CV884711

Overview
NameCV884711
Unique NameCV884711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB2_ORYLA (G2/mitotic-specific cyclin-B2 OS=Oryzias latipes GN=ccnb2 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.571e-38
Identity = 81/166 (48.80%), Postives = 118/166 (71.08%), Query Frame = 1
Query:  307 DIDAR-SDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            D+D + +D PQ+C  YV DIY+YLH +E     R   +Y++  +  V+  MR +LVDWLV+V   ++L+ +TLYLT++ +DRFL ++ ++R+KLQL+GV++ML+A KYEE+  P V DF YITDN +TK ++V+ME  IL+SL F+LG P    FLRR T+VA  D
Sbjct:  109 DVDEQDADQPQLCSQYVKDIYKYLHILEEQQPVRA--NYMQGYE--VTERMRALLVDWLVQVHSRFQLLQETLYLTVAILDRFLQVHPVSRRKLQLVGVTAMLVACKYEEMYAPEVGDFAYITDNAFTKSQIVEMEQVILRSLSFQLGRPLPLHFLRRATKVAGAD 270          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB2_MACFA (G2/mitotic-specific cyclin-B2 OS=Macaca fascicularis GN=CCNB2 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.795e-38
Identity = 77/166 (46.39%), Postives = 116/166 (69.88%), Query Frame = 1
Query:  307 DIDARS-DDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            DID    ++PQ+C  YV DIYQYL  +EV     P   +++   +D++  MR +LVDWLV+V  +++L+ +TLY+ ++ +DRFL +  ++R+KLQL+G++++L+ASKYEE+  PN+EDF YITDN YT  ++ +ME  ILK LKFELG P    FLRR ++  + D
Sbjct:  119 DIDNEDWENPQLCSDYVKDIYQYLRQLEVLQSINP--HFLDG--RDINGRMRAILVDWLVQVHSKFRLLQETLYMCVAIMDRFLQVQPVSRKKLQLVGITALLLASKYEEMFSPNIEDFVYITDNAYTSSQIREMETLILKELKFELGRPLPLHFLRRASKAGEVD 280          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB2_HUMAN (G2/mitotic-specific cyclin-B2 OS=Homo sapiens GN=CCNB2 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.018e-37
Identity = 77/166 (46.39%), Postives = 115/166 (69.28%), Query Frame = 1
Query:  307 DIDARS-DDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            DID    ++PQ+C  YV DIYQYL  +EV     P   +++   +D++  MR +LVDWLV+V  +++L+ +TLY+ +  +DRFL +  ++R+KLQL+G++++L+ASKYEE+  PN+EDF YITDN YT  ++ +ME  ILK LKFELG P    FLRR ++  + D
Sbjct:  119 DIDNEDWENPQLCSDYVKDIYQYLRQLEVLQSINP--HFLDG--RDINGRMRAILVDWLVQVHSKFRLLQETLYMCVGIMDRFLQVQPVSRKKLQLVGITALLLASKYEEMFSPNIEDFVYITDNAYTSSQIREMETLILKELKFELGRPLPLHFLRRASKAGEVD 280          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB2_BOVIN (G2/mitotic-specific cyclin-B2 OS=Bos taurus GN=CCNB2 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.018e-37
Identity = 76/166 (45.78%), Postives = 116/166 (69.88%), Query Frame = 1
Query:  307 DIDARS-DDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            DID    ++PQ+C  YV DIYQYL  +EV     P   +++   +D++  MR +LVDWLV+V  +++L+ +TLY+ ++ +DR+L +  ++R+KLQL+G++++L+ASKYEE+  PN+EDF YITDN YT  ++ +ME  ILK LKFELG P    FLRR ++  + D
Sbjct:  119 DIDTEDWENPQLCSDYVKDIYQYLRQLEVLQSINP--HFLDG--RDINGRMRAILVDWLVQVHSKFRLLQETLYMCVAVMDRYLQVQPVSRKKLQLVGITALLLASKYEEMFSPNIEDFVYITDNAYTSSQIREMETLILKELKFELGRPLPLHFLRRASKAGEVD 280          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB2_MOUSE (G2/mitotic-specific cyclin-B2 OS=Mus musculus GN=Ccnb2 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.330e-37
Identity = 78/167 (46.71%), Postives = 116/167 (69.46%), Query Frame = 1
Query:  301 DIDIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            DID + R ++PQ+C  YV DIYQYL  +EV     P   +++   +D++  MR +LVDWLV+V  +++L+ +TLY+ I  +DRFL   ++ R+KLQ++G++++L+ASKYEE+  PN+EDF YITDN YT  ++ +ME  ILK LKFELG P    FLRR ++  + D
Sbjct:  119 DIDNEDR-ENPQLCSDYVKDIYQYLRQLEVLQSINP--HFLDG--RDINGRMRAILVDWLVQVHSKFRLLQETLYMCIGIMDRFLQAQLVCRKKLQVVGITALLLASKYEEMFSPNIEDFVYITDNAYTSSQIREMETLILKELKFELGRPLPLHFLRRASKAGEVD 280          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB1_HUMAN (G2/mitotic-specific cyclin-B1 OS=Homo sapiens GN=CCNB1 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.737e-37
Identity = 75/166 (45.18%), Postives = 115/166 (69.28%), Query Frame = 1
Query:  307 DIDARSD-DPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            D+DA    DP +C  YV DIY YL  +E +   RP   Y+  + ++V+ NMR +L+DWLV+V  +++L+ +T+Y+T+S IDRF+  N + ++ LQL+GV++M IASKYEE+ PP + DF ++TDNTYTK ++ +ME  IL++L F LG P    FLRR +++ + D
Sbjct:  155 DVDAEDGADPNLCSEYVKDIYAYLRQLEEEQAVRP--KYL--LGREVTGNMRAILIDWLVQVQMKFRLLQETMYMTVSIIDRFMQNNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTDNTYTKHQIRQMEMKILRALNFGLGRPLPLHFLRRASKIGEVD 316          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB2_MESAU (G2/mitotic-specific cyclin-B2 OS=Mesocricetus auratus GN=CCNB2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.962e-37
Identity = 78/166 (46.99%), Postives = 114/166 (68.67%), Query Frame = 1
Query:  307 DIDARS-DDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            DID    ++PQ+C  YV DIYQYL  +EV     P   +++   +D++  MR +LVDWLV+V  +++L+ +TLY+ I+ +DRFL    + R+KLQL+G++++L+ASKYEE+  PN+EDF YITDN YT  ++ +ME  ILK LKFELG P    FLRR ++  + D
Sbjct:  118 DIDNEDWENPQLCSDYVKDIYQYLRQLEVLQSINP--HFLDG--RDINGRMRAILVDWLVQVHSKFRLLQETLYMCIAIMDRFLQAQPVCRKKLQLVGITALLLASKYEEMFSPNIEDFVYITDNAYTSSQIREMETLILKELKFELGRPLPLHFLRRASKAGEVD 279          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNA2_XENLA (Cyclin-A2 OS=Xenopus laevis GN=ccna2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.962e-37
Identity = 80/167 (47.90%), Postives = 116/167 (69.46%), Query Frame = 1
Query:  304 IDIDARSDDPQICGA-----YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRV 789
            +D+    ++ ++ G      Y  +I+ YL  MEV  K +P   Y++K Q D++ NMR +LVDWLVEV EEYKL ++TLYL ++YIDRFLS   + R KLQL+G ++ML+ASK+EEI PP V +F YITD+TYTK +V+KME  +LK L F+L +PT+  +L +  ++
Sbjct:  140 MDVSIVDEEQKVVGCNNVADYAKEIHTYLREMEV--KCKPKAGYMQK-QPDITGNMRAILVDWLVEVGEEYKLQNETLYLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLKMEHLVLKVLSFDLAAPTILQYLNQYFQI 303          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB2_ORYCU (G2/mitotic-specific cyclin-B2 OS=Oryzias curvinotus GN=ccnb2 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.126e-36
Identity = 78/166 (46.99%), Postives = 117/166 (70.48%), Query Frame = 1
Query:  307 DIDAR-SDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            D+D + +D PQ+C  YV DIY+YLH +E     R   +Y++  +  V+  MR +LVDWLV+V   ++L+ +TLYLT++ +D FL ++ ++R+KLQL+GV++ML+A KYE++  P V DF YITDN +TK ++V+ME  IL+SL F+LG P    FLRR ++VA  D
Sbjct:  110 DVDEQDADQPQLCSQYVKDIYKYLHVLEEQQPVRA--NYMQGYE--VTERMRALLVDWLVQVHSRFQLLQETLYLTVAILDPFLQVHPVSRRKLQLVGVTAMLVACKYEKMYAPEVGDFSYITDNAFTKSQIVEMEQVILRSLSFQLGRPLPLHFLRRASKVAGAD 271          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB1_MESAU (G2/mitotic-specific cyclin-B1 OS=Mesocricetus auratus GN=CCNB1 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.126e-36
Identity = 73/168 (43.45%), Postives = 116/168 (69.05%), Query Frame = 1
Query:  298 ADIDIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            +D+D D  +D P +C  YV DIY YL  +E +   RP   Y+  + ++V+ NMR +L+DWL++V  +++L+ +T+Y+T+S IDRF+  N + ++ LQL+GV++M IASKYEE+ PP + DF ++T+NTYTK ++ +ME  IL+ L F LG P    FLRR +++ + D
Sbjct:  150 SDVDADDGAD-PNLCSEYVKDIYAYLRQLEEEQSVRP--KYL--LGREVTGNMRAILIDWLIQVQMKFRLLQETMYMTVSIIDRFMQDNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTNNTYTKHQIRQMEMKILRVLNFSLGRPLPLHFLRRTSKIGEVD 312          
The following BLAST results are available for this feature:
BLAST of CV884711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
CCNB2_ORYLA1.571e-3848.80G2/mitotic-specific cyclin-B2 OS=Oryzias latipes G... [more]
CCNB2_MACFA7.795e-3846.39G2/mitotic-specific cyclin-B2 OS=Macaca fascicular... [more]
CCNB2_HUMAN1.018e-3746.39G2/mitotic-specific cyclin-B2 OS=Homo sapiens GN=C... [more]
CCNB2_BOVIN1.018e-3745.78G2/mitotic-specific cyclin-B2 OS=Bos taurus GN=CCN... [more]
CCNB2_MOUSE1.330e-3746.71G2/mitotic-specific cyclin-B2 OS=Mus musculus GN=C... [more]
CCNB1_HUMAN1.737e-3745.18G2/mitotic-specific cyclin-B1 OS=Homo sapiens GN=C... [more]
CCNB2_MESAU2.962e-3746.99G2/mitotic-specific cyclin-B2 OS=Mesocricetus aura... [more]
CCNA2_XENLA2.962e-3747.90Cyclin-A2 OS=Xenopus laevis GN=ccna2 PE=2 SV=1[more]
CCNB2_ORYCU1.126e-3646.99G2/mitotic-specific cyclin-B2 OS=Oryzias curvinotu... [more]
CCNB1_MESAU1.126e-3643.45G2/mitotic-specific cyclin-B1 OS=Mesocricetus aura... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010B04_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884711 ID=CV884711; Name=CV884711; organism=Citrus sinensis; type=EST; length=801bp
CTCCTCCTCTCTTGAGTCCCAAATTGAGTGAACATTAGTTTGCTAATGGC
GGATCAAGAGAACTTTGTTAGGGTCACACGGGCAGCGGCCAAGAAGAGGG
CGGCCTCCGGAAGTGCCTTGGAGCAGCCGGCCAAAAAGAAGCGGGTGGTC
TTGGGGGAGTTGCCCACCAACACAAACGTCGTCGTCTCGGTGAATCCGAG
TCTCAAGGCTGAGCCGCGTAAAGCCAAGGCCAAAGCGAAGAAGGCTTTGC
TAACGGAAAAGACCAAGGCCAAGGCCAAGACCAAGGCAACCGAGTATGCT
GATATTGACATTGATGCCAGATCCGACGACCCTCAGATCTGTGGAGCCTA
CGTCACCGACATTTACCAGTATCTTCATTCCATGGAGGTGGATCCAAAGA
GAAGGCCTTTGCCTGATTACGTAGAGAAGGTTCAGAAGGATGTGAGTGCA
AACATGAGAGGGGTGTTGGTTGACTGGTTGGTGGAGGTTGCAGAGGAATA
CAAGCTTGTTTCAGACACCCTCTATCTCACCATTTCGTATATTGATAGGT
TCCTTTCTTTGAATGTTCTCAATCGCCAGAAGCTTCAGCTGCTTGGGGTT
TCTTCAATGCTCATTGCCTCAAAGTATGAGGAAATTAGCCCTCCAAATGT
GGAAGATTTTTGCTACATTACGGATAATACCTACACCAAAGACGAGGTGG
TGAAAATGGAGGCCGATATACTCAAGTCCTTGAAGTTTGAATTGGGAAGT
CCCACTGTCAAGACATTTTTGAGGCGATTAACCAGGGTTGCACAAGAGGA
T
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