CV884712
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA12_ORYSJ (Cyclin-A1-2 OS=Oryza sativa subsp. japonica GN=CYCA1-2 PE=3 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 1.037e-34 Identity = 78/148 (52.70%), Postives = 95/148 (64.19%), Query Frame = -2 Query: 500 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIPGCYFED 943 EA +L LKFE+ +PT K FLRR RVAQ L LEFL Y+AELSLL+Y + + PS VAAS IFLA+FI QP+KHPW ++L Y+ YK SE+ CV LH L+ G NL A+REKY QHK K VA P +P +F D Sbjct: 328 EASVLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLAKFILQPTKHPWNSTLAHYTQYKSSELSDCVKALHRLFSVGPGSNLPAIREKYTQHK-KFVAKKHCPPSVPSEFFRD 474
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA11_ARATH (Cyclin-A1-1 OS=Arabidopsis thaliana GN=CYCA1-1 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.954e-31 Identity = 70/148 (47.30%), Postives = 92/148 (62.16%), Query Frame = -2 Query: 500 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIPGCYFED 943 E+D+L LKFE+ +PT K FLRR R A + A +QLE + Y+AELSLL+Y + PS VAAS IFLA++I P++ PW ++LQ Y+ YK E+ GCV L L + G L AVREKY QHK+K VA IP +F + Sbjct: 312 ESDVLNYLKFEMTAPTTKCFLRRFVRAAHGVHEAPLMQLECMANYIAELSLLEYTMLSHSPSLVAASAIFLAKYILDPTRRPWNSTLQHYTQYKAMELRGCVKDLQRLCSTAHGSTLPAVREKYSQHKYKFVAKKFCPSVIPQEFFNN 459
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCF32_ORYSJ (Putative cyclin-F3-2 OS=Oryza sativa subsp. japonica GN=CYCF3-2 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 9.082e-31 Identity = 68/150 (45.33%), Postives = 95/150 (63.33%), Query Frame = -2 Query: 494 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIPGCYFEDIK 943 EA+IL L F++GSPTV TFLRR + N++LE + YLAELSLLD ++FLPS VAA+ +F+ +F P+ PW S+QR +GYK S+IE C+ +HDL R+ NL+A+R KY+ F+ V+T PS I + D+K Sbjct: 253 EANILSFLNFQMGSPTVITFLRRFLFSCRGSNRPINIRLELMCIYLAELSLLDDYNIRFLPSIVAAACLFVGKFTLNPNTRPWNLSVQRITGYKVSDIEDCIRSIHDLQAGRKWSNLRAIRSKYEDDAFERVSTIPSPNTIKPSFLRDLK 402
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA24_ARATH (Cyclin-A2-4 OS=Arabidopsis thaliana GN=CYCA2-4 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.549e-30 Identity = 67/146 (45.89%), Postives = 96/146 (65.75%), Query Frame = -2 Query: 506 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIPGCYF 943 E+ +LK F++ +PT KTFLRR R AQ + +L++EFL YL EL+L+DY +KFLPS +AAS +FLA++ S HPW +L+ Y+ YK S+++ V L DL L+ +G +L ++R KY+Q KFK VA SS E+P F Sbjct: 315 ESQVLKHFSFQIYTPTSKTFLRRFLRAAQVSFPNQSLEMEFLANYLTELTLMDYPFLKFLPSIIAASAVFLAKWTLNQSSHPWNPTLEHYTTYKASDLKASVHALQDLQLNTKGCSLNSIRMKYRQDKFKSVAVF-SSGELPDKLF 459
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA22_ARATH (Cyclin-A2-2 OS=Arabidopsis thaliana GN=CYCA2-2 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.816e-29 Identity = 64/145 (44.14%), Postives = 89/145 (61.38%), Query Frame = -2 Query: 509 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIPGCY 943 E IL + F L PT KTFLRR + AQ Y ++LE+L YLAEL+L++Y+ ++FLPS +AAS +FLAR+ + HPW +LQ Y+ Y+ +E++ VL + DL L+ G L A REKY Q KFK VA S + + Sbjct: 290 EIQILNFVHFRLSVPTTKTFLRRFIKAAQASYKVPFIELEYLANYLAELTLVEYSFLRFLPSLIAASAVFLARWTLDQTDHPWNPTLQHYTRYEVAELKNTVLAMEDLQLNTSGCTLAATREKYNQPKFKSVAKLTSPKRVTSLF 434
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA21_ORYSJ (Cyclin-A2-1 OS=Oryza sativa subsp. japonica GN=CYCA2-1 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.816e-29 Identity = 67/141 (47.52%), Postives = 90/141 (63.83%), Query Frame = -2 Query: 521 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEI 943 E +L + F L PT KTFLRR R AQ N ++ L +L YLAEL+L+DY+ +KFLPS VAAS +FLAR+ S PW +L+ Y+ YK S+I+ CV L +L + L A+REKY+Q KF+CVA +SPE+ Sbjct: 345 EGLVLNDMGFHLSVPTTKTFLRRFLRAAQASRNVPSITLGYLANYLAELTLIDYSFLKFLPSVVAASAVFLARWTLDQSDIPWNHTLEHYTSYKSSDIQICVCALRELQHNTSNCPLNAIREKYRQQKFECVANL-TSPEL 484
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA23_ARATH (Cyclin-A2-3 OS=Arabidopsis thaliana GN=CYCA2-3 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 6.508e-29 Identity = 64/137 (46.72%), Postives = 89/137 (64.96%), Query Frame = -2 Query: 533 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPS 943 E +LK F++ +PT KTFLRR R AQ + +L++EFL YL EL+L+DY +KFLPS VAAS +FLA++ S HPW +L+ Y+ YK S+++ V L DL L+ +G L A+R KY+Q K+K VA S Sbjct: 306 ENQVLKHFSFQIYTPTPKTFLRRFLRAAQASRLSPSLEVEFLASYLTELTLIDYHFLKFLPSVVAASAVFLAKWTMDQSNHPWNPTLEHYTTYKASDLKASVHALQDLQLNTKGCPLSAIRMKYRQEKYKSVAVLTS 442
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA21_ARATH (Cyclin-A2-1 OS=Arabidopsis thaliana GN=CYCA2-1 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 9.398e-28 Identity = 64/140 (45.71%), Postives = 86/140 (61.43%), Query Frame = -2 Query: 524 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPE 943 E +L SL F L PT KTFLRR R AQ +++E+L Y AEL+L +Y ++FLPS +AAS +FLAR+ S HPW +LQ Y+ Y+ S ++ VL + +L L+ G L A+ KY Q KFK VAT +SPE Sbjct: 298 EIKVLNSLHFRLSVPTTKTFLRRFIRAAQASDKVPLIEMEYLANYFAELTLTEYTFLRFLPSLIAASAVFLARWTLDQSNHPWNQTLQHYTRYETSALKNTVLAMEELQLNTSGSTLIAIHTKYNQQKFKRVATL-TSPE 436
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCA12_ARATH (Cyclin-A1-2 OS=Arabidopsis thaliana GN=CYCA1-2 PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 6.092e-27 Identity = 62/142 (43.66%), Postives = 85/142 (59.86%), Query Frame = -2 Query: 518 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTPSSPEIP 943 E+ +L LKFEL +PT K FLRR R AQ +L E L YL ELSLLDYA +++ PS VAAS +FLA++ PS+ PW A+L+ Y+ Y+ +E CV L L + ++ A+R+KY QHK+K A +P Sbjct: 296 ESSVLNYLKFELTTPTAKCFLRRFLRAAQGRKEVPSLLSECLACYLTELSLLDYAMLRYAPSLVAASAVFLAQYTLHPSRKPWNATLEHYTSYRAKHMEACVKNLLQLCNEKLSSDVVAIRKKYSQHKYKFAAKKLCPTSLP 437
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCNA_CHLVR (G2/mitotic-specific cyclin-A (Fragment) OS=Chlorohydra viridissima PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.408e-15 Identity = 50/132 (37.88%), Postives = 78/132 (59.09%), Query Frame = -2 Query: 542 ILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDY-ACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVAT 934 ILK+L F+L PT + FL R A + QL++L YL+EL+L++ VK+ PS +AAS I +A + + PWT +L+ YSGY ++ C+ +H L+L+ QA+++KYK KF CV++ Sbjct: 285 ILKTLAFDLSVPTCRDFLSRYLFAANAKPES---QLKYLAEYLSELTLINCDISVKYAPSMIAASSICVANHML--NSIPWTPTLEFYSGYNIQDLRSCLNEIHLLHLAASTNPQQAIQQKYKSPKFGCVSS 411 The following BLAST results are available for this feature:
BLAST of CV884712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884712 ID=CV884712; Name=CV884712; organism=Citrus sinensis; type=EST; length=944bpback to top |