EY679003 | Citrus Genome Database

Overview


Name	EY679003
Unique Name	EY679003
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	876

Libraries


Library Name	Type
Sweet orange leaf, infected with CiLV	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_BACC7 (Formate--tetrahydrofolate ligase OS=Bacillus cereus (strain AH187) GN=fhs PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.134e-24
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 2

Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            GG+G VDL   V +  E        LY L++ ++EKI TIA+  YGA  +E++ +A KQ+  Y G+G+S LPICMA TQYS S DA + G P+ FI+ IR++K
Sbjct:  418 GGQGGVDLAEKVLKEIEKGENNYAPLYELELPLEEKIRTIAQKVYGAKDIEFAPKARKQLAQYEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELK 520

HSP 2 Score: 40.817 bits (94), Expect = 6.134e-24
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 3

Query:  339 RASIGAGFIYPLVGTMSTMPGLPIRPCLLR 428
            + SIGAGFI  L GTM TMPGLP +P  L+
Sbjct:  520 KPSIGAGFIVALTGTMLTMPGLPKQPAALQ 549

BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_BACC3 (Formate--tetrahydrofolate ligase OS=Bacillus cereus (strain 03BB102) GN=fhs PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.134e-24
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 2

Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            GG+G VDL   V +  E        LY L++ ++EKI TIA+  YGA  +E++ +A KQ+  Y G+G+S LPICMA TQYS S DA + G P+ FI+ IR++K
Sbjct:  418 GGQGGVDLAEKVLKEIEKGENNYAPLYELELPLEEKIRTIAQKVYGAKDIEFAPKARKQLAQYEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELK 520

HSP 2 Score: 40.817 bits (94), Expect = 6.134e-24
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 3

Query:  339 RASIGAGFIYPLVGTMSTMPGLPIRPCLLR 428
            + SIGAGFI  L GTM TMPGLP +P  L+
Sbjct:  520 KPSIGAGFIVALTGTMLTMPGLPKQPAALQ 549

BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_BACC0 (Formate--tetrahydrofolate ligase OS=Bacillus cereus (strain AH820) GN=fhs PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.134e-24
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 2

Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            GG+G VDL   V +  E        LY L++ ++EKI TIA+  YGA  +E++ +A KQ+  Y G+G+S LPICMA TQYS S DA + G P+ FI+ IR++K
Sbjct:  418 GGQGGVDLAEKVLKEIEKGENNYAPLYELELPLEEKIRTIAQKVYGAKDIEFAPKARKQLAQYEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELK 520

HSP 2 Score: 40.817 bits (94), Expect = 6.134e-24
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 3

Query:  339 RASIGAGFIYPLVGTMSTMPGLPIRPCLLR 428
            + SIGAGFI  L GTM TMPGLP +P  L+
Sbjct:  520 KPSIGAGFIVALTGTMLTMPGLPKQPAALQ 549

BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_BACAN (Formate--tetrahydrofolate ligase OS=Bacillus anthracis GN=fhs PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.134e-24
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 2

Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            GG+G VDL   V +  E        LY L++ ++EKI TIA+  YGA  +E++ +A KQ+  Y G+G+S LPICMA TQYS S DA + G P+ FI+ IR++K
Sbjct:  418 GGQGGVDLAEKVLKEIEKGENNYAPLYELELPLEEKIRTIAQKVYGAKDIEFAPKARKQLAQYEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELK 520

HSP 2 Score: 40.817 bits (94), Expect = 6.134e-24
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 3

Query:  339 RASIGAGFIYPLVGTMSTMPGLPIRPCLLR 428
            + SIGAGFI  L GTM TMPGLP +P  L+
Sbjct:  520 KPSIGAGFIVALTGTMLTMPGLPKQPAALQ 549

BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_BACAH (Formate--tetrahydrofolate ligase OS=Bacillus thuringiensis (strain Al Hakam) GN=fhs PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.134e-24
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 2

Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            GG+G VDL   V +  E        LY L++ ++EKI TIA+  YGA  +E++ +A KQ+  Y G+G+S LPICMA TQYS S DA + G P+ FI+ IR++K
Sbjct:  418 GGQGGVDLAEKVLKEIEKGENNYAPLYELELPLEEKIRTIAQKVYGAKDIEFAPKARKQLAQYEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELK 520

HSP 2 Score: 40.817 bits (94), Expect = 6.134e-24
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 3

Query:  339 RASIGAGFIYPLVGTMSTMPGLPIRPCLLR 428
            + SIGAGFI  L GTM TMPGLP +P  L+
Sbjct:  520 KPSIGAGFIVALTGTMLTMPGLPKQPAALQ 549

BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_BACAC (Formate--tetrahydrofolate ligase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=fhs PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.134e-24
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 2

Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            GG+G VDL   V +  E        LY L++ ++EKI TIA+  YGA  +E++ +A KQ+  Y G+G+S LPICMA TQYS S DA + G P+ FI+ IR++K
Sbjct:  418 GGQGGVDLAEKVLKEIEKGENNYAPLYELELPLEEKIRTIAQKVYGAKDIEFAPKARKQLAQYEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELK 520

HSP 2 Score: 40.817 bits (94), Expect = 6.134e-24
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 3

Query:  339 RASIGAGFIYPLVGTMSTMPGLPIRPCLLR 428
            + SIGAGFI  L GTM TMPGLP +P  L+
Sbjct:  520 KPSIGAGFIVALTGTMLTMPGLPKQPAALQ 549

BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_BACAA (Formate--tetrahydrofolate ligase OS=Bacillus anthracis (strain A0248) GN=fhs PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.134e-24
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 2

Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            GG+G VDL   V +  E        LY L++ ++EKI TIA+  YGA  +E++ +A KQ+  Y G+G+S LPICMA TQYS S DA + G P+ FI+ IR++K
Sbjct:  418 GGQGGVDLAEKVLKEIEKGENNYAPLYELELPLEEKIRTIAQKVYGAKDIEFAPKARKQLAQYEGEGWSNLPICMAKTQYSLSDDATKLGRPSDFIVTIRELK 520

HSP 2 Score: 40.817 bits (94), Expect = 6.134e-24
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 3

Query:  339 RASIGAGFIYPLVGTMSTMPGLPIRPCLLR 428
            + SIGAGFI  L GTM TMPGLP +P  L+
Sbjct:  520 KPSIGAGFIVALTGTMLTMPGLPKQPAALQ 549

BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_BACC2 (Formate--tetrahydrofolate ligase OS=Bacillus cereus (strain G9842) GN=fhs PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.982e-24
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 2

Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            GG+G VDL   V +  E        LY L++ ++EKI TIA+  YGA  +E++ +A KQ+  Y G+G+S LP+CMA TQYS S DA + G P+ FI+ IR++K
Sbjct:  418 GGQGGVDLAEKVLKEIEKGENNYAPLYELELPLEEKIRTIAQKVYGAKDIEFAPKARKQLAQYEGEGWSNLPVCMAKTQYSLSDDATKLGRPSDFIVTIRELK 520

HSP 2 Score: 40.817 bits (94), Expect = 7.982e-24
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 3

Query:  339 RASIGAGFIYPLVGTMSTMPGLPIRPCLLR 428
            + SIGAGFI  L GTM TMPGLP +P  L+
Sbjct:  520 KPSIGAGFIVALTGTMLTMPGLPKQPAALQ 549

BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_BACC1 (Formate--tetrahydrofolate ligase OS=Bacillus cereus (strain ATCC 10987) GN=fhs PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.982e-24
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 2

Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            GG+G VDL   V +  E        LY L++ ++EKI TIA+  YGA  +E++ +A KQ+  Y G+G+S LP+CMA TQYS S DA + G P+ FI+ IR++K
Sbjct:  418 GGQGGVDLAEKVLKEIEKGENNYAPLYELELPLEEKIRTIAQKVYGAKDIEFAPKARKQLAQYEGEGWSNLPVCMAKTQYSLSDDATKLGRPSDFIVTIRELK 520

HSP 2 Score: 40.817 bits (94), Expect = 7.982e-24
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = 3

Query:  339 RASIGAGFIYPLVGTMSTMPGLPIRPCLLR 428
            + SIGAGFI  L GTM TMPGLP +P  L+
Sbjct:  520 KPSIGAGFIVALTGTMLTMPGLPKQPAALQ 549

BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: C1TM_SCHPO (C-1-tetrahydrofolate synthase, mitochondrial OS=Schizosaccharomyces pombe GN=ade9 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.268e-23
Identity = 46/104 (44.23%), Postives = 69/104 (66.35%), Query Frame = 2

Query:   35 GGKGAVDLGIAVQRACENVTQP-LKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            GGKGA++L  +V  AC+  +    + LY  + SI++K++ IA+  YGA+GVE+S  A+++I  +  QGF  LPICMA TQYS SH+   +  P  F +PIRD++
Sbjct:  824 GGKGAIELAKSVMTACDQSSNSKFRLLYDSETSIEDKVNVIAKEMYGANGVEFSSLAKERINTFIKQGFGNLPICMAKTQYSLSHNPEFRNVPKNFTVPIRDMR 927

HSP 2 Score: 37.7354 bits (86), Expect = 2.268e-23
Identity = 16/29 (55.17%), Postives = 19/29 (65.52%), Query Frame = 3

Query:  339 RASIGAGFIYPLVGTMSTMPGLPIRPCLL 425
            R + GAGFIYPL   + T+PGLP  P  L
Sbjct:  927 RLNAGAGFIYPLAAEIQTIPGLPTAPAYL 955

The following BLAST results are available for this feature:

BLAST of EY679003 vs. ExPASy Swiss-Prot

BLAST of EY679003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 293


Match Name	E-value	Identity	Description
FTHS_BACC7	6.134e-24	46.60	Formate--tetrahydrofolate ligase OS=Bacillus cereu...	[more]
FTHS_BACC3	6.134e-24	46.60	Formate--tetrahydrofolate ligase OS=Bacillus cereu...	[more]
FTHS_BACC0	6.134e-24	46.60	Formate--tetrahydrofolate ligase OS=Bacillus cereu...	[more]
FTHS_BACAN	6.134e-24	46.60	Formate--tetrahydrofolate ligase OS=Bacillus anthr...	[more]
FTHS_BACAH	6.134e-24	46.60	Formate--tetrahydrofolate ligase OS=Bacillus thuri...	[more]
FTHS_BACAC	6.134e-24	46.60	Formate--tetrahydrofolate ligase OS=Bacillus anthr...	[more]
FTHS_BACAA	6.134e-24	46.60	Formate--tetrahydrofolate ligase OS=Bacillus anthr...	[more]
FTHS_BACC2	7.982e-24	45.63	Formate--tetrahydrofolate ligase OS=Bacillus cereu...	[more]
FTHS_BACC1	7.982e-24	45.63	Formate--tetrahydrofolate ligase OS=Bacillus cereu...	[more]
C1TM_SCHPO	2.268e-23	44.23	C-1-tetrahydrofolate synthase, mitochondrial OS=Sc...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-401-053-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY679003 ID=EY679003; Name=EY679003; organism=Citrus sinensis; type=EST; length=876bp
GCCAGTTTAGTTTTCGTTCTCACCATCGCCCATGGGTGGAAAAGGAGCAG
TGGACCTTGGAATTGCAGTTCAAAGAGCCTGTGAGAATGTTACACAGCCA
TTGAAGTTCTTATATCCTTTAGATGTCAGTATTAAAGAGAAAATAGATAC
AATAGCAAGGTCATATGGTGCTAGCGGCGTTGAGTACTCAGAGGAGGCTG
AGAAACAGATCGAAATGTACACCGGGCAAGGGTTTTCTGGCTTACCAATT
TGCATGGCATAAACCCAGTATTCATTTTCACACGATGCCGCCGAGAAGGG
AGCCCCAACTGGGTTTATCTTACCGATAAGGGATGTAAAGAGCTAGCATT
GGGGCTGGATTCATTTATCCTTTGGTTGGAACAATGAGTACAATGCCAGG
TCTCCCAATAAGGCCATGCCTTTTAAGAGAATGGAGTCAACACTGCAACT
GGAAAGGTTGTTGGGGCTGTCTTAAGATCCCACAAAGCACTCCCGTGTGG
GTCCTCAAGAAGCTCTCCTTTAGATGTTCTTAAATGCTCCTGAGCAAACA
ATGAGCTTGAAGGGCTCCCCCCCCCCCCCACTGGCTGATATTCTAACCCC
GATCTGTAACACTTATGGGTACCTCGGGCTATTTGCTGTGGTAAACAAAA
CCCGACACCAAATAGAACCTGGAAAAAAAAAATCTTGGTACTCACCTTGC
GGACTTTAATTTTCCCTATTAATGTGTCCTTACTCCCATTTGATCTTGAA
TCCCGTTACGAAAATTTACCCTATGGGTGGGGGTGTGATATTTGTAAAAT
AAACAAAAAAAAAAAAAAAATAAAATAAAAGCAAAAGGGCGCGGGCGCGG
GTTAATAAATTATGAAAGGTATCAGA