CV884711

Overview
NameCV884711
Unique NameCV884711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNA2_CHICK (Cyclin-A2 OS=Gallus gallus GN=CCNA2 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.126e-36
Identity = 83/160 (51.88%), Postives = 115/160 (71.88%), Query Frame = 1
Query:  301 DIDIDARSDD-PQICGA--YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFL 771
            DI I + +++ P +     YV+DI+ YL  MEV  K +P   Y++K Q D++ NMR +LVDWLVEV EEYKL ++TL+L ++YIDRFLS   + R KLQL+G ++ML+ASK+EEI PP V +F YITD+TY K +V++ME  ILK L F+L +PT+  FL
Sbjct:  123 DISITSEAEERPNVNNVPDYVSDIHTYLREMEV--KCKPKIGYMKK-QPDITNNMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYNKKQVLRMEHLILKVLSFDLAAPTINQFL 279          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB1_CRIGR (G2/mitotic-specific cyclin-B1 OS=Cricetulus griseus GN=CCNB1 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.470e-36
Identity = 73/168 (43.45%), Postives = 116/168 (69.05%), Query Frame = 1
Query:  298 ADIDIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            +D+D D  +D P +C  YV DIY YL  +E +   RP   Y+  + ++V+ NMR +L+DWL++V  +++L+ +T+Y+T+S IDRF+  N + ++ LQL+GV++M IASKYEE+ PP + DF ++T+NTYTK ++ +ME  IL+ L F LG P    FLRR +++ + D
Sbjct:  150 SDVDADDGAD-PNLCSEYVKDIYAYLRQLEEEQSVRPR--YL--LGREVTGNMRAILIDWLIQVQMKFRLLQETMYMTVSIIDRFMQDNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTNNTYTKHQIRQMEMKILRVLNFSLGRPLPLHFLRRASKIGEVD 312          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNA_CHLVR (G2/mitotic-specific cyclin-A (Fragment) OS=Chlorohydra viridissima PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.470e-36
Identity = 80/157 (50.96%), Postives = 110/157 (70.06%), Query Frame = 1
Query:  307 DIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRR 777
            DID++  +      Y  DI+ YL   E   K RP  +Y+ K Q D++++MR +L+DWLVEV+EEYKL+  TLYL++SYIDRFLS   + R KLQL+G + ML+A+K+EEI PP V +F YITD+TYT  +V++ME  ILK+L F+L  PT + FL R
Sbjct:  151 DIDSKLHEVFELPEYAQDIHNYLKKSEA--KYRPKSNYMRK-QTDINSSMRAILIDWLVEVSEEYKLIPQTLYLSVSYIDRFLSHMSVLRGKLQLVGAACMLVAAKFEEIYPPEVAEFVYITDDTYTAKQVLRMEHLILKTLAFDLSVPTCRDFLSR 304          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB1_MOUSE (G2/mitotic-specific cyclin-B1 OS=Mus musculus GN=Ccnb1 PE=2 SV=3)

HSP 1 Score: 152.91 bits (385), Expect = 1.920e-36
Identity = 73/168 (43.45%), Postives = 116/168 (69.05%), Query Frame = 1
Query:  298 ADIDIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            +D+D D  +D P +C  YV DIY YL  +E +   RP   Y++   ++V+ NMR +L+DWL++V  +++L+ +T+Y+T+S IDRF+  + + ++ LQL+GV++M IASKYEE+ PP + DF ++T+NTYTK ++ +ME  IL+ L F LG P    FLRR ++V + D
Sbjct:  151 SDVDADDGAD-PNLCSEYVKDIYAYLRQLEEEQSVRP--KYLQG--REVTGNMRAILIDWLIQVQMKFRLLQETMYMTVSIIDRFMQNSCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTNNTYTKHQIRQMEMKILRVLNFSLGRPLPLHFLRRASKVGEVD 313          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB_ARBPU (G2/mitotic-specific cyclin-B OS=Arbacia punctulata PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.277e-36
Identity = 78/168 (46.43%), Postives = 115/168 (68.45%), Query Frame = 1
Query:  301 DIDIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLP-DYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            DID D   D+PQ+C  Y  DIY YL  +EV+     +P +Y+++ +  ++  MR +LVDWLV+V   + L+ +TL+LT+  IDRFL+ + +++ KLQL+GV++M IASKYEE+ PP + DF YITDN YTK ++ +ME  +LK LK++LG P    FLRR ++ A  D
Sbjct:  127 DIDKDD-GDNPQLCSEYAKDIYLYLRRLEVEMM---VPANYLDRQETQITGRMRLILVDWLVQVHLRFHLLQETLFLTVQLIDRFLAEHSVSKGKLQLVGVTAMFIASKYEEMYPPEINDFVYITDNAYTKAQIRQMEIAMLKGLKYKLGKPLCLHFLRRNSKAAGVD 290          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB1_RAT (G2/mitotic-specific cyclin-B1 OS=Rattus norvegicus GN=Ccnb1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.277e-36
Identity = 72/168 (42.86%), Postives = 115/168 (68.45%), Query Frame = 1
Query:  298 ADIDIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            +D+D D    DP +C  YV DIY YL  +E +   RP   Y+  + ++V+ NMR +L+DWL++V  +++L+ +T+Y+T+S IDRF+  + + ++ LQL+GV++M IASKYEE+ PP + DF ++T+NTYTK ++ +ME  IL+ L F LG P    FLRR +++ + D
Sbjct:  144 SDVDADD-GGDPNLCSEYVKDIYAYLRQLEEEQSVRP--KYL--LGREVTGNMRAILIDWLIQVQMKFRLLQETMYMTVSIIDRFMQDSCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTNNTYTKHQIRQMEMKILRVLNFSLGRPLPLHFLRRASKIGEVD 306          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB1_BOVIN (G2/mitotic-specific cyclin-B1 OS=Bos taurus GN=CCNB1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.277e-36
Identity = 72/166 (43.37%), Postives = 114/166 (68.67%), Query Frame = 1
Query:  307 DIDARSD-DPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            D+DA    DP +C  YV DIY YL  +E +   +P   Y+  + ++V+ NMR +L+DWLV+V  +++L+ +T+Y+T+S IDRF+    + ++ LQL+GV++M +ASKYEE+ PP + DF ++TDNTYTK ++ +ME  IL++L F LG P    FLRR +++ + D
Sbjct:  149 DVDAEDGADPNLCSEYVKDIYAYLRQLEEEQAVKP--KYL--MGREVTGNMRAILIDWLVQVQIKFRLLQETMYMTVSIIDRFMQDTYVPKKMLQLVGVTAMFVASKYEEMYPPEIGDFAFVTDNTYTKFQIRQMEMKILRALNFSLGRPLPLHFLRRASKIGEVD 310          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNA1_HUMAN (Cyclin-A1 OS=Homo sapiens GN=CCNA1 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.586e-36
Identity = 80/160 (50.00%), Postives = 109/160 (68.12%), Query Frame = 1
Query:  307 DIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTR 786
            DI +   D      Y  +IYQYL   E+  + RP   Y++K Q D++  MR +LVDWLVEV EEYKL ++TLYL ++++DRFLS   + R KLQL+G ++ML+ASKYEEI PP V++F YITD+TYTK +++KME  +LK L F+L  PT   FL +  R
Sbjct:  197 DISSLGTDVINVTEYAEEIYQYLREAEI--RHRPKAHYMKK-QPDITEGMRTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAMLLASKYEEIYPPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVPTTNQFLLQYLR 353          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNA1_CARAU (Cyclin-A1 OS=Carassius auratus GN=ccna1 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.586e-36
Identity = 77/157 (49.04%), Postives = 111/157 (70.70%), Query Frame = 1
Query:  313 DARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLT 783
            +A  +D      Y  DI++YL   EV  K RP P Y+ K Q D++  MR +LVDWLVEV EEYKL S+TL+L ++Y+DRFLS   + R KLQL+G +++L+A+KYEE+ PP V++F YITD+TYTK ++++ME  +L+ L F++ +PTV  FL + T
Sbjct:  125 EAAYEDILCVPEYAEDIHRYLRECEV--KYRPKPGYMRK-QPDITNCMRVILVDWLVEVGEEYKLCSETLFLAVNYLDRFLSCMSVLRGKLQLVGTAAVLLAAKYEEVYPPEVDEFVYITDDTYTKKQLLRMEQHLLRVLAFDMTAPTVHQFLMQYT 278          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB1_ORYLA (G2/mitotic-specific cyclin-B1 OS=Oryzias latipes GN=ccnb1 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.529e-36
Identity = 70/162 (43.21%), Postives = 114/162 (70.37%), Query Frame = 1
Query:  307 DIDARS-DDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRV 789
            D+DA   D+P +C  YV DIY+YL  +E++   +P  +Y+E   ++++ NMR +L+DWLV+V  +++L+ +T+Y+T+  IDRFL  + + +++LQL+GV++M +ASKYEE+ PP + DF Y+TD  YT  ++  ME  IL+ LKF+LG P    FLRR +++
Sbjct:  128 DVDADDYDNPMLCSEYVKDIYKYLRQLEMEQSVKP--NYLEG--QEITGNMRAILIDWLVQVGLKFRLLQETMYMTVGIIDRFLQDHPVPKKQLQLVGVTAMFLASKYEEMYPPEISDFAYVTDRAYTTAQIRDMEMTILRVLKFQLGRPLPLQFLRRASKI 285          
The following BLAST results are available for this feature:
BLAST of CV884711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
CCNA2_CHICK1.126e-3651.88Cyclin-A2 OS=Gallus gallus GN=CCNA2 PE=2 SV=1[more]
CCNB1_CRIGR1.470e-3643.45G2/mitotic-specific cyclin-B1 OS=Cricetulus griseu... [more]
CCNA_CHLVR1.470e-3650.96G2/mitotic-specific cyclin-A (Fragment) OS=Chloroh... [more]
CCNB1_MOUSE1.920e-3643.45G2/mitotic-specific cyclin-B1 OS=Mus musculus GN=C... [more]
CCNB_ARBPU4.277e-3646.43G2/mitotic-specific cyclin-B OS=Arbacia punctulata... [more]
CCNB1_RAT4.277e-3642.86G2/mitotic-specific cyclin-B1 OS=Rattus norvegicus... [more]
CCNB1_BOVIN4.277e-3643.37G2/mitotic-specific cyclin-B1 OS=Bos taurus GN=CCN... [more]
CCNA1_HUMAN5.586e-3650.00Cyclin-A1 OS=Homo sapiens GN=CCNA1 PE=1 SV=1[more]
CCNA1_CARAU5.586e-3649.04Cyclin-A1 OS=Carassius auratus GN=ccna1 PE=2 SV=1[more]
CCNB1_ORYLA9.529e-3643.21G2/mitotic-specific cyclin-B1 OS=Oryzias latipes G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010B04_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884711 ID=CV884711; Name=CV884711; organism=Citrus sinensis; type=EST; length=801bp
CTCCTCCTCTCTTGAGTCCCAAATTGAGTGAACATTAGTTTGCTAATGGC
GGATCAAGAGAACTTTGTTAGGGTCACACGGGCAGCGGCCAAGAAGAGGG
CGGCCTCCGGAAGTGCCTTGGAGCAGCCGGCCAAAAAGAAGCGGGTGGTC
TTGGGGGAGTTGCCCACCAACACAAACGTCGTCGTCTCGGTGAATCCGAG
TCTCAAGGCTGAGCCGCGTAAAGCCAAGGCCAAAGCGAAGAAGGCTTTGC
TAACGGAAAAGACCAAGGCCAAGGCCAAGACCAAGGCAACCGAGTATGCT
GATATTGACATTGATGCCAGATCCGACGACCCTCAGATCTGTGGAGCCTA
CGTCACCGACATTTACCAGTATCTTCATTCCATGGAGGTGGATCCAAAGA
GAAGGCCTTTGCCTGATTACGTAGAGAAGGTTCAGAAGGATGTGAGTGCA
AACATGAGAGGGGTGTTGGTTGACTGGTTGGTGGAGGTTGCAGAGGAATA
CAAGCTTGTTTCAGACACCCTCTATCTCACCATTTCGTATATTGATAGGT
TCCTTTCTTTGAATGTTCTCAATCGCCAGAAGCTTCAGCTGCTTGGGGTT
TCTTCAATGCTCATTGCCTCAAAGTATGAGGAAATTAGCCCTCCAAATGT
GGAAGATTTTTGCTACATTACGGATAATACCTACACCAAAGACGAGGTGG
TGAAAATGGAGGCCGATATACTCAAGTCCTTGAAGTTTGAATTGGGAAGT
CCCACTGTCAAGACATTTTTGAGGCGATTAACCAGGGTTGCACAAGAGGA
T
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