CV884711
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: APOB_RAT (Apolipoprotein B-100 OS=Rattus norvegicus GN=Apob PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.933e-12 Identity = 38/110 (34.55%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 430 VQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTV 759 VQK +S +R +L+ WLVEVA S L+LT+ + R+L ++ R KLQLLG++ M+I + + + + +TDNTY ++V+++ +I+ +L+ ++ PTV Sbjct: 4580 VQKGLSDTVRYILIGWLVEVAPMKDFTSLCLHLTVECVGRYLQRKLVPRYKLQLLGIACMVICTWFISKEILTIREAVRLTDNTYKYKDLVRVKREIISALEGKIRIPTV 4689
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CG11_CANAL (G1/S-specific cyclin CLN1 OS=Candida albicans GN=CLN1 PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.298e-12 Identity = 37/117 (31.62%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 430 VQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISP--PNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLR 774 +Q ++ MR L+D+L+E+ +KL TL+L ++ IDR+ + ++ ++ QL+G +++ IASKYE+ P +++ + N Y ++ V+ME IL +L + +G PT++ L+ Sbjct: 69 LQPEIQWFMRPFLLDFLIELHSSFKLQPTTLFLCLNIIDRYCAKRIVFKRHYQLVGCTALWIASKYEDKKSRVPTLKELTIMCRNAYDEEMFVQMEMHILSTLDWSIGHPTLEDCLQ 185
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCB12_ORYSJ (Cyclin-B1-2 OS=Oryza sativa subsp. japonica GN=CYCB1-2 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11 Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 1 Query: 553 LSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVA 792 LS+ + R++LQL+ VS+MLI KYEEI P V DF +I+D+ YT+++++ ME IL L++ L PT F+ L+ A Sbjct: 144 LSMQQVQRRELQLVAVSAMLIDCKYEEIWAPEVNDFIFISDSAYTREQILAMEKGILNKLQWNLTIPTPYVFIMMLSASA 223
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: YL268_MIMIV (Putative serine/threonine-protein kinase L268 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L268 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.637e-11 Identity = 37/107 (34.58%), Postives = 65/107 (60.75%), Query Frame = 1 Query: 442 VSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLS-LNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTV 759 ++ +MR +L+DWL+EV EY+ + DTL L I +D F+ ++ ++R+ Q +G+ M IA+K E E+ +I+ + YT D ++ E +IL++L F L T+ Sbjct: 10 ITLDMRLILIDWLIEVHYEYECIIDTLCLAIILVDEFVDRIDKIDRKYFQCIGICCMNIATKILEPEHIGSENCNFISASQYTTDVIISYEKNILQTLDFHLVRKTI 116 The following BLAST results are available for this feature:
BLAST of CV884711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884711 ID=CV884711; Name=CV884711; organism=Citrus sinensis; type=EST; length=801bpback to top |