CV884712
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCNB_DICDI (G2/mitotic-specific cyclin-B OS=Dictyostelium discoideum GN=cycB PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.838e-15 Identity = 50/136 (36.76%), Postives = 74/136 (54.41%), Query Frame = -2 Query: 536 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTP 943 E IL +L+F + T FLRR ++ A D +L YL+ELS+++Y V+F+PS +AA+ I++AR +T S W +L+ Y+ YK SEI C L ++ NL+A R+KY K VA P Sbjct: 302 ERQILSTLQFHMSVATPLHFLRRFSKAAGSDSRTHSLSK-----YLSELSMVEYRMVQFVPSMIAAASIYVARRMTMKSGPYWNVTLEYYTCYKESEILQCAQELKEVRKRADTSNLKATRKKYLSSKLMEVAAIP 432
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCF31_ORYSJ (Putative cyclin-F3-1 OS=Oryza sativa subsp. japonica GN=CYCF3-1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.401e-15 Identity = 46/102 (45.10%), Postives = 63/102 (61.76%), Query Frame = -2 Query: 638 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCV 943 E DIL+ L F++GSPTV TFLR+ N+SN +LE + YLAELSLLD ++FLPS VAA+ +F+ +F P+ PW S+ + P I+G V Sbjct: 235 ELDILRFLNFDVGSPTVITFLRKFLTSCCGGNNSSNRKLELMCNYLAELSLLDDYYIRFLPSIVAAACLFVGKFTLNPNTRPWFGSVSTIT--PPENIKGGV 334
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCB31_ARATH (Putative cyclin-B3-1 OS=Arabidopsis thaliana GN=CYCB3-1 PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.317e-13 Identity = 45/124 (36.29%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 572 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKY 943 E +LK LKF L +PT F+ R + AQ SN +LE L +YL EL L++Y +K+ PS + AS I++AR T WT+ L ++ Y S+++ C ++ + + + GNL+ EKY Sbjct: 260 ERSMLKQLKFRLNAPTPYVFMLRFLKAAQ-----SNKKLEQLAFYLIELCLVEYEALKYKPSLLCASAIYVAR-CTLHMTPVWTSLLNNHTHYNVSQMKDCSDMILRFHKAAKTGNLRVTYEKY 377
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCNA1_HUMAN (Cyclin-A1 OS=Homo sapiens GN=CCNA1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.721e-13 Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = -2 Query: 545 ILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDY-ACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVA 934 +LK L F+L PT FL + R ++ E L Y+AELSLL+ +K+LPS +AA+ LA + +KH W +L ++GY SEI C+ LH YL QA+REKYK K+ CV+ Sbjct: 331 LLKVLAFDLTVPTTNQFLLQYLR-----RQGVCVRTENLAKYVAELSLLEADPFLKYLPSLIAAAAFCLANYTV--NKHFWPETLAAFTGYSLSEIVPCLSELHKAYLDIPHRPQQAIREKYKASKYLCVS 454
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCB21_ORYSJ (Cyclin-B2-1 OS=Oryza sativa subsp. japonica GN=CYCB2-1 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.247e-13 Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = -2 Query: 539 ILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATT 934 IL +L+F + PT F+RR + AQ D QL+ L +++ ELSL++Y +K+ PS +AA+ ++ A+ + WT + + +S Y ++ C ++ D + G L V KY KF C A T Sbjct: 274 ILNTLQFNMSVPTPYVFMRRFLKAAQSDK-----QLQLLSFFILELSLVEYQMLKYRPSLLAAAAVYTAQCALTRCQQ-WTKTCELHSRYTGEQLLECSRMMVDFHQKAGAGKLTGVHRKYSTFKFGCAAKT 399
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCB21_ORYSI (Cyclin-B2-1 OS=Oryza sativa subsp. indica GN=CYCB2-1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.247e-13 Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = -2 Query: 539 ILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATT 934 IL +L+F + PT F+RR + AQ D QL+ L +++ ELSL++Y +K+ PS +AA+ ++ A+ + WT + + +S Y ++ C ++ D + G L V KY KF C A T Sbjct: 274 ILNTLQFNMSVPTPYVFMRRFLKAAQSDK-----QLQLLSFFILELSLVEYQMLKYRPSLLAAAAVYTAQCALTRCQQ-WTKTCELHSRYTGEQLLECSRMMVDFHQKAGAGKLTGVHRKYSTFKFGCAAKT 399
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCNA_PATVU (G2/mitotic-specific cyclin-A OS=Patella vulgata PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.935e-13 Identity = 51/138 (36.96%), Postives = 80/138 (57.97%), Query Frame = -2 Query: 530 ILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDY-ACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVA--TTPSS 934 ILK L F++ PT+ F ++A D +L + YL+EL+L+D +K+LPS++AA+ + LA IT S+ PW +SL + S Y+ SE C+ ++ YL+ QA+REKYK K++ V+ + PSS Sbjct: 291 ILKVLSFDVAQPTINWFTDTYAKMADTDETTKSLSM-----YLSELTLVDADPYLKYLPSTIAAASLCLAN-ITLGSE-PWPSSLAKESKYEISEFSECLQEMYQTYLNAPNHPQQAIREKYKSSKYQQVSSISPPSS 421
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCNA2_CHICK (Cyclin-A2 OS=Gallus gallus GN=CCNA2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.539e-13 Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = -2 Query: 545 ILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDY-ACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVA 934 ILK L F+L +PT+ FL + Q +N ++E L YL EL+L+D +K+LPS +AA+ LA + + W SL + +GY I+ C++ LH YL Q++REKYK K+ V+ Sbjct: 262 ILKVLSFDLAAPTINQFLTQYFLHQQ-----TNAKVESLSMYLGELTLIDADPYLKYLPSVIAAAAFHLASYTI--TGQTWPESLCKVTGYTLEHIKPCLMDLHRTYLKAAQHTQQSIREKYKSTKYHAVS 385
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCNB_HYDAT (G2/mitotic-specific cyclin-B (Fragment) OS=Hydra attenuata PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.485e-12 Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = -2 Query: 536 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVATTP 943 E +LK+ +++ +P FLRR ++ D Q L YL EL+L++Y + LPS +AA+ ++LA + S WT +L YSGY EI V L L LS QAV+ KY KF ++ P Sbjct: 219 EQKMLKTCEYDFSNPLCLHFLRRNSKAGAVD-----AQKHTLAKYLMELTLVEYEFITKLPSEIAAAALYLALKLIDDSN--WTPTLAHYSGYTEDEILSTVSKLSILTLSMDNSKYQAVKNKYSASKFLRISLIP 347
BLAST of CV884712 vs. ExPASy Swiss-Prot
Match: CCNB1_MEDVA (G2/mitotic-specific cyclin-1 OS=Medicago varia PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.238e-12 Identity = 41/133 (30.83%), Postives = 68/133 (51.13%), Query Frame = -2 Query: 545 EADILKSLKFELGSPTVKTFLRRLTRVAQEDYNASNLQLEFLGYYLAELSLLDYACVKFLPSSVAASVIFLARFITQPSKHPWTASLQRYSGYKPSEIEGCVLVLHDLYLSRRGGNLQAVREKYKQHKFKCVA 943 E ++ +LKF + PT F+RR + AQ D +LE L ++L ELSL++YA +KF PS +AA+ ++ A+ T W+ + + ++ Y ++ C ++ D + G L KY KF A Sbjct: 289 EKVMVNALKFNISVPTAYVFMRRFLKAAQADR-----KLELLAFFLIELSLVEYAMLKFSPSQLAAAAVYTAQ-CTMYGVKQWSKTCEWHTNYSEDQLLECSSLMVDFHKKAGTGKLTGAHRKYCTSKFSYTA 415 The following BLAST results are available for this feature:
BLAST of CV884712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884712 ID=CV884712; Name=CV884712; organism=Citrus sinensis; type=EST; length=944bpback to top |