EY679003
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_NEIMF (Formate--tetrahydrofolate ligase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=fhs PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.095e-16 Identity = 43/102 (42.16%), Postives = 56/102 (54.90%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337 GG G DL V A EN F Y +++SIK+KI IA+ YGA V++S EA +I G +PICMA TQYS S +A G P GF + +R + Sbjct: 414 GGVGGADLARKVVNAIENQPNNFNFSYDVELSIKDKIRAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGFRITVRGI 515 HSP 2 Score: 30.8018 bits (68), Expect = 2.095e-16 Identity = 15/24 (62.50%), Postives = 15/24 (62.50%), Query Frame = 3 Query: 345 SIGAGFIYPLVGTMSTMPGLPIRP 416 S GAGFI L G M MPGLP P Sbjct: 518 SSGAGFIVALCGNMMKMPGLPKVP 541
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_DESAH (Formate--tetrahydrofolate ligase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=fhs PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.719e-16 Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQI-EMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337 GG GA++ V ACE T+ KFLY LD+ +KE+I+ IA+ YGA GV+YS EA + + + L +CM T S S + + KG PTG+ L IR+V Sbjct: 446 GGDGAIEFAETVIEACEEETE-FKFLYELDMPLKERIELIAKEVYGADGVDYSNEANASLARIQADPELAKLGMCMVKTHLSLSDNPSLKGVPTGWRLMIREV 547 HSP 2 Score: 31.9574 bits (71), Expect = 2.719e-16 Identity = 14/26 (53.85%), Postives = 16/26 (61.54%), Query Frame = 3 Query: 351 GAGFIYPLVGTMSTMPGLPIRPCLLR 428 GAGFI P+ GT+S MPG P R Sbjct: 552 GAGFIVPVAGTISLMPGTGSNPAFKR 577
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_VIBVY (Formate--tetrahydrofolate ligase OS=Vibrio vulnificus (strain YJ016) GN=fhs PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.535e-16 Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKF--LYPLDVSIKEKIDTIA-RSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340 GGKG + V AC+ P F LY + +++EKI T+ + YG V++S+ A++Q+ +Y GF L +CMA T S S D++ KGAP+GF + +R+V+ Sbjct: 439 GGKGMEAVAREVIEACD---APANFRPLYRAEQTLEEKIITVCTKGYGCGEVQFSDTAKQQLALYQTLGFGELAVCMAKTPLSISSDSSLKGAPSGFTIMVREVR 540 HSP 2 Score: 35.4242 bits (80), Expect = 3.535e-16 Identity = 15/29 (51.72%), Postives = 18/29 (62.07%), Query Frame = 3 Query: 339 RASIGAGFIYPLVGTMSTMPGLPIRPCLL 425 R GAGF+Y L G + TMPGLP P + Sbjct: 540 RLCAGAGFVYALTGNVMTMPGLPDIPAFM 568
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_VIBVU (Formate--tetrahydrofolate ligase OS=Vibrio vulnificus GN=fhs PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 3.535e-16 Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKF--LYPLDVSIKEKIDTIA-RSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340 GGKG + V AC+ P F LY + +++EKI T+ + YG V++S+ A++Q+ +Y GF L +CMA T S S D++ KGAP+GF + +R+V+ Sbjct: 439 GGKGMEAVAREVIEACD---APANFRPLYRAEQTLEEKIITVCTKGYGCGEVQFSDTAKQQLALYQTLGFGELAVCMAKTPLSISSDSSLKGAPSGFTIMVREVR 540 HSP 2 Score: 35.4242 bits (80), Expect = 3.535e-16 Identity = 15/29 (51.72%), Postives = 18/29 (62.07%), Query Frame = 3 Query: 339 RASIGAGFIYPLVGTMSTMPGLPIRPCLL 425 R GAGF+Y L G + TMPGLP P + Sbjct: 540 RLCAGAGFVYALTGNVMTMPGLPDIPAFM 568
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_SHEWM (Formate--tetrahydrofolate ligase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=fhs PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.537e-16 Identity = 45/104 (43.27%), Postives = 56/104 (53.85%), Query Frame = 2 Query: 32 MGGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340 +G GA L V A E + + LY D SI+ K+ TIA S YGA GV S+EA+ Q+E G L +C+A T S SHD KG P GF LPI +K Sbjct: 426 LGANGAEALAHKVVEATEQDSD-FRLLYSSDASIEAKLLTIAESGYGARGVVLSDEAKAQLEQIKAMGLDNLAVCIAKTPLSISHDPLLKGVPQGFELPIAQLK 528 HSP 2 Score: 33.113 bits (74), Expect = 3.537e-16 Identity = 14/26 (53.85%), Postives = 19/26 (73.08%), Query Frame = 3 Query: 339 RASIGAGFIYPLVGTMSTMPGLPIRP 416 + + GAGFI LVG + TMPGL ++P Sbjct: 528 KINAGAGFITALVGKVMTMPGLGVKP 553
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_LISIN (Formate--tetrahydrofolate ligase OS=Listeria innocua GN=fhs PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.538e-16 Identity = 42/101 (41.58%), Postives = 58/101 (57.43%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIA-RSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRD 334 GG G ++L V A E+ + K +Y SI+EK++ I + YG GVE S +A+KQI + G+ PICMA TQYS S D G PT F++ IR+ Sbjct: 416 GGDGGLELADKVIAAVESGEEDYKRIYDDAWSIEEKLEAIVTKVYGGIGVELSSKAQKQIVEFKKYGWDRYPICMAKTQYSLSDDPTLLGRPTDFVIHIRE 516 HSP 2 Score: 34.2686 bits (77), Expect = 3.538e-16 Identity = 14/26 (53.85%), Postives = 18/26 (69.23%), Query Frame = 3 Query: 348 IGAGFIYPLVGTMSTMPGLPIRPCLL 425 +GAGF+ L G + TMPGLP +P L Sbjct: 521 LGAGFVVALTGDVMTMPGLPKKPAAL 546
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_NEIM0 (Formate--tetrahydrofolate ligase OS=Neisseria meningitidis serogroup C (strain 053442) GN=fhs PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.538e-16 Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337 GG G DL V A E+ T F Y +++ IK+KI IA+ YGA V++S EA +I G +PICMA TQYS S +A G P GF + +R + Sbjct: 414 GGAGGADLARKVVNAIESQTNNFGFAYDVELGIKDKIRAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGFRIAVRGI 515 HSP 2 Score: 31.187 bits (69), Expect = 3.538e-16 Identity = 15/24 (62.50%), Postives = 15/24 (62.50%), Query Frame = 3 Query: 345 SIGAGFIYPLVGTMSTMPGLPIRP 416 S GAGFI L G M MPGLP P Sbjct: 518 SAGAGFIVALCGNMMKMPGLPKVP 541
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_PEDPA (Formate--tetrahydrofolate ligase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=fhs PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.539e-16 Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337 GG G+ DL V + P+ LY + I++KI TI + YG S VEYS +A K+I+ G+ LPICMA +QYSFS D + GAP+ F++ + D+ Sbjct: 409 GGAGSKDLANEVIALADTNQGPMTKLYDNNGRIEDKIKTIVQKIYGGSDVEYSPQALKKIKECVANGWDHLPICMAKSQYSFSDDPKQLGAPSDFVMHVNDI 510 HSP 2 Score: 30.0314 bits (66), Expect = 3.539e-16 Identity = 13/26 (50.00%), Postives = 16/26 (61.54%), Query Frame = 3 Query: 348 IGAGFIYPLVGTMSTMPGLPIRPCLL 425 +GAGF+ G + TMPGLP P L Sbjct: 514 LGAGFLVVQTGKVLTMPGLPKHPAAL 539
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_ACICJ (Formate--tetrahydrofolate ligase OS=Acidiphilium cryptum (strain JF-5) GN=fhs PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.316e-16 Identity = 46/103 (44.66%), Postives = 61/103 (59.22%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIA-RSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340 G GA DL AV + LYP D+ + K+ TIA R YGA +E S A K++ + QG+ LP+C+A TQYSF+ D A +GAPTGF +PIRD + Sbjct: 413 GSAGATDLAQAVIETIAAKSARFAPLYPDDMKLPHKLRTIAQRIYGADDIELSPLAAKRLARFEAQGYDHLPVCVAKTQYSFTADPARRGAPTGFTVPIRDAR 515
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_DEHSC (Formate--tetrahydrofolate ligase OS=Dehalococcoides sp. (strain CBDB1) GN=fhs PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.592e-16 Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSG-LPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337 GG GA +L AV AC N FLYP ++ +K++I+TIAR YGA+GV Y+ A +++ G + +P CM T S SHD A KG P+GF LPIRD+ Sbjct: 452 GGDGATELAEAVTDAC-NEPNNFHFLYPENMPLKKRIETIARKVYGANGVSYTPIAMEKLARIESMGDTQFMPTCMVKTHLSLSHDPALKGRPSGFTLPIRDI 553 HSP 2 Score: 24.2534 bits (51), Expect = 4.592e-16 Identity = 9/23 (39.13%), Postives = 13/23 (56.52%), Query Frame = 3 Query: 348 IGAGFIYPLVGTMSTMPGLPIRP 416 +GAG + P+ G + MPG P Sbjct: 557 MGAGLVVPVAGDIKLMPGTSSDP 579 The following BLAST results are available for this feature:
BLAST of EY679003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679003 ID=EY679003; Name=EY679003; organism=Citrus sinensis; type=EST; length=876bpback to top |