CV884723
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: RMLA3_ECOLX (Glucose-1-phosphate thymidylyltransferase OS=Escherichia coli GN=rmlA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.398e-12 Identity = 64/255 (25.10%), Postives = 120/255 (47.06%), Query Frame = 2 Query: 134 TMKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLD--RIELRPTS---IEKEVFPKIALE-GKL-FAMVLPGF-WMDIGQPRDYITGLRLYLDSLRKKSSFKLA 874 T K +IL GG GTRL P+T++V K L+ +KPMI + + L G+ ++++ Q L ++ G+ + + P G A + D + D + VL ++ + +++E A++ V++P +YGVV D+ G EKP N G+Y + V++ R L+P++ +E +I +E G+L AM+ G+ W+D G + I ++ ++ ++ K++ Sbjct: 3 TRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEDFIGGD--DCALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYGVVEF-DNNGTAISLEEKPLEPKSNYAVTGLYFYDNDVVEMARKNLKPSARGELEITDINRIYMEQGRLSVAMMGRGYAWLDTGTHQSLIEASN-FIATIEERQGLKVS 253
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_BACLD (Glucose-1-phosphate adenylyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=glgC PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.825e-12 Identity = 68/244 (27.87%), Postives = 112/244 (45.90%), Query Frame = 2 Query: 143 ALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEA------KLGIKII-----CSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAV----LDRIELRPTS---IEKEVFPKIALEGK-LFAMVLPGFWMDIGQPR 808 A++L GG G+RL LT ++ KP V F K I+ + G+ V + YQP ++ +++ E G+ I+ S+ GTA + R L + E +L+ D I + + +M+E+H +A+I V +V E ++G++ D ++ F EKPK N + G+Y+ +V L+R E S K+V P + E K L A G+W D+G R Sbjct: 7 AMLLAGGKGSRLNALTKNLAKPAVPFGGKYRIIDFALSNCANSGIHHVGVLTQYQPLLLNSYIGIGEPWDLDRNDGGVSILSPYAEASEVKWYKGTASAIYENRHFLKELQPEHVLILSGDHIYKMDYGKMLEYHAEKQADATIAVIEVSWAEAGRFGILHTNDKM-EITSFEEKPKYPKSNLASMGVYVFKWSVLEDALERDEKNSASSHDFGKDVIPALLEENKRLNAYPFKGYWKDVGTVR 249
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_EUBE2 (Glucose-1-phosphate adenylyltransferase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=glgC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.384e-12 Identity = 68/246 (27.64%), Postives = 114/246 (46.34%), Query Frame = 2 Query: 137 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQP-----EVMLNFLKEFEAKL-GIKII----CSQETE-PLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASI--MVTKVDEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYL-----LNPAVLDRIELRPTSIEKEVFPKIALEGK-LFAMVLPGFWMDIGQPRDY 814 M A++L GG G+RL LT V KP V F K I+ + G+ V + YQP + + + + + G+ ++ SQ +E GTA + + + E +L+ D I + + M+++HKA+ + +I M ++E S++GVVV D+ K+ +F EKP+ N + GIY+ L A++ + + K V P K +FA G+W D+G Y Sbjct: 6 MIAMLLAGGQGSRLGVLTSKVAKPAVAFGGKYRIIDFPLSNCINSGIDTVGVLTQYQPLRLNTHIGIGIPWDLDRNVGGVSVLPPYEKSQNSEWYTGTANAIYQNLEYMEQYHPEYVLILSGDHIYKMDYKIMLDYHKANNADITIAAMPVPMEEASRFGVVV-TDNDNKITEFEEKPEHPKSNLASMGIYIFSWKVLKDALIKLKDQQECDFGKHVIPYCFNNNKRIFAYEYNGYWKDVGTLSSY 250
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: RMLA_SALTY (Glucose-1-phosphate thymidylyltransferase OS=Salmonella typhimurium GN=rmlA PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.113e-12 Identity = 62/254 (24.41%), Postives = 120/254 (47.24%), Query Frame = 2 Query: 134 TMKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIE-LRPTS---IEKEVFPKIALE-GKL-FAMVLPGF-WMDIGQPRDYITGLRLYLDSLRKKSSFKLA 874 T K +IL GG GTRL P+T++V K L+ +KPMI + + L G+ ++++ Q L ++ G+ + + P G A + + + D + VL ++ + +++E A++ V++P +YGVV D G EKP N G+Y + +V++ + L+P++ +E +I +E G+L AM+ G+ W+D G + I ++ ++ ++ K++ Sbjct: 3 TRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEFIGHD--DCALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYGVVEF-DQKGTAVSLEEKPLQPKSNYAVTGLYFYDNSVVEMAKNLKPSARGELEITDINRIYMEQGRLSVAMMGRGYAWLDTGTHQSLIEASN-FIATIEERQGLKVS 252
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_THEM4 (Glucose-1-phosphate adenylyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glgC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.113e-12 Identity = 60/245 (24.49%), Postives = 109/245 (44.49%), Query Frame = 2 Query: 143 ALILVGGFGTRLRPLTLSVPKPLVEFANK-PMILHQIEALKAVGVTEVVLAINYQPEVM---LNFLKEFEAKL---GIKIICSQETEPLGT----AGPLALARDKLIDDTGEPFFV-LNSDVISEYPFAEMIEFHKAHG--GEASIMVTKVDEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIE-------KEVFPKIALEGKLFAMVLPGFWMDIGQPRDY 814 ALIL GG GTRL LT + KP V+F K +I + G+ ++ + Y+P ++ + K ++ G+ I+ TE +G + + +D + V L+ D I + E++++H A G + M + E +++G++V D ++ +F EKPK + GIY+ + + + E K++ PKI +++A G+W D+G Y Sbjct: 6 ALILAGGQGTRLGVLTEKIAKPAVQFGGKYRLIDFTMSNCVNSGIYKIGVLTQYKPHLLNRHIGIGKPWDLDRKDGGVTILQPYSTEKVGVWYKGTADAVYSNIEFVDSYSPDYVVILSGDHIYSMDYNELVDYHVAKSALGTVACMEVPLSEANRFGIMV-TDLENRIIEFQEKPKFPKSTLASLGIYVFQWNFIREVLMEDAKDENSTHDFGKDIIPKIINTKRVYAFPFEGYWKDVGTIYSY 249
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_THELT (Glucose-1-phosphate adenylyltransferase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.113e-12 Identity = 67/247 (27.13%), Postives = 113/247 (45.75%), Query Frame = 2 Query: 143 ALILVGGFGTRLRPLTLSVPKPLVEFANK-PMILHQIEALKAVGVTEVVLAINYQPEVMLNFLK-----EFEAKLGIKIICSQETEPL-----GTAGPLALARDKLIDDTGEPFFV--LNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEK-------EVFPKIALEG-KLFAMVLPGFWMDIGQPRDY 814 ALIL GG G RL LT + KP V F K +I + G+ V + Y+P ++ N + + + K G I + GTA A+ ++ D+ +P FV L+ D + + ++I+FH G E +I +V +E +++G ++M D ++ F EKP+ N + GIY+ N L +R + ++ P + EG +++A G+W D+G R Y Sbjct: 6 ALILAGGHGKRLGVLTEKIAKPAVPFGGKYRLIDFTLSNCVNSGIYHVGVLTQYRPHLLNNHINIGRPWDLDRKKGGVTILPPYLGGVAGWYRGTAN--AVYQNIEYVDSADPDFVLILSGDHVYAMDYNDIIDFHILKGAEGTIACIEVPPEETNRFG-IMMTDLDSRIVDFEEKPQRARSNLASLGIYVFNWKFLKEYLIRDEQNNESTHDFGHDIIPLMINEGCQIYAFKFNGYWRDVGTVRSY 249
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_BACCL (Glucose-1-phosphate adenylyltransferase (Fragment) OS=Bacillus caldolyticus GN=glgC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.113e-12 Identity = 65/248 (26.21%), Postives = 113/248 (45.56%), Query Frame = 2 Query: 143 ALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNF------------------LKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLN-PAVLDRIEL------RPTSIEKEVFPKIALEGK-LFAMVLPGFWMDIG 799 A++L GG G+RLR LT ++ KP V F K I+ + G+ V + YQP ++ ++ L + A G+K GTA + + + + VL+ D I + + +M+++H A +A+I V +V +E S++G++ ++ VE F EKP N + GIY+ N P + + +++ K+V P++ E K L A G+W D+G Sbjct: 7 AMLLAGGQGSRLRSLTKNIAKPAVPFGGKYRIIDFTLSNCTNSGIDTVGVLTQYQPLLLHSYIGIGSAWDLDRRNGGVTVLPPYSASSGVKWY-------EGTANAIYQNMNYIEQYDPDYVLVLSGDHIYKMDYQQMLDYHIAKQADATISVIEVPWEEASRFGIMNTNENMEIVE-FAEKPANPKSNLASMGIYIFNWPLLREYLQIDNADPHSSHDFGKDVIPRLLRENKRLVAYPFKGYWKDVG 246
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_FUSNN (Glucose-1-phosphate adenylyltransferase OS=Fusobacterium nucleatum subsp. nucleatum GN=glgC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.066e-12 Identity = 68/243 (27.98%), Postives = 109/243 (44.86%), Query Frame = 2 Query: 143 ALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLK-----EFEAKLGIKIICSQETEP-------LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTK---VDEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLN----PAVLDRIELRPTS---IEKEVFPKIALEG-KLFAMVLPGFWMDIG 799 A+IL GG GTRL+ LT + KP V F K I+ + G+ V + Y+P ++ N + + + G + T GTA + + + E +L+ D I + + +M++FH +A+I V K VD PS +G++ +D + +F EKPK + + GIY+ N LD E P S K + P + +G K+FA G+W D+G Sbjct: 10 AMILAGGQGTRLKELTEDLAKPAVAFGGKYRIIDFTLTNCSNSGIDTVGVLTQYEPRILNNHIGRGSPWDLDRMDGGVTVLQPHTRKNDEKGWYKGTANAIYQNIKFIEEYDPEYVLILSGDHIYKMNYDKMLQFHIQKDADATIGVFKVPLVDAPS-FGIMNTKDDM-SIYEFEEKPKEPKSDLASMGIYIFNWKLLKKYLDEDEKDPNSSNDFGKNIIPNMLNDGKKMFAYPFKGYWRDVG 250
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_MYCMO (Glucose-1-phosphate adenylyltransferase OS=Mycoplasma mobile GN=glgC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.311e-12 Identity = 64/246 (26.02%), Postives = 114/246 (46.34%), Query Frame = 2 Query: 137 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKL---------GIKIICSQETEP-----LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAVL----DRIELRPTSIE---KEVFPKIALE-GKLFAMVLPGFWMDIG 799 M A+IL GG GTRL+ LT + KP V F K I+ + G+ V + Y+P L+ LK + + G+ ++ E GTA + D + + +L+ D I + +++M++FHK +I V +E S++G++ ++ VE+F EKPK+ K + G+Y+ N +L + ++ + + + + P I + K+FA G+W D+G Sbjct: 6 MIAMILAGGQGTRLKNLTKKIAKPAVPFGAKYRIIDFTLSNCINSGIDTVGVLTQYRP---LSLLKHIGSGIPFDLNRLNGGVVLLSPYVKESEGYWYAGTAHAIFENIDFMNEYDPTYALILSGDHIYKMDYSKMLDFHKEKNANVTIATINVSFEEASRFGILNTNEN-NMVEEFEEKPKIPKSTKASMGVYIFNYQLLKDTFEELKSKGNNFQDFGHNILPYILKKYSKIFAYEFNGYWKDVG 247
BLAST of CV884723 vs. ExPASy Swiss-Prot
Match: GLGC_CLOBA (Glucose-1-phosphate adenylyltransferase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=glgC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.311e-12 Identity = 67/243 (27.57%), Postives = 114/243 (46.91%), Query Frame = 2 Query: 143 ALILVGGFGTRLRPLTLSVPKPLVEFANKPMIL-HQIEALKAVGVTEVVLAINYQP-----EVMLNFLKEFEAK-LGIKIICSQETEP-----LGTAGPLALARDKLIDDTGEPFFV--LNSDVISEYPFAEMIEFHKAHGGEASIMVTK--VDEPSKYGVVVMEDSTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI-------ELRPTSIEKEVFPKIALE-GKLFAMVLPGFWMDIG 799 A+IL GG G+RL LT + KP V F K I+ + G+ V + Y+P + + + + K G+ I+ + E GTA A+ ++ D +P +V L+ D I + + +M+EFHK +A+I V + V+E S++G++ D + +F EKPK+ N + GIY+ N L + + K++ P + + GK+ A G+W D+G Sbjct: 8 AMILAGGQGSRLGVLTKKLAKPAVPFGGKYRIIDFPLSNCANSGIYTVGVLTQYKPLELNAHIGIGLPWDLDRKDGGVSILPPYQEEKGGNWYKGTAN--AIYQNIEFVDRYDPEYVLILSGDHIYKMNYTKMLEFHKEKNADATIGVIEVPVNEASRFGIMNTRDDM-SIYEFEEKPKIPKSNLASMGIYIFNWKTLKKYLRNDEANKSSSNDFGKDIIPSMLNDGGKMVAYPFEGYWKDVG 247 The following BLAST results are available for this feature:
BLAST of CV884723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884723 ID=CV884723; Name=CV884723; organism=Citrus sinensis; type=EST; length=920bpback to top |