CV884711

Overview
NameCV884711
Unique NameCV884711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB3_CHICK (G2/mitotic-specific cyclin-B3 OS=Gallus gallus GN=CCNB3 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.143e-31
Identity = 71/164 (43.29%), Postives = 104/164 (63.41%), Query Frame = 1
Query:  307 DIDARS-DDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQ 795
            DID     DP     Y  +I+ Y+   E   ++  LPDY+EK Q D+S +MR +LVDW+VEV E ++L  +TLYL +  +D +L   V  R KLQL+G +++LIASK+EE  PP V+DF YI D+ Y ++E++ ME  IL++L F++  P    FLRR  + A+
Sbjct:  131 DIDKEQLGDPYANAEYAKEIFDYMRERE---EKFLLPDYMEK-QSDISRDMRAILVDWMVEVQENFELNHETLYLAVKLVDHYLVEVVSMRDKLQLIGSTAVLIASKFEERCPPCVDDFLYICDDAYKREELIAMETSILRTLNFDINIPIPYRFLRRFAKCAR 290          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCF32_ORYSJ (Putative cyclin-F3-2 OS=Oryza sativa subsp. japonica GN=CYCF3-2 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.230e-31
Identity = 73/158 (46.20%), Postives = 101/158 (63.92%), Query Frame = 1
Query:  349 YVTDIYQYLHSME---------------VDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRR 777
            YV DI +YL S+E                +  RRP+ +Y +++Q     NMRG LV+W+ E+   + L  + LYL +SY+DRFLS NV+NR++LQLLG S++ +ASKYE+   P+   F  IT +TYT  +VV MEA+IL  L F++GSPTV TFLRR
Sbjct:  119 YVEDIDRYLRSLEGREMAKCLDAVQFCTAEESRRPIVNYDQEIQGG-HINMRGKLVNWMEELVYGFNLWDNILYLAVSYVDRFLSRNVVNRERLQLLGTSALFVASKYEDRCHPSARFFSSITADTYTTQQVVAMEANILSFLNFQMGSPTVITFLRR 275          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB1_MEDVA (G2/mitotic-specific cyclin-1 OS=Medicago varia PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.685e-30
Identity = 69/167 (41.32%), Postives = 108/167 (64.67%), Query Frame = 1
Query:  304 IDIDAR-SDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            +DID   ++DP     Y+ D+Y Y    +V+      P+Y+ + Q D++  MR +LVDWL+EV +++ L+ +TL+LT++ IDRFL    + R+KLQL+G+ +ML+A KYEE+S P V D   I+D  YT+ EV++ME  ++ +LKF +  PT   F+RR  + AQ D
Sbjct:  156 MDIDTPDANDPLAVAEYIEDLYSYYR--KVESTSCVSPNYMAQ-QFDINERMRAILVDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRFLKAAQAD 319          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB3_DROME (G2/mitotic-specific cyclin-B3 OS=Drosophila melanogaster GN=CycB3 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.507e-30
Identity = 70/164 (42.68%), Postives = 102/164 (62.20%), Query Frame = 1
Query:  307 DIDARS-DDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQ 795
            D D ++ DDP     Y  DI+ YL   E +    P+ DY+ + Q  ++  MR +LVDW+VEV E ++L  +TLYL +  +D +L   V+N++KLQLLG ++  IA KY+E  PP +EDF YI D  Y  DE+V+ME + L+ +K++LG P    FLRR  R A+
Sbjct:  290 DFDRKNWDDPFQVSHYAMDIFNYLKVREAE---FPIADYMPR-QIHLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVINKEKLQLLGAAAFFIACKYDERQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFLRRYARCAK 449          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB1_SOYBN (G2/mitotic-specific cyclin S13-6 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.020e-29
Identity = 69/167 (41.32%), Postives = 107/167 (64.07%), Query Frame = 1
Query:  304 IDIDARSDDPQICGA-YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            IDIDA   D ++    Y+ DIY++   +E + +     DY+   Q +++  MR +LVDWL++V  +++L  +TLYLTI+ IDRFL++  + R++LQL+G+S+ML+ASKYEEI PP V DF  ++D  YT + ++ ME  IL  L++ L  PT   FL R  + +  D
Sbjct:  178 IDIDASDVDNELAAVEYIDDIYKFYKLVENESRPH---DYIGS-QPEINERMRAILVDWLIDVHTKFELSLETLYLTINIIDRFLAVKTVPRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEHILTMEKTILNKLEWTLTVPTPLVFLVRFIKASVPD 340          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCB12_ARATH (Cyclin-B1-2 OS=Arabidopsis thaliana GN=CYCB1-2 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.333e-29
Identity = 67/167 (40.12%), Postives = 105/167 (62.87%), Query Frame = 1
Query:  304 IDIDARSDDPQICGA-YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            IDID    D  +    YV D+Y +   +E + +    P     +Q +++  MR +L+DWL+EV  +++L  +TLYLT++ IDRFLS+  + +++LQL+G+S++LIASKYEEI PP V D  Y+TDN Y+  +++ ME  IL +L++ L  PT   FL R  + +  D
Sbjct:  166 IDIDESDKDNHLAAVEYVDDMYSFYKEVEKESQ----PKMYMHIQTEMNEKMRAILIDWLLEVHIKFELNLETLYLTVNIIDRFLSVKAVPKRELQLVGISALLIASKYEEIWPPQVNDLVYVTDNAYSSRQILVMEKAILGNLEWYLTVPTQYVFLVRFIKASMSD 328          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCB21_ARATH (Cyclin-B2-1 OS=Arabidopsis thaliana GN=CYCB2-1 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.741e-29
Identity = 68/168 (40.48%), Postives = 111/168 (66.07%), Query Frame = 1
Query:  304 IDIDARSDDPQICGA-YVTDIYQYLHSMEVDPKRRPLP-DYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            +DID       +    YV D+Y +  +ME   +   +P DY+ + Q D++  MR +L+DWL+EV +++ L+++TL+LT++ IDRFLS   + R+KLQL+G+ ++L+A KYEE+S P VED   I+D  YT+++V++ME  +L +L+F +  PT   FL+R  + AQ D
Sbjct:  155 VDIDVLDSKNSLAAVEYVQDLYAFYRTME---RFSCVPVDYMMQ-QIDLNEKMRAILIDWLIEVHDKFDLINETLFLTVNLIDRFLSKQNVMRKKLQLVGLVALLLACKYEEVSVPVVEDLVLISDKAYTRNDVLEMEKTMLSTLQFNISLPTQYPFLKRFLKAAQAD 318          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCB14_ARATH (Cyclin-B1-4 OS=Arabidopsis thaliana GN=CYCB1-4 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.741e-29
Identity = 69/166 (41.57%), Postives = 109/166 (65.66%), Query Frame = 1
Query:  298 ADIDIDARSDDPQICGA-YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVA 792
            A IDIDA   + ++    YV DI+++  ++E   +   + DY+   Q +++  MR +L+DWLV+V  +++L+ +TLYLTI+ +DRFLSL +++R++LQLLG+ +MLIA KYEEI  P V DF  I+DN Y + +V+ ME  IL  +++ +  PT   FL R  + A
Sbjct:  112 AVIDIDAVDANNELAAVEYVEDIFKFYRTVE---EEGGIKDYIGS-QPEINEKMRSILIDWLVDVHRKFELMPETLYLTINLVDRFLSLTMVHRRELQLLGLGAMLIACKYEEIWAPEVNDFVCISDNAYNRKQVLAMEKSILGQVEWYITVPTPYVFLARYVKAA 273          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB3_CANFA (G2/mitotic-specific cyclin-B3 OS=Canis familiaris GN=CCNB3 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.969e-29
Identity = 68/160 (42.50%), Postives = 98/160 (61.25%), Query Frame = 1
Query:  307 DIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTR 786
            DID    DP     Y  DI+ Y+   E   ++  L +Y+ K Q D+S+ MR +LVDWLVEV   +++  +TLYL +  +D +L   +  R KLQLLG ++ LIA+K+EE  PP V+DF YI D+ Y + E++ ME  IL++LKF++  P    FLRR  R
Sbjct: 1058 DIDRNHGDPFFNSIYAKDIFSYMKERE---EKFILKEYMNK-QTDISSCMRAILVDWLVEVQMTFEMSHETLYLAVKLVDHYLMEVICKRDKLQLLGSTAFLIAAKFEEPCPPCVDDFLYICDDIYQRHEMLSMEISILQTLKFDINIPIAYHFLRRYAR 1213          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCB23_ARATH (Cyclin-B2-3 OS=Arabidopsis thaliana GN=CYCB2-3 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.969e-29
Identity = 67/167 (40.12%), Postives = 109/167 (65.27%), Query Frame = 1
Query:  304 IDIDA-RSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            IDIDA   ++P     Y+ D++ +  + E   K   +P      Q+D++  MRG+L+DWL+EV  +++L+ +TLYLTI+ IDRFL+++ + R+KLQL+GV+++L+A KYEE+S P V+D   I+D  Y++ EV+ ME  +  +L+F    PT   F++R  + AQ D
Sbjct:  161 IDIDACDKNNPLAAVEYIHDMHTFYKNFE---KLSCVPPNYMDNQQDLNERMRGILIDWLIEVHYKFELMEETLYLTINVIDRFLAVHQIVRKKLQLVGVTALLLACKYEEVSVPVVDDLILISDKAYSRREVLDMEKLMANTLQFNFSLPTPYVFMKRFLKAAQSD 324          
The following BLAST results are available for this feature:
BLAST of CV884711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
CCNB3_CHICK4.143e-3143.29G2/mitotic-specific cyclin-B3 OS=Gallus gallus GN=... [more]
CCF32_ORYSJ9.230e-3146.20Putative cyclin-F3-2 OS=Oryza sativa subsp. japoni... [more]
CCNB1_MEDVA2.685e-3041.32G2/mitotic-specific cyclin-1 OS=Medicago varia PE=... [more]
CCNB3_DROME3.507e-3042.68G2/mitotic-specific cyclin-B3 OS=Drosophila melano... [more]
CCNB1_SOYBN1.020e-2941.32G2/mitotic-specific cyclin S13-6 OS=Glycine max PE... [more]
CCB12_ARATH1.333e-2940.12Cyclin-B1-2 OS=Arabidopsis thaliana GN=CYCB1-2 PE=... [more]
CCB21_ARATH1.741e-2940.48Cyclin-B2-1 OS=Arabidopsis thaliana GN=CYCB2-1 PE=... [more]
CCB14_ARATH1.741e-2941.57Cyclin-B1-4 OS=Arabidopsis thaliana GN=CYCB1-4 PE=... [more]
CCNB3_CANFA2.969e-2942.50G2/mitotic-specific cyclin-B3 OS=Canis familiaris ... [more]
CCB23_ARATH2.969e-2940.12Cyclin-B2-3 OS=Arabidopsis thaliana GN=CYCB2-3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010B04_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884711 ID=CV884711; Name=CV884711; organism=Citrus sinensis; type=EST; length=801bp
CTCCTCCTCTCTTGAGTCCCAAATTGAGTGAACATTAGTTTGCTAATGGC
GGATCAAGAGAACTTTGTTAGGGTCACACGGGCAGCGGCCAAGAAGAGGG
CGGCCTCCGGAAGTGCCTTGGAGCAGCCGGCCAAAAAGAAGCGGGTGGTC
TTGGGGGAGTTGCCCACCAACACAAACGTCGTCGTCTCGGTGAATCCGAG
TCTCAAGGCTGAGCCGCGTAAAGCCAAGGCCAAAGCGAAGAAGGCTTTGC
TAACGGAAAAGACCAAGGCCAAGGCCAAGACCAAGGCAACCGAGTATGCT
GATATTGACATTGATGCCAGATCCGACGACCCTCAGATCTGTGGAGCCTA
CGTCACCGACATTTACCAGTATCTTCATTCCATGGAGGTGGATCCAAAGA
GAAGGCCTTTGCCTGATTACGTAGAGAAGGTTCAGAAGGATGTGAGTGCA
AACATGAGAGGGGTGTTGGTTGACTGGTTGGTGGAGGTTGCAGAGGAATA
CAAGCTTGTTTCAGACACCCTCTATCTCACCATTTCGTATATTGATAGGT
TCCTTTCTTTGAATGTTCTCAATCGCCAGAAGCTTCAGCTGCTTGGGGTT
TCTTCAATGCTCATTGCCTCAAAGTATGAGGAAATTAGCCCTCCAAATGT
GGAAGATTTTTGCTACATTACGGATAATACCTACACCAAAGACGAGGTGG
TGAAAATGGAGGCCGATATACTCAAGTCCTTGAAGTTTGAATTGGGAAGT
CCCACTGTCAAGACATTTTTGAGGCGATTAACCAGGGTTGCACAAGAGGA
T
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