CV884711
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNA2_MESAU (Cyclin-A2 OS=Mesocricetus auratus GN=CCNA2 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.729e-35 Identity = 76/143 (53.15%), Postives = 106/143 (74.13%), Query Frame = 1 Query: 349 YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRR 777 Y DI+ YL ME+ K +P Y++K Q D++ +MR +LVDWLVEV EEYKL ++TL+L ++YIDRFLS + R KLQL+G ++ML+ASK+EEI PP V +F YITD+TY+K +V++ME +LK L F+L +PTV FL + Sbjct: 167 YHEDIHTYLREMEI--KCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYSKKQVLRMEHLVLKVLAFDLAAPTVNQFLNQ 306
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB_PATVU (G2/mitotic-specific cyclin-B OS=Patella vulgata PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.067e-35 Identity = 78/166 (46.99%), Postives = 109/166 (65.66%), Query Frame = 1 Query: 307 DIDARS-DDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801 DIDA D+PQ+ YV DIY Y+ +E + +++E ++V+ MR +L+DWL +V + L+ +TLYLT+S IDRFL ++ ++R KLQL+GV+SML+ASKYEE+ P V DF YITDN YTK ++ ME ILK+L F G P FLRR ++ Q D Sbjct: 137 DIDANDKDNPQLVSDYVNDIYHYMRHLEETFAVKA--NFLEG--QEVTGKMRSILIDWLCQVHHRFHLLQETLYLTVSIIDRFLQVHPISRNKLQLVGVTSMLLASKYEEMYAPEVADFVYITDNAYTKADIRTMEQTILKTLDFSFGKPLCLHFLRRNSKAGQVD 298
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNA_PATVU (G2/mitotic-specific cyclin-A OS=Patella vulgata PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.067e-35 Identity = 76/151 (50.33%), Postives = 105/151 (69.54%), Query Frame = 1 Query: 349 YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801 Y DIY++L E + + R P Y++K Q D++ +MR +LVDW+VEV+EEYKL +TL+L I+YIDRFLS + R KLQL+G +SM IASKYEEI PP V +F YITD+TY + +V++ME ILK L F++ PT+ F ++A D Sbjct: 171 YAEDIYKHLR--EAESRHRSKPGYMKK-QPDITNSMRSILVDWMVEVSEEYKLHRETLFLAINYIDRFLSQMSVLRGKLQLVGAASMFIASKYEEIYPPEVSEFVYITDDTYEQKQVLRMEHLILKVLSFDVAQPTINWFTDTYAKMADTD 318
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNA2_MOUSE (Cyclin-A2 OS=Mus musculus GN=Ccna2 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.067e-35 Identity = 76/141 (53.90%), Postives = 105/141 (74.47%), Query Frame = 1 Query: 349 YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFL 771 Y DI+ YL MEV K +P Y+++ Q D++ +MR +LVDWLVEV EEYKL ++TL+L ++YIDRFLS + R KLQL+G ++ML+ASK+EEI PP V +F YITD+TY+K +V++ME +LK L F+L +PTV FL Sbjct: 168 YQEDIHTYLREMEV--KCKPKVGYMKR-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYSKKQVLRMEHLVLKVLAFDLAAPTVNQFL 305
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNA1_XENLA (Cyclin-A1 OS=Xenopus laevis GN=ccna1 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.067e-35 Identity = 77/155 (49.68%), Postives = 108/155 (69.68%), Query Frame = 1 Query: 307 DIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFL 771 D D Y+ +I+QYL E+ K RP Y+ K Q D+++ MR +LVDWLVEV EEYKL ++TLYL ++Y+DRFLS + R KLQL+G +++L+ASKYEEI PP+V++F YITD+TY+K ++++ME +LK L F+L PTV FL Sbjct: 150 DDSVTDPDAVAVSEYIHEIHQYLREAEL--KHRPKAYYMRK-QPDITSAMRTILVDWLVEVGEEYKLHTETLYLAMNYLDRFLSCMSVLRGKLQLVGTAAILLASKYEEIYPPDVDEFVYITDDTYSKKQLLRMEHVLLKVLAFDLTVPTVNQFL 301
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNA_DROME (G2/mitotic-specific cyclin-A OS=Drosophila melanogaster GN=CycA PE=2 SV=3) HSP 1 Score: 147.132 bits (370), Expect = 1.054e-34 Identity = 74/141 (52.48%), Postives = 103/141 (73.05%), Query Frame = 1 Query: 349 YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFL 771 Y DI +Y E + K RP P Y+ + QKD+S NMR +L+DWLVEV+EEYKL ++TLYL++ Y+DRFLS + R KLQL+G ++M IA+KYEEI PP V +F ++TD++YTK +V++ME ILK L F+L +PT F+ Sbjct: 203 YQMDILEYFR--ESEKKHRPKPLYMRR-QKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMAVVRSKLQLVGTAAMYIAAKYEEIYPPEVGEFVFLTDDSYTKAQVLRMEQVILKILSFDLCTPTAYVFI 340
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB2_RANJA (G2/mitotic-specific cyclin-B2 OS=Rana japonica GN=CCNB2 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.376e-34 Identity = 74/167 (44.31%), Postives = 109/167 (65.27%), Query Frame = 1 Query: 304 IDIDARSD-DPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801 +DIDA +PQ+C YV DIY YL EV + Y++ ++ ++ MR +LVDWL++V ++ + +TLY+ I+ +DRFL + ++R KLQL+GV+S+L+ASKYEE+ P V DF YITDN YT ++ +ME IL+ LKF+LG P FLRR ++ D Sbjct: 113 VDIDAEDGGNPQLCSEYVVDIYNYLREREVQQSIKQR--YLDGME--INERMRAILVDWLIQVNSRFQFLQETLYMGIAIMDRFLQVQPISRGKLQLVGVTSLLLASKYEEMYSPEVADFAYITDNAYTTSQIREMEMIILRELKFDLGRPLPLHFLRRASKACSAD 275
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB1_CARAU (G2/mitotic-specific cyclin-B1 OS=Carassius auratus GN=ccnb1 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.797e-34 Identity = 71/162 (43.83%), Postives = 109/162 (67.28%), Query Frame = 1 Query: 307 DIDARS-DDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRV 789 D+DA D+P +C YV DIY YL +E++ RP Y+E +V+ NMR +L+DWLV+V ++KL+ +T+Y+T++ IDRFL + + +++LQL+GV++M IASKYEE+ PP + DF ++TD YT ++ ME IL+ L F G P FLRR +++ Sbjct: 121 DVDADDYDNPMLCSEYVKDIYLYLRQLEIEQAVRP--KYLEG--SEVTGNMRAILIDWLVQVQIKFKLLQETMYMTVAVIDRFLQDHPVPKKQLQLVGVTAMFIASKYEEMYPPEIADFAFVTDRAYTTGQIRDMEMKILRVLDFSFGKPLPLQFLRRASKI 278
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCF31_ORYSJ (Putative cyclin-F3-1 OS=Oryza sativa subsp. japonica GN=CYCF3-1 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.797e-34 Identity = 71/144 (49.31%), Postives = 104/144 (72.22%), Query Frame = 1 Query: 349 YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDV-SANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRR 777 YV DI +YL S+E + RRP+ +YV+++Q + + ++RG+LVDW+ +VA + L +TL+ +SY+DRFLS KL+LLG +++ +ASKYEEI PP+V +F +T NTYT +V KME DIL+ L F++GSPTV TFLR+ Sbjct: 114 YVEDIDRYLRSLEAEQTRRPMINYVQEIQGGIINMDVRGILVDWMADVAYVFNLQEETLHHAVSYVDRFLSKIAFPGDKLKLLGTTALFVASKYEEIHPPHVRNFSAVTVNTYTTQQVSKMELDILRFLNFDVGSPTVITFLRK 257
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNA1_RAT (Cyclin-A1 OS=Rattus norvegicus GN=Ccna1 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.065e-34 Identity = 74/146 (50.68%), Postives = 105/146 (71.92%), Query Frame = 1 Query: 349 YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTR 786 Y +I++YL EV + RP Y+ K Q D++ MR +LVDWLVEV EEYKL ++TLYL ++++DRFLS + R KLQL+G +++L+ASKYEEI PP+V++F YITD+TYTK ++++ME +LK L F+L PT FL + R Sbjct: 167 YAEEIHRYLREAEV--RHRPKAHYMRK-QPDITEGMRAILVDWLVEVGEEYKLRTETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAILLASKYEEIYPPDVDEFVYITDDTYTKRQLLRMEHLLLKVLAFDLTVPTTNQFLLQYLR 309 The following BLAST results are available for this feature:
BLAST of CV884711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884711 ID=CV884711; Name=CV884711; organism=Citrus sinensis; type=EST; length=801bpback to top |