CV884723

Overview
NameCV884723
Unique NameCV884723
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_BACCQ (Glucose-1-phosphate adenylyltransferase OS=Bacillus cereus (strain Q1) GN=glgC PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.264e-13
Identity = 73/265 (27.55%), Postives = 122/265 (46.04%), Query Frame = 2
Query:  143 ALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLK-----EFEAKLGIKIICSQETEP------LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAVL-DRIELRPTSIE------KEVFPKIALEG-KLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKL 871
            A++L GG G+RL  LT ++ KP V F  K  I+   +      G+  V +   YQP  + N++      + +   G   +     E        GTA  +    + L     E   +L+ D I +  +++M+++H     + SI V +V  DE S++G++   +    VE F EKP+    N  + GIY+ N A+L + +E+   + E      K+V P +  EG KL A    G+W D+G  +         +D LR ++S  L
Sbjct:    9 AMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLDRVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEYVLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDEASRFGIMNTNEEMEIVE-FEEKPQFPRSNLASMGIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSL---WEANMDLLRDETSLNL 269          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_BACC1 (Glucose-1-phosphate adenylyltransferase OS=Bacillus cereus (strain ATCC 10987) GN=glgC PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.264e-13
Identity = 73/265 (27.55%), Postives = 122/265 (46.04%), Query Frame = 2
Query:  143 ALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLK-----EFEAKLGIKIICSQETEP------LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAVL-DRIELRPTSIE------KEVFPKIALEG-KLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKL 871
            A++L GG G+RL  LT ++ KP V F  K  I+   +      G+  V +   YQP  + N++      + +   G   +     E        GTA  +    + L     E   +L+ D I +  +++M+++H     + SI V +V  DE S++G++   +    VE F EKP+    N  + GIY+ N A+L + +E+   + E      K+V P +  EG KL A    G+W D+G  +         +D LR ++S  L
Sbjct:    9 AMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLDRVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEYVLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDEASRFGIMNTNEEMEIVE-FEEKPQFPRSNLASMGIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSL---WEANMDLLRDETSLNL 269          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_BACAN (Glucose-1-phosphate adenylyltransferase OS=Bacillus anthracis GN=glgC PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.264e-13
Identity = 73/265 (27.55%), Postives = 122/265 (46.04%), Query Frame = 2
Query:  143 ALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLK-----EFEAKLGIKIICSQETEP------LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAVL-DRIELRPTSIE------KEVFPKIALEG-KLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKL 871
            A++L GG G+RL  LT ++ KP V F  K  I+   +      G+  V +   YQP  + N++      + +   G   +     E        GTA  +    + L     E   +L+ D I +  +++M+++H     + SI V +V  DE S++G++   +    VE F EKP+    N  + GIY+ N A+L + +E+   + E      K+V P +  EG KL A    G+W D+G  +         +D LR ++S  L
Sbjct:    9 AMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLDRVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEYVLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDEASRFGIMNTNEEMEIVE-FEEKPQFPRSNLASMGIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSL---WEANMDLLRDETSLNL 269          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_THEAB (Glucose-1-phosphate adenylyltransferase OS=Thermosipho africanus (strain TCF52B) GN=glgC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.651e-13
Identity = 64/245 (26.12%), Postives = 113/245 (46.12%), Query Frame = 2
Query:  143 ALILVGGFGTRLRPLTLSVPKPLVEFANK-PMILHQIEALKAVGVTEVVLAINYQPEVM---LNFLKEFEAKL---GIKIICSQETEPL-----GTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASI--MVTKVDEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIE-------KEVFPKIALEGKLFAMVLPGFWMDIGQPRDY 814
            ALIL GG GTRL  LT  + KP V+F  K  +I   +      G+ ++ +   Y+P ++   +   K ++      G+ I+    TE       GTA  +    + + D   E   +L+ D I    + E++++HKA    A++  M   + E S++G++V  D   ++ +F EKPK       + GIY+   + +  + +     +       K++ PKI    ++FA    G+W D+G    Y
Sbjct:    6 ALILAGGQGTRLGVLTEKIAKPAVQFGGKYRLIDFTLSNCVNSGIYKIGVLTQYKPHLLNQHIGIGKPWDLDRKDGGVTILQPYYTEKKGVWYNGTADAVYRNIEFVDDYNPEYVVILSGDHIYSMDYNELLDYHKAKSALATVACMEVPLSEASRFGIMV-TDLENRIIEFQEKPKQPKSTLASLGIYVFQWSFIREVLIEDAKNDQSSHDFGKDIIPKIIQTERVFAFPFDGYWKDVGTIYSY 249          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLMU_CLOD6 (Bifunctional protein glmU OS=Clostridium difficile (strain 630) GN=glmU PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.156e-13
Identity = 52/186 (27.96%), Postives = 93/186 (50.00%), Query Frame = 2
Query:  131 ITMKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNK----INAGIYLLN 676
            +  KA+IL  G GTR++      PK + +   K M+ H I+  K  GV + V+ + ++ +V+       + KL  +II + +TE LGT   + +A++ + D+        ++ +I E     + E+H  +   A+++ T+V  P+ YG ++  D  G + K VE+       K    IN+GIY  N
Sbjct:    1 MNFKAIILAAGKGTRMKS---KYPKVIHKVCGKEMVNHIIDVSKKSGVKDTVVILGHEADVV-------KEKLAEEIIIAMQTEQLGTGHAVKMAKEYINDEDTIVVLCGDTPLIKEETLKRLFEYHIENKYHATVLTTRVGNPTGYGRII-RDKKGDLLKIVEQKDANSEEKMISEINSGIYCFN 175          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_BACCR (Glucose-1-phosphate adenylyltransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=glgC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.816e-13
Identity = 72/265 (27.17%), Postives = 122/265 (46.04%), Query Frame = 2
Query:  143 ALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLK-----EFEAKLGIKIICSQETEP------LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAVL-DRIELRPTSIE------KEVFPKIALEG-KLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKL 871
            A++L GG G+RL  LT ++ KP V F  K  I+   +      G+  V +   YQP  + N++      + +   G   +     E        GTA  +    + L     E   +L+ D I +  +++M+++H     + SI V +V  DE S++G++   +    VE F EKP+    N  + GIY+ N ++L + +E+   + E      K+V P +  EG KL A    G+W D+G  +         +D LR ++S  L
Sbjct:    9 AMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLDRVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEYVLILSGDHIYKMDYSKMLDYHIEKESDVSISVIEVPWDEASRFGIMNTNEEMEIVE-FEEKPQFPRSNLASMGIYIFNWSILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSL---WEANMDLLRDETSLNL 269          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_BACAH (Glucose-1-phosphate adenylyltransferase OS=Bacillus thuringiensis (strain Al Hakam) GN=glgC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.816e-13
Identity = 72/265 (27.17%), Postives = 122/265 (46.04%), Query Frame = 2
Query:  143 ALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLK-----EFEAKLGIKIICSQETEP------LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAVL-DRIELRPTSIE------KEVFPKIALEG-KLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKL 871
            A++L GG G+RL  LT ++ KP V F  K  I+   +      G+  V +   YQP  + N++      + +   G   +     E        GTA  +    + L     +   +L+ D I +  +++M+++H     + SI V +V  DE S++G++   +    VE F EKP+    N  + GIY+ N A+L + +E+   + E      K+V P +  EG KL A    G+W D+G  +         +D LR ++S  L
Sbjct:    9 AMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLDRVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPDYVLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDEASRFGIMNTNEEMEIVE-FEEKPQFPRSNLASMGIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSL---WEANMDLLRDETSLNL 269          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: RMLA_STRMU (Glucose-1-phosphate thymidylyltransferase OS=Streptococcus mutans GN=rmlA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.803e-13
Identity = 61/257 (23.74%), Postives = 119/257 (46.30%), Query Frame = 2
Query:  137 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLD---------RIELRPTSIEKEVFPKIALEGKLFAMVLP-GF-WMDIGQPRDYITGLRLYLDSLRKKSSFKLA 874
            MK +IL GG GTRL PLT +  K L+   +KPMI + +  L   G+ ++++    Q       L +  ++ GIK+  +++  P G A    +  + + DD      +L  ++      + M++   +    A++   +V +P ++GVV  ++    +    EKP+    +    G+Y  + +V+D         R EL  T + K    +    G L   V+  GF W+D G     +   + Y++++++  + ++A
Sbjct:    1 MKGIILAGGSGTRLYPLTRAASKQLMPVYDKPMIYYPLSTLMLAGIKDILIISTPQDLPRFKELLQDGSEFGIKLSYAEQPSPDGLAQAFIIGEEFIGDD--HVALILGDNIYYGPGLSRMLQKAASKESGATVFGYQVKDPERFGVVEFDNDRNAI-SIEEKPEHPKSHYAVTGLYFYDNSVVDIAKNIKPSPRGELEITDVNKAYLDR----GDLSVEVMERGFAWLDTGTHESLLEAAQ-YIETVQRMQNLQVA 249          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: Y1334_METJA (Putative UTP--glucose-1-phosphate uridylyltransferase OS=Methanocaldococcus jannaschii GN=MJ1334 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12
Identity = 62/221 (28.05%), Postives = 108/221 (48.87%), Query Frame = 2
Query:  140 KALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLA-------------INYQPEV---------MLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFV--LNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVV---VMEDSTGKVEKFVEKPKL--FVGNKINAGIYLLNPAVLDRIELRP 709
            KA+I V GFGTRL P+T + PK ++   NKP++ + +E L   GV +++               +NY+ E          +L  +KE +    I  +  +E + LG A    L  ++ +   GE +F+  +   + S+    ++I+ H+ +G    I + +V  ++  KYGV+    +E    K++  VEKPK+     N I  G YLL+P + ++I   P
Sbjct:    4 KAVIPVAGFGTRLLPITKAQPKEMLPVVNKPIVQYVVEDLVEAGVKDILFVTGKGKQAIENHFDVNYELECKLEKSGKYELLKIIKEIDRLGNIFYVRQKEQKGLGDA---ILYGEEFV---GEEYFIAMVGDTIYSKNIVKDLIKAHEKYGCSV-IALERVPKEDVYKYGVIDGEEIEKGVYKIKNMVEKPKVEEAPSNLIITGAYLLSPKIFEKIRETP 217          
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: RMLA_SALAN (Glucose-1-phosphate thymidylyltransferase OS=Salmonella anatum GN=rmlA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.070e-12
Identity = 62/254 (24.41%), Postives = 122/254 (48.03%), Query Frame = 2
Query:  134 TMKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIE-LRPTS---IEKEVFPKIALE-GKL-FAMVLPGF-WMDIGQPRDYITGLRLYLDSLRKKSSFKLA 874
            T K +IL GG GTRL P+T++V K L+   +KPMI + +  L   G+ ++++    Q       L    ++ G+ +    +  P G A    +  + + +D  +   VL  ++   +   +++E        A++    V++P +YGVV   D +G      EKP     N    G+Y  + +V++  + L+P++   +E     +I +E G+L  AM+  G+ W+D G  +  I     ++ ++ ++   K++
Sbjct:    3 TRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEFIGND--DCALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYGVVEF-DQSGTAVSLEEKPLQPKSNYAVTGLYFYDNSVVEMAKNLKPSARGELEITDINRIYMEQGRLSVAMMGRGYAWLDTGTHQSLIEASN-FIATIEERQGLKVS 252          
The following BLAST results are available for this feature:
BLAST of CV884723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
GLGC_BACCQ1.264e-1327.55Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACC11.264e-1327.55Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACAN1.264e-1327.55Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_THEAB1.651e-1326.12Glucose-1-phosphate adenylyltransferase OS=Thermos... [more]
GLMU_CLOD62.156e-1327.96Bifunctional protein glmU OS=Clostridium difficile... [more]
GLGC_BACCR2.816e-1327.17Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACAH2.816e-1327.17Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
RMLA_STRMU4.803e-1323.74Glucose-1-phosphate thymidylyltransferase OS=Strep... [more]
Y1334_METJA1.070e-1228.05Putative UTP--glucose-1-phosphate uridylyltransfer... [more]
RMLA_SALAN1.070e-1224.41Glucose-1-phosphate thymidylyltransferase OS=Salmo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010B11_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T7_B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884723 ID=CV884723; Name=CV884723; organism=Citrus sinensis; type=EST; length=920bp
CGAGCGCGCGAGCTCGCCTCATCCGTTGACTGAGCTGTCGGTCCCGAGTC
ACGACTCGCGACTCTTGTTTTTCAACTCAGTTGTTTGCCGTTCGGATCCG
GTCTTAATTAAAGGATAAAGCAGGCTCCGTATCACAATGAAGGCACTTAT
TCTTGTTGGAGGGTTCGGAACACGGTTGAGGCCGTTGACGCTTAGTGTCC
CTAAGCCACTTGTTGAATTTGCTAACAAACCCATGATCCTGCATCAGATA
GAGGCCCTTAAGGCAGTTGGAGTGACTGAAGTAGTTTTGGCTATTAACTA
CCAGCCAGAGGTGATGTTGAACTTTTTGAAGGAATTTGAAGCAAAGCTTG
GGATCAAGATCATCTGCTCACAAGAGACTGAGCCACTGGGCACTGCTGGT
CCTCTGGCTCTGGCTAGAGACAAATTGATTGACGATACTGGTGAGCCATT
TTTCGTCCTTAACAGTGATGTTATTAGTGAGTACCCATTTGCAGAAATGA
TTGAATTCCACAAAGCACATGGAGGAGAGGCCTCCATCATGGTAACCAAG
GTGGATGAGCCATCAAAATATGGTGTGGTGGTTATGGAAGACTCTACTGG
AAAAGTTGAGAAATTCGTAGAGAAACCTAAATTATTTGTTGGTAACAAAA
TTAATGCTGGAATTTATCTTTTGAACCCTGCGGTTCTTGATCGCATTGAG
CTGAGGCCCACCTCCATTGAGAAAGAGGTCTTTCCAAAAATTGCTTTAGA
GGGAAAGCTCTTCGCGATGGTTCTTCCAGGTTTCTGGATGGACATTGGAC
AGCCGAGGGATTACATTACAGGCTTGAGACTCTATCTGGACTCCCTGAGG
AAGAAGTCCTCATTCAAGTTGGCCACTGGTGCTAACATTGTAGGCAATGT
CTTGGTGCATGAGAGTGCTC
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