CV884722

Overview
NameCV884722
Unique NameCV884722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPAA_DANRE (Mannose-1-phosphate guanyltransferase alpha-A OS=Danio rerio GN=gmppaa PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.585e-22
Identity = 60/188 (31.91%), Postives = 95/188 (50.53%), Query Frame = -3
Query:  316 GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVE----------------------------NMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 783
            GKL+      FW  I      I   RLYL+   K    +LAT    GA   GNV +H +A I    ++GP+V++G G  + +GVR+    ++ G  ++ H+C+ +SI+GW ST+G+WARVE                            ++TILG +V++  E+     +VLPHK++  S  K +I++
Sbjct:  236 GKLYVYKTDRFWSQIKSAGSAIYASRLYLNQYHKTHPERLATNTEGGAKTRGNVYIHPTANIDPTAVLGPNVSIGTGVTIGAGVRVRESIILHGATLQDHSCVLNSIVGWESTIGKWARVEGTPSDPNPNDPYAKIDSETLFRDGKLTPSITILGCNVNIPSEVIILNSIVLPHKDLNRS-FKNQIIL 422          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPPA_XENTR (Mannose-1-phosphate guanyltransferase alpha OS=Xenopus tropicalis GN=gmppa PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.419e-20
Identity = 60/188 (31.91%), Postives = 92/188 (48.94%), Query Frame = -3
Query:  316 GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVE----------------------------NMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 783
            GKL+     G W  I      I   RLYL         +LA+    G  I GNV +H +A +    ++GP+V++G G  V +GVR+    V+ G  ++ H+C+ ++I+GW STVG+WARVE                            ++TILG +V +  E+     +VLPHKE+  S  K +I++
Sbjct:  235 GKLYVYKTEGCWSQIKSAGSAIYASRLYLSQYGSTHPERLASTKEGGPTIRGNVYIHPTANVDPSAVLGPNVSIGMGVTVGAGVRIRESIVLHGAVLQDHSCVLNTIVGWDSTVGRWARVEGTPSDPNPNDPYSKIDSETLFREGKLTPSITILGCNVSIPAEVVILNSIVLPHKELSRS-FKNQIIL 421          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPAB_DANRE (Mannose-1-phosphate guanyltransferase alpha-B OS=Danio rerio GN=gmppab PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.853e-20
Identity = 58/187 (31.02%), Postives = 90/187 (48.13%), Query Frame = -3
Query:  316 KLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGAN----IVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVE----------------------------NMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 780
            KLF      FW  I      I   RLYL    +    +LAT       I G+V +H +A I    ++GP+V++G G  +  GVR+    ++ G  ++ H C+ +SI+GW STVG+WARVE                            ++TILG +V++  E+     +VLPHK++  S  K +I++
Sbjct:  237 KLFVYKTQHFWSQIKSAGSAIYASRLYLKQYHQTHPERLATNQGGTPKITGDVYIHPTANIDPSAVLGPNVSIGKGVTIGGGVRVRESIILHGAVLQDHCCVLNSIVGWDSTVGKWARVEGTPSDPNPNDPYAKIDSETLFRDGGLTPSITILGCNVNIPSEVIIRNSIVLPHKDLNRS-FKNQIIL 422          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPPA_PAPAN (Mannose-1-phosphate guanyltransferase alpha OS=Papio anubis GN=GMPPA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.160e-20
Identity = 57/180 (31.67%), Postives = 85/180 (47.22%), Query Frame = -3
Query:  340 GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVEN----------------------------MTILGEDVHVCDEIYSNGGVVLPHKEIKSS 783
            G+++  +  G W  I      +   RLYL   +     +LA     G  I GNV +H +A++    ++GP+V++G G  V  GVRL    V+ G  +++H C+  SI+GW STVG+WARVE                             +TILG  V +  E+     +VLPHKE+  S
Sbjct:  234 GQIYVHLTDGIWSQIKSAGSALYASRLYLSRYQDTHPERLAKHTPGGPRIRGNVYIHPTAKVAPSAVLGPNVSIGKGVTVGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPNDPNPNDPRARMDSESLFKDGKLLPAITILGCRVRIPAEVLILNSIVLPHKELSRS 413          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPPA_DICDI (Mannose-1-phosphate guanyltransferase alpha OS=Dictyostelium discoideum GN=gmppA PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.128e-20
Identity = 56/163 (34.36%), Postives = 77/163 (47.24%), Query Frame = -3
Query:  349 GKLFAMVLP--GFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVE----------------NMTILGEDVHVCDEIYSNGGVVLPHKEI 783
            G  F  V P  GFW  I      +    LYL+   K     L  G NI+GNV++  +A +    +IGPDV +GP   +  GVR+    ++    IK HACI  SIIGW S +G WAR+E                 +TI G       EI  +  +V+PHK++
Sbjct:  240 GTGFISVYPYVGFWRQIKNAGSSVYCQELYLNHFAKTKPEVLKKGNNIIGNVIIDSTASVDPSAIIGPDVYIGPNVKIGKGVRVIHSIILDQTEIKDHACIIYSIIGWQSLIGVWARIEGIPNYTPFLYSQDKRRGVTIFGAGAQANGEIIVSNCIVMPHKQL 402          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPAB_XENLA (Mannose-1-phosphate guanyltransferase alpha-B OS=Xenopus laevis GN=gmppa-B PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.041e-20
Identity = 59/188 (31.38%), Postives = 91/188 (48.40%), Query Frame = -3
Query:  316 GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVE----------------------------NMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 783
            GKL+     G W  I      I   RLYL         +LA+    G  I GNV +H +A +    ++GP+V+VG G  V +GVR+    ++ G  ++ H+C+ ++I+GW S VG+WARVE                            ++TILG +V +  E+     +VLPHKE+  S  K +I++
Sbjct:  240 GKLYVYKTEGCWSQIKSAGSAIYASRLYLSQYSTTHPERLASTKEGGPTIRGNVYIHPTANVDPSAVLGPNVSVGMGVTVGAGVRIRESIILHGAVLQDHSCVLNTIVGWDSMVGRWARVEGTPSDPNPNDPYSKIDSETLFREGKLTPSITILGCNVSIPAEVVILNSIVLPHKELSRS-FKNQIIL 426          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPPA_RAT (Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.195e-20
Identity = 56/180 (31.11%), Postives = 85/180 (47.22%), Query Frame = -3
Query:  340 GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVEN----------------------------MTILGEDVHVCDEIYSNGGVVLPHKEIKSS 783
            G+++  +  G W  I      +   RLYL   +     +LA     G  I GNV +H +A++    ++GP+V++G G  +  GVRL    V+ G  +++H C+  SI+GW STVG+WARVE                             +TILG  V +  E+     +VLPHKE+  S
Sbjct:  234 GQIYVHLTDGIWSQIKSAGSALYASRLYLGRYQITHPERLARHTAGGPRIRGNVYIHPTAKVAPSAVLGPNVSIGKGVTIGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPNDPNPNDPRARMDSESLFKDGKLLPAITILGCRVRIPAEVLILNSIVLPHKELSRS 413          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPPA_MOUSE (Mannose-1-phosphate guanyltransferase alpha OS=Mus musculus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.195e-20
Identity = 56/180 (31.11%), Postives = 85/180 (47.22%), Query Frame = -3
Query:  340 GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVEN----------------------------MTILGEDVHVCDEIYSNGGVVLPHKEIKSS 783
            G+++  +  G W  I      +   RLYL   +     +LA     G  I GNV +H +A++    ++GP+V++G G  +  GVRL    V+ G  +++H C+  SI+GW STVG+WARVE                             +TILG  V +  E+     +VLPHKE+  S
Sbjct:  234 GQIYVHLTDGIWSQIKSAGSALYASRLYLGRYQITHPERLARHTPGGPRIRGNVYIHPTAKVAPSAVLGPNVSIGKGVTIGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPNDPNPNDPRARMDSESLFKDGKLLPAITILGCRVRIPAEVLILNSIVLPHKELSRS 413          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPPA_HUMAN (Mannose-1-phosphate guanyltransferase alpha OS=Homo sapiens GN=GMPPA PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.195e-20
Identity = 57/180 (31.67%), Postives = 85/180 (47.22%), Query Frame = -3
Query:  340 GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVEN----------------------------MTILGEDVHVCDEIYSNGGVVLPHKEIKSS 783
            G+++  +  G W  I      +   RLYL   +     +LA     G  I GNV +H +A++    ++GP+V++G G  V  GVRL    V+ G  +++H C+  SI+GW STVG+WARVE                             +TILG  V +  E+     +VLPHKE+  S
Sbjct:  234 GQIYVHLTDGIWSQIKSAGSALYASRLYLSRYQDTHPERLAKHTPGGPWIRGNVYIHPTAKVAPSAVLGPNVSIGKGVTVGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPSDPNPNDPRARMDSESLFKDGKLLPAITILGCRVRIPAEVLILNSIVLPHKELSRS 413          
BLAST of CV884722 vs. ExPASy Swiss-Prot
Match: GMPAA_XENLA (Mannose-1-phosphate guanyltransferase alpha-A OS=Xenopus laevis GN=gmppa-A PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.195e-20
Identity = 58/188 (30.85%), Postives = 91/188 (48.40%), Query Frame = -3
Query:  316 GKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLAT----GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVE----------------------------NMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 783
            GKL+     G W  I      I   RLYL         +LA+    G  I GNV +H +A +    ++GP+V++G G  V +GVR+    ++ G  ++ H+C+ ++I+GW S VG+WARVE                            ++TILG +V +  E+     +VLPHKE+  S  K +I++
Sbjct:  235 GKLYVYKTEGCWSQIKSAGSAIYASRLYLSQYGTTHPERLASTKEGGPTIRGNVYIHPTANVDPSAVLGPNVSIGMGVTVAAGVRIRESIILHGAVLQDHSCVLNTIVGWDSMVGRWARVEGTPSDPNPNDPYSKIDSETLFRDGKLTPSITILGCNVSIPAEVVILNSIVLPHKELSRS-FKNQIIL 421          
The following BLAST results are available for this feature:
BLAST of CV884722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
GMPAA_DANRE2.585e-2231.91Mannose-1-phosphate guanyltransferase alpha-A OS=D... [more]
GMPPA_XENTR1.419e-2031.91Mannose-1-phosphate guanyltransferase alpha OS=Xen... [more]
GMPAB_DANRE1.853e-2031.02Mannose-1-phosphate guanyltransferase alpha-B OS=D... [more]
GMPPA_PAPAN3.160e-2031.67Mannose-1-phosphate guanyltransferase alpha OS=Pap... [more]
GMPPA_DICDI4.128e-2034.36Mannose-1-phosphate guanyltransferase alpha OS=Dic... [more]
GMPAB_XENLA7.041e-2031.38Mannose-1-phosphate guanyltransferase alpha-B OS=X... [more]
GMPPA_RAT9.195e-2031.11Mannose-1-phosphate guanyltransferase alpha OS=Rat... [more]
GMPPA_MOUSE9.195e-2031.11Mannose-1-phosphate guanyltransferase alpha OS=Mus... [more]
GMPPA_HUMAN9.195e-2031.67Mannose-1-phosphate guanyltransferase alpha OS=Hom... [more]
GMPAA_XENLA9.195e-2030.85Mannose-1-phosphate guanyltransferase alpha-A OS=X... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010B11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884722 ID=CV884722; Name=CV884722; organism=Citrus sinensis; type=EST; length=785bp
AATAAATGCATTTATACGAACATCATTGACAATTACTGACACAGAAACCA
ACCTGATGGTTTATTGCCATATCTTTATCTACACTAAAGTTACAATTTCA
CTTCCCACACCAATGATAATTTTGAGCATTTTACAAGAGAAACTAAAAAA
GCCTTCAACTTTAGAACTCACACAACTCAAAAGACTAAAACACACGGAGT
TTTACAATTGTAAAGAAGATGAAGAAGGGATAAAGAACACATTACCGGGC
ACAATGACTGGATAACTTGCTACTCTCCGACCACATTCTCTACTTGCAAT
CTGATCAGTGGCTCACATGACTATCTCTGGCTTCAAAATGCTTGATTTTA
TCTCTTTGTGCGGCAAAACCACACCCCCATTGCTATAAATTTCATCGCAG
ACATGAACGTCTTCCCCGAGAATGGTCATGTTCTCTACACGAGCCCATTG
CCCAACAGTGGAGTGCCATCCAATGATACTGCTGGATATGCAAGCATGTT
TCTTGATGCGCACTCCACGCATCACTGTGCAGCGAGAGAGTCTAACTCCT
GACTCAACAACACAACCCGGGCCAACGGCAACATCGGGTCCAATCAAACA
TCCCTCCCCAATTTGAGCACTCTCATGCACCAAGACATTGCCTACAATGT
TAGCACCAGTGGCCAACTTGAATGAGGACTTCTTCCTCAGGGAGTCCAGA
TAGAGTCTCAAGCCTGTAATGTAATCCCTCGGCTGTCCAATGTCCATCCA
GAAACCTGGAAGAACCATCGCGAAGAGCTTTCCCT
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