CV884728

Overview
NameCV884728
Unique NameCV884728
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 4.128e-61
Identity = 110/241 (45.64%), Postives = 157/241 (65.15%), Query Frame = 3
Query:   12 SMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSYVMEFYK 734
            S+ P + L  DKVMM  WF L D ILEG + + +A GM  +DY GTD RFN VFN GM   T  V+ K++++Y GF ++  LVDV            +K+ HIKGIN+D+PHVI DA SYPG+EHVGG+M++ IP+ DAI MKW+LH++ DE+C+KIL  CY++L   GK++++ S +P +P+    S   F LD   L+    G+ER+ ++F ALA + GF  ++  C   +++VME YK
Sbjct:  124 SLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHIKGINYDLPHVIADAPSYPGVEHVGGNMFESIPQADAIFMKWVLHDWSDEHCVKILNKCYESLAKGGKIILVESLIPVIPEDNLESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFSTVDVICCAYDTWVMELYK 364          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.960e-60
Identity = 107/244 (43.85%), Postives = 155/244 (63.52%), Query Frame = 3
Query:    3 NGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSYVMEFYK 734
            +GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD+RFN VFN GM   +  +  K+++ Y GF+ ++ LVDV            S++PHI G+NFD+PHVI +A  +PG+ HVGGDM+  +P GDAILMKW+LH++ D +C  +L+NCY ALP +GKV+V+   LP   ++T  ++  F +D I L   P G+ER  +EF  LA  AGF G        N++ +EF K
Sbjct:  121 DGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHISGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 364          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 7.785e-60
Identity = 110/245 (44.90%), Postives = 156/245 (63.67%), Query Frame = 3
Query:    3 NGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPE-GDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSYVMEFYK 734
            +GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD+RFN VFN GM   +  +  K+++ Y GF   + +VDV            S++PHI+GIN+D+PHVI +A  +PG+EHVGGDM+  +P  GDAILMKW+LH++ DE+C ++L+NCY ALP  GKV+V+   LPE  D+T   +  F +D I L   P G+ER  +EF  LA  AGF G        N++ +EF K
Sbjct:  124 DGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHIRGINYDLPHVISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.265e-59
Identity = 108/244 (44.26%), Postives = 154/244 (63.11%), Query Frame = 3
Query:    3 NGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSYVMEFYK 734
            +GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN VFN GM   +  +  K++E Y GF+ ++ LVDV            S +P IKGINFD+PHVI +A  +PG++HVGGDM++ +P GDAILMKW+LH++ D +C  +L+NCY ALP +GKV+++   LP   ++   ++  F +D I L   P GRER  +EF  LA  AGF G        N++ +EF K
Sbjct:  119 DGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQIKGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.163e-55
Identity = 98/212 (46.23%), Postives = 141/212 (66.51%), Query Frame = 3
Query:    3 NGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERT 638
            +GVS+ P   +  D+V +  W+ +KD ILEG + ++KA GM  +DY GTD RFN++FN  M   ++ ++ KI+E+Y GF+ +  +VDV            +KYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  IP GDA+ MKW+ H++ DE+C K+L+NCY ALP +G+V+V    LP  PD + +++    +D I L     G+ERT
Sbjct:  102 DGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICHDWSDEHCAKLLKNCYDALPVNGRVIVAEYILPAYPDQSLSTKGVIHMDCIMLTHFSGGKERT 313          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.510e-50
Identity = 99/243 (40.74%), Postives = 149/243 (61.32%), Query Frame = 3
Query:    9 VSMRPYMNLSLDKVMMPGWFQLKDQILE-GELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSYVMEFYK 734
            VS+ P +  + DK ++  ++ +KD +LE G + +++  GMDF+ Y G + R N+ FN  M   ++   +++ + YKGF N+  LVDV            +K+PHI+GINF++PHVI DA  YPG+EHV GDM++ +P    IL+KW+LH++DD+  IKIL+NC+KALP +G V+VI   LP+V  +   S ++   D + +   P G+ERT  EF  LA  AGF    F       +VMEF+K
Sbjct:  136 VSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPHIRGINFELPHVIGDAPDYPGVEHVPGDMFEGVPNAQNILLKWVLHDWDDDRSIKILKNCWKALPENGTVIVIEFVLPQVLGNNAESFNALTPDLLMMALNPGGKERTTIEFDGLAKAAGFAETKFFPISQGLHVMEFHK 378          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.416e-45
Identity = 90/226 (39.82%), Postives = 140/226 (61.95%), Query Frame = 3
Query:   63 WFQLKDQILEGELSYNKAL-GMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKGINFECNVCNSY-VMEFYK 734
            W   K+ +++ ++   K + G+  Y+++G D + N++FN  M+   +  + +++E Y GF+ I+ LVDV            SKYP IKGINFD+P VI++A    G+EHVGGDM+  +P+GDA+++K + HN+ DE CI+ L NC+KAL  +GKV+++   LPE P+++E S+    LD +  I +  GRERT K++  L+  +GF      C   NS  VMEFYK
Sbjct:  148 WMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITV-GGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.211e-33
Identity = 79/226 (34.96%), Postives = 124/226 (54.87%), Query Frame = 3
Query:   12 SMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND-GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKG 683
            SM P +     K  M  W  +KD + +   ++ KA+GM  ++YL      +++FN GM G+T  + + ++   +  FQ I  LVDV              +PHIK   FD+PHVI ++   P +E +GGDM++ +P   AI++K +LH+++DE+ IKIL+ C  A+P D GKV++++  L E  D  E S    ILD   L+    G+ERT + +  +   AGF G
Sbjct:  110 SMVPMILGMTQKDFMTPWHSMKDGLSDNGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAISDAFPHIKCTLFDLPHVIANSYDLPNIERIGGDMFKSVPSAQAIILKLILHDWNDEDSIKILKQCRNAVPKDGGKVIIVDVALDEESDH-ELSSTRLILDIDMLVN-TGGKERTKEVWEKIVKSAGFSG 333          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.442e-29
Identity = 75/217 (34.56%), Postives = 120/217 (55.30%), Query Frame = 3
Query:   42 DKVMMPGWFQLKDQIL-EGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALP-NDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFKG 683
            DK  M  W  LKD +  E   ++ KALG + + Y+      N++FN  M   +  +++ +V+     F  IT LVDV            + +PHIK   +D+PHVI D+  Y  +  V GDM++ IP+ DAI+MK +LH++DD+ CI+IL+ C +A+P   GKV++++  L  V      ++    LD   ++    G+ERT +E+  L  +AG+KG
Sbjct:  115 DKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIANAFPHIKCTVYDLPHVIADSPGYSEVHCVAGDMFKFIPKADAIMMKCILHDWDDKECIEILKRCKEAVPVKGGKVIIVDIVL-NVQSEHPYTKMRLTLDLDMMLN-TGGKERTEEEWKKLIHDAGYKG 329          
BLAST of CV884728 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.026e-27
Identity = 68/226 (30.09%), Postives = 121/226 (53.54%), Query Frame = 3
Query:   15 MRPYMNLSLDKVMMPGWFQLKDQILEGELS-YNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND---GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTXKEFTALAIEAGFK 680
            + P +   LD  +   + +LK  I E +L+ +   LG  F+D+L  +  +N  FN+ M   +  +   + +    F  +  +VDV              +P +K I FD P V+++ S    + +VGGDM+  IP  DA+L+K++LHN+ D++C++IL+ C +A+ ND   GKV +I+  + E  D  + ++   ++D    +   +G+ER  +E+  L IEAGF+
Sbjct:  111 LAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDEKKDENQVTQIKLLMDV--NMACLNGKERNEEEWKKLFIEAGFQ 334          
The following BLAST results are available for this feature:
BLAST of CV884728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
IMT1_MESCR4.128e-6145.64Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_MAIZE5.960e-6043.85Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT1_ORYSJ7.785e-6044.90Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_SACOF2.265e-5944.26Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_EUCGL1.163e-5546.23Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
SMT_COPJA2.510e-5040.74(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA5.416e-4539.82Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
4OMT_COPJA6.211e-3334.963'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
6OMT_COPJA2.442e-2934.56(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
7OMT6_MEDSA1.026e-2730.09Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010C02_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884728 ID=CV884728; Name=CV884728; organism=Citrus sinensis; type=EST; length=843bp
AAAACGGCGTCTCAATGCGTCCCTATATGAACTTGTCTCTTGACAAAGTA
ATGATGCCTGGCTGGTTCCAATTGAAAGACCAAATTCTTGAAGGAGAACT
TTCGTATAATAAAGCCCTCGGAATGGATTTCTACGATTATCTGGGCACCG
ACTCCAGGTTCAATGAAGTTTTCAACAATGGAATGATCGGCCAGACTTCT
TTTGTAATCAATAAGATTGTAGAATCCTACAAAGGCTTTCAGAATATTAC
GCGCCTTGTTGACGTTGGCGGTGGTTTAGGAATCACCCTTGCGACCATAA
TTTCCAAATACCCTCATATTAAGGGTATTAATTTTGACGTACCTCATGTT
ATAAAAGATGCCTCATCTTATCCCGGCATGGAACATGTTGGCGGAGATAT
GTACCAAAAAATTCCAGAGGGGGATGCCATTTTAATGAAGTGGATGCTTC
ATAATTTTGATGATGAGAATTGCATAAAGATACTGAGGAATTGTTACAAA
GCTCTTCCAAATGATGGAAAGGTACTTGTTATTAACTCAACGTTGCCAGA
AGTGCCTGACAGTACCGAGGCTTCAAGGGATTCCTTCATTTTAGATGCAA
TTTTTTTAATCCAAATTCCTCATGGAAGGGAGCGGACCANAAAGGAGTTC
ACTGCATTGGCAATCGAAGCTGGATTTAAGGGTATCAACTTTGAATGTAA
CGTTTGCAATTCCTATGTCATGGAATTCTACAAGTAACTTTGAAGCTAGA
TTGCTTCATTCTTTCTTTATCAGAAAGATGCATCTTCTCAATTTTAATTT
GGAGTGTCGATACTCCATTTTCTTTTCTGTAACTTTCTGTTTT
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