTRGSYSYVAVGSTGDDLDLMAQPLPEDGTGTQLQVLFAGEATHRTFYSTTHGALLSGWREADRL 489
BLAST of CV884748 vs. ExPASy Swiss-Prot
Match: PAO3_ARATH (Polyamine oxidase 3 OS=Arabidopsis thaliana GN=PAO3 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.319e-22 Identity = 72/196 (36.73%), Postives = 103/196 (52.55%), Query Frame = 1 Query: 25 FEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGL 612 F D + +PLGVLKSG I F P+LPQ K +AI LG G+ NK+ + F VFW +++ G + ++S +FL AT P+L+ + AG+ A E A L+ I + PI + +RWG D SLGSYS V D Y+ + + + LFFAGEAT YP ++HGA+ +G+ Sbjct: 267 FVADAAVIALPLGVLKSGMITFEPKLPQWKQEAINDLGVGIENKIILNFDNVFW-PNVEFLG-VVAETSYGCSYFLNLHKAT--SHPVLVYMPAGQLARDIEKKSDEAAANFAFSQLQKILP----DASSPINYLVSRWGSDINSLGSYSYDIVNKPHDLYERLRVPLDN--LFFAGEATSSSYPGSVHGAYSTGV 452
BLAST of CV884748 vs. ExPASy Swiss-Prot
Match: PAOX_HUMAN (Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Homo sapiens GN=PAOX PE=1 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 9.623e-22 Identity = 71/225 (31.56%), Postives = 117/225 (52.00%), Query Frame = 1 Query: 25 FEGDMVLCTVPLGVLKSGSIKFI-PELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGE---------------FFLFYSYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIY-EPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESV-GDG-----RLFFAGEATIRRYPATMHGAFLSGLRETAKM 630 F V+ TVPLG L+ F P LP K +AI+++G+G NK+ + F FWE D + +D+S + F + ++A+V +L +AG + E++ + + + Q+L+ + P+ +P P + +RW P++ GSYS VAVG++G D D++A+ + DG ++ FAGEAT R + +T HGA LSG RE ++ Sbjct: 416 FPAHHVIVTVPLGFLREHLDTFFDPPLPAEKAEAIRKIGFGTNNKIFLEFEEPFWEPDCQLIQLVWEDTSPLEDAAPELQDAWFRKLIGFVVLPAFASVH---VLCGFIAGLESEFMETLSDEEVLLCLTQVLRRVTGNPR---LPAPKSVLRSRWHSAPYTRGSYSYVAVGSTGGDLDLLAQPLPADGAGAQLQILFAGEATHRTFYSTTHGALLSGWREADRL 634
BLAST of CV884748 vs. ExPASy Swiss-Prot
Match: PAOX_BOVIN (Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Bos taurus GN=PAOX PE=1 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 9.623e-22 Identity = 70/221 (31.67%), Postives = 107/221 (48.42%), Query Frame = 1 Query: 25 FEGDMVLCTVPLGVLKSGSIKFI-PELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGE------------FFLFYSYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESV-GDGR-----LFFAGEATIRRYPATMHGAFLSGLRETAKM 630 F V+ TVPLG K F P LP K++AI+++G+G NK+ + F FWE D + +D S + F+ +L +AG + E++ D + + Q+L+ + + P + C W P++ GSYS VAVG+SGDD D +A+ + DG+ + FAGEAT R + +T HGA LSG RE ++ Sbjct: 279 FPAHHVVVTVPLGFFKKHLDTFFEPPLPTEKVEAIRKIGFGTNNKIFLEFEEPFWEPDCQHIQVVWEDMSPLEDTAPELQDAWFKKLIGFWVLPPFQASHVLCGFIAGLESEFMETLSDEDVLRSLTQVLRRVTGNPQLPAPRSMLRSC--WHSAPYTRGSYSYVAVGSSGDDMDRLAQPLPSDGKGAQLQVLFAGEATHRTFYSTTHGALLSGWREADRL 497
BLAST of CV884748 vs. ExPASy Swiss-Prot
Match: AMX1_CAEEL (Amine oxidase family member 1 OS=Caenorhabditis elegans GN=amx-1 PE=2 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 3.657e-21 Identity = 74/213 (34.74%), Postives = 111/213 (52.11%), Query Frame = 1 Query: 28 EGDMVLCTVPLGVLKSGSIK-FIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWET-DLDT-----FGHLTDDSSSRGEFFLFYSYATVAGGP----LLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGD-DYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKM 630 E D V+ T L VLKS K F+P LP K AI LG GL+ K+A+ F FW+T D D FG ++D + R F +FY ++ +L++ V E + + ++ K L+ ++ IN P+ + + WG D F SY+ V G+ GD Y+ + +S+ D +L+FAGE TI P TM GA++SGLRE ++ Sbjct: 604 EFDKVVITTSLSVLKSNHSKMFVPPLPIEKQKAIDDLGAGLIEKIAVKFDRRFWDTVDADGLRTEYFGKVSDCKTDRSLFNIFYDFSGKDPNGEDTFVLMSYVTAEHVNLVNVLTESEVADKFCATLRKMFPSAVIN---PLGHMMSHWGADRFVGMSYTFVPFGSDGDATYNQLKKSI-DEKLYFAGEHTIAAEPQTMAGAYISGLREAGQI 812
BLAST of CV884748 vs. ExPASy Swiss-Prot
Match: PAO_MAIZE (Polyamine oxidase OS=Zea mays GN=PAO PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.096e-20 Identity = 63/220 (28.64%), Postives = 108/220 (49.09%), Query Frame = 1 Query: 16 SQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSY-ATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANARALRMKVK 672 + V+ D V+ + LGVL+S I+F P+LP K+ AI + + K+ + FP FW L SS RG + ++ + +L+ V E + + E +++Q+L+ ++ G +VP+ + RW D F G++SN VG + +YD + V GR++F GE T Y +HGA+LSG+ + +CA + + V+ Sbjct: 282 NSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLY-ASSRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMF--PGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPV--GRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKKMCKYHVQ 496 The following BLAST results are available for this feature:
BLAST of CV884748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884748 ID=CV884748; Name=CV884748; organism=Citrus sinensis; type=EST; length=775bpback to top |