CV884711

Overview
NameCV884711
Unique NameCV884711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB3_HUMAN (G2/mitotic-specific cyclin-B3 OS=Homo sapiens GN=CCNB3 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 7.313e-28
Identity = 64/160 (40.00%), Postives = 98/160 (61.25%), Query Frame = 1
Query:  307 DIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTR 786
            DID  S DP     Y  +I+ Y+   E   ++  L DY+ + Q +++++MR +LVDWLVEV   +++  +TLYL +  +D +L   V  + KLQLLG ++ +IA+K+EE + P V+DF YI D+ Y + EV+ ME +IL  LK ++  P    FLRR  R
Sbjct: 1115 DIDEDSSDPSFNPMYAKEIFSYMKERE---EQFILTDYMNR-QIEITSDMRAILVDWLVEVQVSFEMTHETLYLAVKLVDLYLMKAVCKKDKLQLLGATAFMIAAKFEEHNSPRVDDFVYICDDNYQRSEVLSMEINILNVLKCDINIPIAYHFLRRYAR 1270          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCB11_ORYSJ (Cyclin-B1-1 OS=Oryza sativa subsp. japonica GN=CYCB1-1 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.629e-27
Identity = 65/158 (41.14%), Postives = 104/158 (65.82%), Query Frame = 1
Query:  307 DIDARSDDPQICGA-YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRR 777
            DID    D ++    Y+ DIY++    E +   RP  DY++  Q ++++ MR +L DW++EV  +++L+ +TLYL++  IDR+LS+  + R++LQL+GVS+MLIA KYEEI  P V DF  I+D+ YT+++++ ME  IL  L++ L  PT   F+ R
Sbjct:  177 DIDKLDGDNELAVVDYIEDIYKFYKVAENEC--RPC-DYID-TQVEINSKMRAILADWIIEVHHKFELMPETLYLSMYVIDRYLSMQQVQRRELQLVGVSAMLIACKYEEIWAPEVNDFILISDSAYTREQILAMEKGILNKLQWNLTVPTAYVFIMR 330          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CG22_YEAST (G2/mitotic-specific cyclin-2 OS=Saccharomyces cerevisiae GN=CLB2 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.128e-27
Identity = 68/168 (40.48%), Postives = 104/168 (61.90%), Query Frame = 1
Query:  307 DIDARS-DDPQICGAYVTDIYQYLHSMEVD--PKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            D+DA   +DP +   YV DI++YLH +EV   PK+  L  +     +++  N R +LV+WLV++  ++ L+ +TLYL I+ +DRFL   ++   KLQL+G S + IASKYEE+  P+++ F   TD   T+DE+ + E  ILK+LKF L  P    FLRR+++    D
Sbjct:  214 DLDAEDVNDPFMVSEYVNDIFEYLHQLEVITLPKKEDLYQH-----RNIHQN-RDILVNWLVKIHNKFGLLPETLYLAINIMDRFLGKELVQLDKLQLVGTSCLFIASKYEEVYSPSIKHFASETDGACTEDEIKEGEKFILKTLKFNLNYPNPMNFLRRISKADDYD 375          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB2_SOYBN (G2/mitotic-specific cyclin S13-7 (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.128e-27
Identity = 63/148 (42.57%), Postives = 98/148 (66.22%), Query Frame = 1
Query:  358 DIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            DIY++   +E +       DY++  Q +++  MR +LVDWL++V  +++L  +TLYLTI+ IDRFL++  + R++LQL+G+S+ML+ASKYEEI PP V DF  ++D  YT ++++ ME  IL  L++ L  PT   FL R  + A  D
Sbjct:    1 DIYKFYKLVENESHPH---DYIDS-QPEINERMRAILVDWLIDVHTKFELSLETLYLTINIIDRFLAVKTVPRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEQILAMEKTILNKLEWTLTVPTPFVFLVRFIKAAVPD 144          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB2_MEDVA (G2/mitotic-specific cyclin-2 OS=Medicago varia PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.779e-27
Identity = 60/151 (39.74%), Postives = 100/151 (66.23%), Query Frame = 1
Query:  349 YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            Y+ D++ Y   +E        P Y+++ Q D++  MR +LVDWL+EV +++ L+ +TL+LT++ IDRFL+   + R+KLQL+G+ +ML+A KYEE+S P V D  +I D  YT+ ++++ME  +L +L++ +  PT   F+RR  + AQ D
Sbjct:  176 YIEDLHAYYRKIEY--LGCVSPTYMDE-QLDLNERMRAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKLQLVGLVAMLLACKYEEVSVPVVSDLIHIADRAYTRKDILEMEKLMLNTLQYNMSLPTAYVFMRRFLKAAQAD 323          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNB2_MEDSA (G2/mitotic-specific cyclin-2 (Fragment) OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.779e-27
Identity = 60/151 (39.74%), Postives = 100/151 (66.23%), Query Frame = 1
Query:  349 YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            Y+ D++ Y   +E        P Y+++ Q D++  MR +LVDWL+EV +++ L+ +TL+LT++ IDRFL+   + R+KLQL+G+ +ML+A KYEE+S P V D  +I D  YT+ ++++ME  +L +L++ +  PT   F+RR  + AQ D
Sbjct:   70 YIEDLHAYYRKIEY--LGCVSPTYMDE-QLDLNERMRAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKLQLVGLVAMLLACKYEEVSVPVVSDLIHIADRAYTRKDILEMEKLMLNTLQYNMSLPTAYVFMRRFLKAAQAD 217          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CG21_CANAL (G2/mitotic-specific cyclin CYB1 OS=Candida albicans GN=CYB1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.353e-26
Identity = 62/166 (37.35%), Postives = 103/166 (62.05%), Query Frame = 1
Query:  307 DIDARSDDPQIC-GAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            D+D   +D Q+    YV +I+ Y + +E   +  P P Y+ K Q  +   MR +LVDWLVE+  ++KL+ ++L+L ++ +DRF+S+ V+   KLQLL  +++  A+K EE+  P+V+++ Y TD +YT +EVV+ E  +L  L F+L  P    FLRR+++    D
Sbjct:  190 DLDEEDNDDQLMVSEYVNEIFSYYYELET--RMLPDPQYLFK-QTLLKPRMRSILVDWLVEMHLKFKLLPESLFLAVNVMDRFMSVEVVQIDKLQLLATAALFTAAKNEEVFSPSVKNYAYFTDGSYTPEEVVQAEKYMLTILNFDLNYPNPMNFLRRISKADDYD 352          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCN1_ANTMA (G2/mitotic-specific cyclin-1 OS=Antirrhinum majus PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.353e-26
Identity = 65/167 (38.92%), Postives = 105/167 (62.87%), Query Frame = 1
Query:  304 IDIDARSDDPQICGA-YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            +DIDA   +  +    YV D+Y++  S+E + +     DY+   Q +++  MR +L+DWLV+V  +++L  +TLYLTI+ +DR+L+     R++LQL+G+ +MLIASKYEEI  P V +   I+DNTY+  +++ ME  IL +L++ L  PT   FL R  + +  D
Sbjct:  178 VDIDAADVNNDLAVVEYVEDMYKFYKSVENESRPH---DYMGS-QPEINEKMRAILIDWLVQVHHKFELSPETLYLTINIVDRYLASETTIRRELQLVGIGAMLIASKYEEIWAPEVHELVCISDNTYSDKQILVMEKKILGALEWYLTVPTPYVFLVRFIKASMTD 340          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CG23_YEAST (G2/mitotic-specific cyclin-3 OS=Saccharomyces cerevisiae GN=CLB3 PE=1 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 3.073e-26
Identity = 57/143 (39.86%), Postives = 100/143 (69.93%), Query Frame = 1
Query:  358 DIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTR 786
            +I++Y+  +E     +P P Y++K Q ++  + R  L+DW+V+V E+++L+ +TLYL I+ IDR+L   V+   K QL+G +S+ IA+KYEEI+ P ++DF Y+++N Y++++++  E  IL  L+FELG P   +FLRR+++
Sbjct:  171 EIFEYMRKLE--DLYKPNPYYMDK-QPELRWSFRSTLIDWIVQVHEKFQLLPETLYLCINIIDRYLCKEVVPVNKFQLVGAASLFIAAKYEEINCPTIKDFVYMSENCYSRNDLLDAERTILNGLEFELGWPGPMSFLRRISK 310          
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCB13_ORYSJ (Cyclin-B1-3 OS=Oryza sativa subsp. japonica GN=CYCB1-3 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.073e-26
Identity = 68/166 (40.96%), Postives = 102/166 (61.45%), Query Frame = 1
Query:  307 DIDARSDDPQICGA-YVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801
            DIDA     ++    YV DIY++  + E     RPL  Y+   Q +++  MR +L DWL+EV     L+ +TLYLT+  ID++LSL  + R++LQL+GVS+MLIA KYEE   P V+DF  I+DN++++ +V+  E  IL  L++ L  PT+  F+ R  + A  D
Sbjct:  195 DIDASDSHNELAVVDYVEDIYRFYRNTE--NTYRPLCTYMVS-QTEINERMRAILTDWLIEVHYRLMLMPETLYLTVYIIDQYLSLENVPRKELQLVGVSAMLIACKYEETWAPLVKDFLVISDNSFSRQQVLSTEKSILNKLQWNLTVPTMYMFILRYLKAALGD 357          
The following BLAST results are available for this feature:
BLAST of CV884711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
CCNB3_HUMAN7.313e-2840.00G2/mitotic-specific cyclin-B3 OS=Homo sapiens GN=C... [more]
CCB11_ORYSJ1.629e-2741.14Cyclin-B1-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CG22_YEAST2.128e-2740.48G2/mitotic-specific cyclin-2 OS=Saccharomyces cere... [more]
CCNB2_SOYBN2.128e-2742.57G2/mitotic-specific cyclin S13-7 (Fragment) OS=Gly... [more]
CCNB2_MEDVA2.779e-2739.74G2/mitotic-specific cyclin-2 OS=Medicago varia PE=... [more]
CCNB2_MEDSA2.779e-2739.74G2/mitotic-specific cyclin-2 (Fragment) OS=Medicag... [more]
CG21_CANAL2.353e-2637.35G2/mitotic-specific cyclin CYB1 OS=Candida albican... [more]
CCN1_ANTMA2.353e-2638.92G2/mitotic-specific cyclin-1 OS=Antirrhinum majus ... [more]
CG23_YEAST3.073e-2639.86G2/mitotic-specific cyclin-3 OS=Saccharomyces cere... [more]
CCB13_ORYSJ3.073e-2640.96Cyclin-B1-3 OS=Oryza sativa subsp. japonica GN=CYC... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010B04_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884711 ID=CV884711; Name=CV884711; organism=Citrus sinensis; type=EST; length=801bp
CTCCTCCTCTCTTGAGTCCCAAATTGAGTGAACATTAGTTTGCTAATGGC
GGATCAAGAGAACTTTGTTAGGGTCACACGGGCAGCGGCCAAGAAGAGGG
CGGCCTCCGGAAGTGCCTTGGAGCAGCCGGCCAAAAAGAAGCGGGTGGTC
TTGGGGGAGTTGCCCACCAACACAAACGTCGTCGTCTCGGTGAATCCGAG
TCTCAAGGCTGAGCCGCGTAAAGCCAAGGCCAAAGCGAAGAAGGCTTTGC
TAACGGAAAAGACCAAGGCCAAGGCCAAGACCAAGGCAACCGAGTATGCT
GATATTGACATTGATGCCAGATCCGACGACCCTCAGATCTGTGGAGCCTA
CGTCACCGACATTTACCAGTATCTTCATTCCATGGAGGTGGATCCAAAGA
GAAGGCCTTTGCCTGATTACGTAGAGAAGGTTCAGAAGGATGTGAGTGCA
AACATGAGAGGGGTGTTGGTTGACTGGTTGGTGGAGGTTGCAGAGGAATA
CAAGCTTGTTTCAGACACCCTCTATCTCACCATTTCGTATATTGATAGGT
TCCTTTCTTTGAATGTTCTCAATCGCCAGAAGCTTCAGCTGCTTGGGGTT
TCTTCAATGCTCATTGCCTCAAAGTATGAGGAAATTAGCCCTCCAAATGT
GGAAGATTTTTGCTACATTACGGATAATACCTACACCAAAGACGAGGTGG
TGAAAATGGAGGCCGATATACTCAAGTCCTTGAAGTTTGAATTGGGAAGT
CCCACTGTCAAGACATTTTTGAGGCGATTAACCAGGGTTGCACAAGAGGA
T
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