CV884711

Overview
NameCV884711
Unique NameCV884711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNA1_MOUSE (Cyclin-A1 OS=Mus musculus GN=Ccna1 PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 3.065e-34
Identity = 74/146 (50.68%), Postives = 105/146 (71.92%), Query Frame = 1
Query:  349 YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTR 786
            Y  +I++YL   EV  + RP   Y+ K Q D++  MR +LVDWLVEV EEYKL ++TLYL ++++DRFLS   + R KLQL+G +++L+ASKYEEI PP+V++F YITD+TYTK ++++ME  +LK L F+L  PT   FL +  R
Sbjct:  167 YAEEIHRYLREAEV--RHRPKAHYMRK-QPDITEGMRAILVDWLVEVGEEYKLRTETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAILLASKYEEIYPPDVDEFVYITDDTYTKRQLLRMEHLLLKVLAFDLTVPTTNQFLLQYLR 309          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB_SPISO (G2/mitotic-specific cyclin-B OS=Spisula solidissima PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.229e-34
Identity = 77/166 (46.39%), Postives = 107/166 (64.46%), Query Frame = 1
Query:  307 DIDARS-DDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            +IDA   ++PQ+   YV DIY Y+  +E     R   +Y+E   ++++  MR +L+DWL +V   + L+ +TLYLT++ IDR L  + + R KLQL+GV+SMLIASKYEE+  P V DF YITDN YTK E+++ME  ILK L F  G P    FLRR ++  Q D
Sbjct:  154 NIDANDKENPQLVSEYVNDIYDYMRDLEGKYPIRH--NYLEN--QEITGKMRAILIDWLCQVHHRFHLLQETLYLTVAIIDRLLQESPVPRNKLQLVGVTSMLIASKYEEMYAPEVADFVYITDNAYTKKEILEMEQHILKKLNFSFGRPLCLHFLRRDSKAGQVD 315          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB1_XENLA (G2/mitotic-specific cyclin-B1 OS=Xenopus laevis GN=ccnb1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.389e-33
Identity = 69/164 (42.07%), Postives = 112/164 (68.29%), Query Frame = 1
Query:  307 DIDARSD-DPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQ 795
            D+DA  D +P +C  YV DIY YL S+E     R   +Y+    ++V+ NMR +L+DWLV+V  +++L+ +T+++T+  IDRFL  + + + +LQL+GV++M +A+KYEE+ PP + DF ++TD+TYTK ++  ME  IL+ LKF +G P    FLRR +++ +
Sbjct:  121 DVDADDDGNPMLCSEYVKDIYAYLRSLEDAQAVRQ--NYLHG--QEVTGNMRAILIDWLVQVQMKFRLLQETMFMTVGIIDRFLQEHPVPKNQLQLVGVTAMFLAAKYEEMYPPEIGDFTFVTDHTYTKAQIRDMEMKILRVLKFAIGRPLPLHFLRRASKIGE 280          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CG23_SCHPO (G2/mitotic-specific cyclin cdc13 OS=Schizosaccharomyces pombe GN=cdc13 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.426e-33
Identity = 68/161 (42.24%), Postives = 112/161 (69.57%), Query Frame = 1
Query:  307 DIDARS-DDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTR 786
            D+DA    DP +   YV DI++YL+ +E++    P P Y+++ QK+++  MRG+L DWL+EV   ++L+ +TL+L ++ IDRFLSL V +  KLQL+G++++ IASKYEE+  P+V++F Y+ D  Y ++E+++ E  IL+ L+F L  P    FLRR+++
Sbjct:  188 DLDAEDWADPLMVSEYVVDIFEYLNELEIETM--PSPTYMDR-QKELAWKMRGILTDWLIEVHSRFRLLPETLFLAVNIIDRFLSLRVCSLNKLQLVGIAALFIASKYEEVMCPSVQNFVYMADGGYDEEEILQAERYILRVLEFNLAYPNPMNFLRRISK 345          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNA_SPISO (G2/mitotic-specific cyclin-A OS=Spisula solidissima PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.682e-32
Identity = 74/151 (49.01%), Postives = 102/151 (67.55%), Query Frame = 1
Query:  349 YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            Y  DIY YL   E+  K R  P Y+++ Q D++ +MR +LVDWLVEV+EE KL  +TL+L ++YIDRFLS   + R KLQL+G +SM +A+KYEEI PP+V++F YITD+TYT  +V++ME  ILK L F++  PT   F     +    D
Sbjct:  163 YEEDIYNYLRQAEM--KNRAKPGYMKR-QTDITTSMRCILVDWLVEVSEEDKLHRETLFLGVNYIDRFLSKISVLRGKLQLVGAASMFLAAKYEEIYPPDVKEFAYITDDTYTSQQVLRMEHLILKVLTFDVAVPTTNWFCEDFLKSCDAD 310          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB_CHLVR (G2/mitotic-specific cyclin-B OS=Chlorohydra viridissima PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.747e-32
Identity = 68/167 (40.72%), Postives = 110/167 (65.87%), Query Frame = 1
Query:  301 DIDIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            DID++   + P +C  YV DIY+Y++ +E    +R +P      Q +++  MR +LVDWL++V   + L+ +TLYLTI  +DRFL+   + R +LQL+GV++ML+ASKYEE+  P + DF YITDN Y+K+++ +ME  +LK+ +++  +P    FLRR ++    D
Sbjct:  119 DIDLEDLGN-PTLCAEYVKDIYKYMNKLE----QRLVPGDYMPNQTEINFKMRSILVDWLIQVQSRFNLLQETLYLTIYILDRFLNKQNVKRAELQLVGVTAMLLASKYEEMYAPEIGDFVYITDNAYSKEKIRQMEQKMLKACEYDFSNPLCLHFLRRNSKAGAVD 280          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB_HYDAT (G2/mitotic-specific cyclin-B (Fragment) OS=Hydra attenuata PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.392e-32
Identity = 70/167 (41.92%), Postives = 108/167 (64.67%), Query Frame = 1
Query:  301 DIDIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            DID++   + P +C  Y+ DIY+Y++ +E    RR  P      Q +++  MR +LVDWL++V   + L+ +TLYLTI  IDR+LS   + R +LQL GV++MLIASKYEE+  P + DF YITDN Y+K+++ +ME  +LK+ +++  +P    FLRR ++    D
Sbjct:   88 DIDLEDLGN-PTLCAEYLKDIYKYMNKLE----RRLEPSDYMAHQAEINFKMRSILVDWLIQVQSRFNLLQETLYLTIYIIDRYLSKQNVKRAELQLEGVTAMLIASKYEEMYAPEIGDFVYITDNAYSKEKIRQMEQKMLKTCEYDFSNPLCLHFLRRNSKAGAVD 249          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CG21_EMENI (G2/mitotic-specific cyclin-B OS=Emericella nidulans GN=nimE PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.090e-31
Identity = 68/168 (40.48%), Postives = 109/168 (64.88%), Query Frame = 1
Query:  298 ADIDIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            AD+D +   DDP +   YV +I+ YL  +E++    P PDY++  Q D+   MRG+LVDWL+EV   ++L+ +TL+L ++ IDRFLS  V+   +LQL+GV++M IASKYEE+  P+V +F ++ D T++  E++  E  IL +L++ +  P    FLRR+++    D
Sbjct:  192 ADLDTEDL-DDPLMAAEYVVEIFDYLRELEMETL--PNPDYIDH-QPDLEWKMRGILVDWLIEVHTRFRLLPETLFLAVNIIDRFLSAEVVALDRLQLVGVAAMFIASKYEEVLSPHVANFSHVADETFSDKEILDAERHILATLEYNMSYPNPMNFLRRISKADNYD 355          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCB21_ORYSJ (Cyclin-B2-1 OS=Oryza sativa subsp. japonica GN=CYCB2-1 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.424e-31
Identity = 70/167 (41.92%), Postives = 110/167 (65.87%), Query Frame = 1
Query:  304 IDID-ARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            +DID A S +P     YV ++Y++    E +      PDY+   Q D++  MR +L+DWL+EV  +++L+ +TL+LT++ +DRFL   V+ R+KLQL+GV++ML+A KYEE++ P VED   I+D  YTK ++++ME  IL +L+F +  PT   F+RR  + AQ D
Sbjct:  138 MDIDSADSGNPLAATEYVEELYKFYR--ENEEMSCVQPDYMSS-QGDINEKMRAILIDWLIEVHHKFELMDETLFLTVNIVDRFLEKQVVPRKKLQLVGVTAMLLACKYEEVAVPVVEDLVLISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRRFLKAAQSD 301          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCB21_ORYSI (Cyclin-B2-1 OS=Oryza sativa subsp. indica GN=CYCB2-1 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.424e-31
Identity = 70/167 (41.92%), Postives = 110/167 (65.87%), Query Frame = 1
Query:  304 IDID-ARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            +DID A S +P     YV ++Y++    E +      PDY+   Q D++  MR +L+DWL+EV  +++L+ +TL+LT++ +DRFL   V+ R+KLQL+GV++ML+A KYEE++ P VED   I+D  YTK ++++ME  IL +L+F +  PT   F+RR  + AQ D
Sbjct:  138 MDIDSADSGNPLAATEYVEELYKFYR--ENEEMSCVQPDYMSS-QGDINEKMRAILIDWLIEVHHKFELMDETLFLTVNIVDRFLEKQVVPRKKLQLVGVTAMLLACKYEEVAVPVVEDLVLISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRRFLKAAQSD 301          
The following BLAST results are available for this feature:
BLAST of CV884711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
CCNA1_MOUSE3.065e-3450.68Cyclin-A1 OS=Mus musculus GN=Ccna1 PE=1 SV=2[more]
CCNB_SPISO5.229e-3446.39G2/mitotic-specific cyclin-B OS=Spisula solidissim... [more]
CCNB1_XENLA3.389e-3342.07G2/mitotic-specific cyclin-B1 OS=Xenopus laevis GN... [more]
CG23_SCHPO4.426e-3342.24G2/mitotic-specific cyclin cdc13 OS=Schizosaccharo... [more]
CCNA_SPISO1.682e-3249.01G2/mitotic-specific cyclin-A OS=Spisula solidissim... [more]
CCNB_CHLVR3.747e-3240.72G2/mitotic-specific cyclin-B OS=Chlorohydra viridi... [more]
CCNB_HYDAT6.392e-3241.92G2/mitotic-specific cyclin-B (Fragment) OS=Hydra a... [more]
CG21_EMENI1.090e-3140.48G2/mitotic-specific cyclin-B OS=Emericella nidulan... [more]
CCB21_ORYSJ1.424e-3141.92Cyclin-B2-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCB21_ORYSI1.424e-3141.92Cyclin-B2-1 OS=Oryza sativa subsp. indica GN=CYCB2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010B04_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884711 ID=CV884711; Name=CV884711; organism=Citrus sinensis; type=EST; length=801bp
CTCCTCCTCTCTTGAGTCCCAAATTGAGTGAACATTAGTTTGCTAATGGC
GGATCAAGAGAACTTTGTTAGGGTCACACGGGCAGCGGCCAAGAAGAGGG
CGGCCTCCGGAAGTGCCTTGGAGCAGCCGGCCAAAAAGAAGCGGGTGGTC
TTGGGGGAGTTGCCCACCAACACAAACGTCGTCGTCTCGGTGAATCCGAG
TCTCAAGGCTGAGCCGCGTAAAGCCAAGGCCAAAGCGAAGAAGGCTTTGC
TAACGGAAAAGACCAAGGCCAAGGCCAAGACCAAGGCAACCGAGTATGCT
GATATTGACATTGATGCCAGATCCGACGACCCTCAGATCTGTGGAGCCTA
CGTCACCGACATTTACCAGTATCTTCATTCCATGGAGGTGGATCCAAAGA
GAAGGCCTTTGCCTGATTACGTAGAGAAGGTTCAGAAGGATGTGAGTGCA
AACATGAGAGGGGTGTTGGTTGACTGGTTGGTGGAGGTTGCAGAGGAATA
CAAGCTTGTTTCAGACACCCTCTATCTCACCATTTCGTATATTGATAGGT
TCCTTTCTTTGAATGTTCTCAATCGCCAGAAGCTTCAGCTGCTTGGGGTT
TCTTCAATGCTCATTGCCTCAAAGTATGAGGAAATTAGCCCTCCAAATGT
GGAAGATTTTTGCTACATTACGGATAATACCTACACCAAAGACGAGGTGG
TGAAAATGGAGGCCGATATACTCAAGTCCTTGAAGTTTGAATTGGGAAGT
CCCACTGTCAAGACATTTTTGAGGCGATTAACCAGGGTTGCACAAGAGGA
T
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