CV884723

Overview
NameCV884723
Unique NameCV884723
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_STRPN (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae GN=glgC PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 60/243 (24.69%), Postives = 106/243 (43.62%), Query Frame = 2
Query:  137 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEA------KLGIKIICSQETEP-----LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLN-------PAVLDRIELRPTSIEKEVFPKIALEGK-LFAMVLPGFWMDIG 799
            M ALIL GG GTRL  LT S+ KP V+F  +  I+   +      G+  V +   YQP  + N +    +        G+ I+             GT+  +    D +     E   +L+ D I +  + +M++ HK +    ++ V  V   E S++G ++  D+  ++ +F EKP      K + GIY+ +           ++ ++  +   K V P     G+ ++A    G+W D+G
Sbjct:    5 MLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVVTQYQPLALNNHIGNGSSWGLDGINSGVSILQPYSASEGNRWFEGTSHAIYQNIDYIDSVNPEYVLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEASRFG-IMNTDANNRIVEFEEKPAQPKSTKASMGIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVG 246          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_STRPJ (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=glgC PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 60/243 (24.69%), Postives = 106/243 (43.62%), Query Frame = 2
Query:  137 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEA------KLGIKIICSQETEP-----LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLN-------PAVLDRIELRPTSIEKEVFPKIALEGK-LFAMVLPGFWMDIG 799
            M ALIL GG GTRL  LT S+ KP V+F  +  I+   +      G+  V +   YQP  + N +    +        G+ I+             GT+  +    D +     E   +L+ D I +  + +M++ HK +    ++ V  V   E S++G ++  D+  ++ +F EKP      K + GIY+ +           ++ ++  +   K V P     G+ ++A    G+W D+G
Sbjct:    5 MLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVVTQYQPLALNNHIGNGSSWGLDGINSGVSILQPYSASEGNRWFEGTSHAIYQNIDYIDSVNPEYVLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEASRFG-IMNTDANNRIVEFEEKPAQPKSTKASMGIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVG 246          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_STRPI (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=glgC PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 60/243 (24.69%), Postives = 106/243 (43.62%), Query Frame = 2
Query:  137 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEA------KLGIKIICSQETEP-----LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLN-------PAVLDRIELRPTSIEKEVFPKIALEGK-LFAMVLPGFWMDIG 799
            M ALIL GG GTRL  LT S+ KP V+F  +  I+   +      G+  V +   YQP  + N +    +        G+ I+             GT+  +    D +     E   +L+ D I +  + +M++ HK +    ++ V  V   E S++G ++  D+  ++ +F EKP      K + GIY+ +           ++ ++  +   K V P     G+ ++A    G+W D+G
Sbjct:    5 MLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVVTQYQPLALNNHIGNGSSWGLDGINSGVSILQPYSASEGNRWFEGTSHAIYQNIDYIDSVNPEYVLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEASRFG-IMNTDANNRIVEFEEKPAQPKSTKASMGIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVG 246          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_STRP7 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain 70585) GN=glgC PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 60/243 (24.69%), Postives = 106/243 (43.62%), Query Frame = 2
Query:  137 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEA------KLGIKIICSQETEP-----LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLN-------PAVLDRIELRPTSIEKEVFPKIALEGK-LFAMVLPGFWMDIG 799
            M ALIL GG GTRL  LT S+ KP V+F  +  I+   +      G+  V +   YQP  + N +    +        G+ I+             GT+  +    D +     E   +L+ D I +  + +M++ HK +    ++ V  V   E S++G ++  D+  ++ +F EKP      K + GIY+ +           ++ ++  +   K V P     G+ ++A    G+W D+G
Sbjct:    5 MLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVVTQYQPLALNNHIGNGSSWGLDGINSGVSILQPYSASEGNRWFEGTSHAIYQNIDYIDSVNPEYVLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEASRFG-IMNTDANNRIVEFEEKPAQPKSTKASMGIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVG 246          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_STRU0 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=glgC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 65/250 (26.00%), Postives = 107/250 (42.80%), Query Frame = 2
Query:  137 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVM------------------LNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI-------ELRPTSIEKEVFPKIALEG-KLFAMVLPGFWMDIG 799
            M ALIL GG GTRL  LT ++ KP V+F  +  I+   +      G+  V +   YQP V+                  +  L+ F A  G K          GT+  +    D +     E   +L+ D I +  + EM++ HK +    ++ V  V   E S++G ++  DS  ++ +F EKP+     K + GIY+ N   L ++        +  +   K V P     G +++     G+W D+G
Sbjct:    5 MLALILAGGQGTRLGKLTQNIAKPAVQFGGRYRIIDFALSNCANSGIDNVGVITQYQPLVLNSHIGNGSSWGLEGINRGVTILQPFSATEGNKWF-------EGTSHAIYQNIDYIDSINPEYVLILSGDHIYKMDYEEMLQVHKDNMASLTVAVLDVPLKEASRFG-IMNTDSNDRIVEFEEKPEHPKSTKASMGIYIFNWPRLRKMLVDSENGNIDMSDFGKNVIPAYLESGERVYTYNFNGYWKDVG 246          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_STRPS (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain CGSP14) GN=glgC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 60/243 (24.69%), Postives = 106/243 (43.62%), Query Frame = 2
Query:  137 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEA------KLGIKIICSQETEP-----LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLN-------PAVLDRIELRPTSIEKEVFPK-IALEGKLFAMVLPGFWMDIG 799
            M ALIL GG GTRL  LT S+ KP V+F  +  I+   +      G+  V +   YQP  + N +    +        G+ I+             GT+  +    D +     E   +L+ D I +  + +M++ HK +    ++ V  V   E S++G ++  D+  ++ +F EKP      K + GIY+ +           ++ ++  +   K V P  + L   ++A    G+W D+G
Sbjct:    5 MLALILAGGQGTRLAKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVVTQYQPLALNNHIGNGSSWGLDGIDSGVSILQPYSASEGNRWFEGTSHAIYQNIDYIDSVNPEYVLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEASRFG-IMNTDANNRIVEFEEKPAQPKSTKASMGIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLELGESVYAYEFSGYWKDVG 246          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_STRP4 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=glgC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 60/243 (24.69%), Postives = 106/243 (43.62%), Query Frame = 2
Query:  137 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEA------KLGIKIICSQETEP-----LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLN-------PAVLDRIELRPTSIEKEVFPKIALEGK-LFAMVLPGFWMDIG 799
            M ALIL GG GTRL  LT S+ KP V+F  +  I+   +      G+  V +   YQP  + N +    +        G+ I+             GT+  +    D +     E   +L+ D I +  + +M++ HK +    ++ V  V   E S++G ++  D+  ++ +F EKP      K + GIY+ +           ++ ++  +   K V P     G+ ++A    G+W D+G
Sbjct:    5 MLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVVTQYQPLALNNHIGNGSSWGLDGINSGVSILQPYSASEGNRWFEGTSHAIYQNIDYIDSVNPEYVLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEASRFG-IMNTDANNRIVEFEEKPAQPKSTKASMGIYIFDWQRLRNMLVAAEKSKVGMSXFGKNVIPNYLESGESVYAYEFSGYWKDVG 246          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_STRGC (Glucose-1-phosphate adenylyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=glgC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 60/243 (24.69%), Postives = 107/243 (44.03%), Query Frame = 2
Query:  137 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEA------KLGIKIICSQETEP-----LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLN-------PAVLDRIELRPTSIEKEVFPKIALEGK-LFAMVLPGFWMDIG 799
            M ALIL GG GTRL  LT S+ KP V+F  +  I+   +      G+  V +   YQP  + + +    +        G+ I+             GT+  +    D +     E   +L+ D I +  + +M++ HK +    ++ V  V   E S++G ++  D+  ++ +F EKP+     K + GIY+ +         V ++  +  +   K V P     G+ ++A    G+W D+G
Sbjct:    5 MLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVITQYQPLALNSHIGNGSSWGLDGINTGVSILQPYSASEGNRWFEGTSHAIFQNIDYIDSINPEYVLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEASRFG-IMNTDANNRIVEFEEKPENPKSTKASMGIYIFDWQRLRNMLVVAEKSNVDMSDFGKNVIPNYLESGESVYAYEFAGYWKDVG 246          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_BACSU (Glucose-1-phosphate adenylyltransferase OS=Bacillus subtilis GN=glgC PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 69/265 (26.04%), Postives = 120/265 (45.28%), Query Frame = 2
Query:  143 ALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEA------KLGIKII-----CSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLN-PAVLDRIEL---RPTS---IEKEVFPKIALE-GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKL 871
            A++L GG G+RL  LT ++ KP V F  K  I+   +      G+  V +   YQP  + +++    A        G+ ++      S+     GTA  +    + L     E   +L+ D I +  + +M+++H     + +I V +V  +E S++G ++  +  G +  F EKPK    N  + GIY+ N P +   +E+    P S     K++ P +  E  KL A    G+W D+G  +         +D L++ S  KL
Sbjct:    7 AMLLAGGKGSRLSGLTKNMAKPAVSFGGKYRIIDFTLSNCSNSGIDTVGILTQYQPLELNSYIGIGSAWDLDRYNGGVTVLPPYAESSEVKWYKGTASSIYENLNYLNQYDPEYVLILSGDHIYKMDYGKMLDYHIEKKADVTISVIEVGWEEASRFG-IMKANPDGTITHFDEKPKFPKSNLASMGIYIFNWPLLKQYLEMDDQNPYSSHDFGKDIIPLLLEEKKKLSAYPFKGYWKDVGTVQSL---WEANMDLLKEDSELKL 267          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: EI2BG_BOVIN (Translation initiation factor eIF-2B subunit gamma OS=Bos taurus GN=EIF2B3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 42/142 (29.58%), Postives = 76/142 (53.52%), Query Frame = 2
Query:  140 KALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAI--NYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDE 559
            +A+++  G G+R+  LT S+PKPL+   NKP+I + +  L+ VG  EV++    + Q  +  +F K    K+ + I+C  +   +GTA  L     KL  D      VL+ D+I++    E+++  +AH    ++++ K  E
Sbjct:    4 QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVITTKDVQKALCADFNK---MKMKLDIVCIPDEADMGTADSLRHIYQKLKTDV----LVLSCDLITDVALHEVVDLFRAHDASLAMLMRKGQE 138          
The following BLAST results are available for this feature:
BLAST of CV884723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
GLGC_STRPN4.496e-1124.69Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRPJ4.496e-1124.69Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRPI4.496e-1124.69Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRP74.496e-1124.69Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRU05.872e-1126.00Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRPS5.872e-1124.69Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRP45.872e-1124.69Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRGC5.872e-1124.69Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_BACSU5.872e-1126.04Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
EI2BG_BOVIN5.872e-1129.58Translation initiation factor eIF-2B subunit gamma... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010B11_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T7_B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884723 ID=CV884723; Name=CV884723; organism=Citrus sinensis; type=EST; length=920bp
CGAGCGCGCGAGCTCGCCTCATCCGTTGACTGAGCTGTCGGTCCCGAGTC
ACGACTCGCGACTCTTGTTTTTCAACTCAGTTGTTTGCCGTTCGGATCCG
GTCTTAATTAAAGGATAAAGCAGGCTCCGTATCACAATGAAGGCACTTAT
TCTTGTTGGAGGGTTCGGAACACGGTTGAGGCCGTTGACGCTTAGTGTCC
CTAAGCCACTTGTTGAATTTGCTAACAAACCCATGATCCTGCATCAGATA
GAGGCCCTTAAGGCAGTTGGAGTGACTGAAGTAGTTTTGGCTATTAACTA
CCAGCCAGAGGTGATGTTGAACTTTTTGAAGGAATTTGAAGCAAAGCTTG
GGATCAAGATCATCTGCTCACAAGAGACTGAGCCACTGGGCACTGCTGGT
CCTCTGGCTCTGGCTAGAGACAAATTGATTGACGATACTGGTGAGCCATT
TTTCGTCCTTAACAGTGATGTTATTAGTGAGTACCCATTTGCAGAAATGA
TTGAATTCCACAAAGCACATGGAGGAGAGGCCTCCATCATGGTAACCAAG
GTGGATGAGCCATCAAAATATGGTGTGGTGGTTATGGAAGACTCTACTGG
AAAAGTTGAGAAATTCGTAGAGAAACCTAAATTATTTGTTGGTAACAAAA
TTAATGCTGGAATTTATCTTTTGAACCCTGCGGTTCTTGATCGCATTGAG
CTGAGGCCCACCTCCATTGAGAAAGAGGTCTTTCCAAAAATTGCTTTAGA
GGGAAAGCTCTTCGCGATGGTTCTTCCAGGTTTCTGGATGGACATTGGAC
AGCCGAGGGATTACATTACAGGCTTGAGACTCTATCTGGACTCCCTGAGG
AAGAAGTCCTCATTCAAGTTGGCCACTGGTGCTAACATTGTAGGCAATGT
CTTGGTGCATGAGAGTGCTC
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