EY679003

Overview
NameEY679003
Unique NameEY679003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_STRPN (Formate--tetrahydrofolate ligase OS=Streptococcus pneumoniae GN=fhs PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.386e-14
Identity = 39/102 (38.24%), Postives = 54/102 (52.94%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337
            G +G V L   V +         K LY  D+S++EKI+ I    Y  S V + ++A+ QI      G+  LPICMA TQYSFS +    GAP  F + IR++
Sbjct:  412 GAEGGVALAETVVKTIAENPANYKRLYDNDLSVQEKIEKIVTEIYRGSKVNFEKKAQTQIAQIVQNGWDKLPICMAKTQYSFSDNPNALGAPENFEITIREL 513          

HSP 2 Score: 35.8094 bits (81), Expect = 1.386e-14
Identity = 16/26 (61.54%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  348 IGAGFIYPLVGTMSTMPGLPIRPCLL 425
            +GAGFI  L G + TMPGLP RP  L
Sbjct:  517 LGAGFIVALTGDVMTMPGLPKRPAAL 542          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_STRP7 (Formate--tetrahydrofolate ligase OS=Streptococcus pneumoniae (strain 70585) GN=fhs PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.386e-14
Identity = 39/102 (38.24%), Postives = 54/102 (52.94%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337
            G +G V L   V +         K LY  D+S++EKI+ I    Y  S V + ++A+ QI      G+  LPICMA TQYSFS +    GAP  F + IR++
Sbjct:  412 GAEGGVALAETVVKTIAENPANYKRLYDNDLSVQEKIEKIVTEIYRGSKVNFEKKAQTQIAQIVQNGWDKLPICMAKTQYSFSDNPNALGAPENFEITIREL 513          

HSP 2 Score: 35.8094 bits (81), Expect = 1.386e-14
Identity = 16/26 (61.54%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  348 IGAGFIYPLVGTMSTMPGLPIRPCLL 425
            +GAGFI  L G + TMPGLP RP  L
Sbjct:  517 LGAGFIVALTGDVMTMPGLPKRPAAL 542          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_YERE8 (Formate--tetrahydrofolate ligase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fhs PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.798e-14
Identity = 37/98 (37.76%), Postives = 58/98 (59.18%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPI 328
            GG G   L   V  AC + + P+   YP + S+++KI+ +A+ YGA  V ++ +A +Q++  T  GF  LP+C+A T  S S DA+ K  P  F+LP+
Sbjct:  443 GGAGTTALAQRVIDACAHASPPV-LAYPDNASLEQKIEILAQRYGAREVTFTPQARQQLDSITAAGFGHLPLCIAKTPLSISADASLKNVPHDFVLPV 539          

HSP 2 Score: 27.335 bits (59), Expect = 1.798e-14
Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 3
Query:  345 SIGAGFIYPLVGTMSTMPGLPIRP 416
            S GAGF+    G + TMPGL  +P
Sbjct:  545 SAGAGFVRIYAGDIMTMPGLGTQP 568          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_RHOS5 (Formate--tetrahydrofolate ligase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=fhs PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.800e-14
Identity = 42/105 (40.00%), Postives = 58/105 (55.24%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKF--LYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            G  G  DL   V +  E    P  F  LYP ++ + EK++T+AR  Y A  V        Q+  +   G+  LP+CMA TQYSF+ DAA +GAP G  +PIR+V+
Sbjct:  414 GSAGIEDLARKVVQLAET---PSMFAPLYPDEMPLFEKMETVARRIYHAHDVIADHVIRDQLRAWEDAGYGALPVCMAKTQYSFTTDAAIRGAPEGHSVPIREVR 515          

HSP 2 Score: 33.113 bits (74), Expect = 1.800e-14
Identity = 14/26 (53.85%), Postives = 17/26 (65.38%), Query Frame = 3
Query:  339 RASIGAGFIYPLVGTMSTMPGLPIRP 416
            R S GAGF+  + G + TMPGLP  P
Sbjct:  515 RLSAGAGFVVAICGEIRTMPGLPREP 540          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_PORGI (Formate--tetrahydrofolate ligase OS=Porphyromonas gingivalis GN=fhs PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.800e-14
Identity = 43/103 (41.75%), Postives = 59/103 (57.28%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENV-TQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337
            GGKGA +L   V    EN  +QPLK+ Y  +  +K KI+ IA+  Y A  V YS +A+ +++    Q    LP+C+A TQYSFS D   KG   GF L + D+
Sbjct:  411 GGKGAEELAKLVVEMVENKPSQPLKYAYEPENPVKMKIEKIAKEIYSAGSVVYSSKADGKLKKIAMQSLDHLPVCIAKTQYSFSSDPKAKGDVRGFELKVSDI 513          

HSP 2 Score: 26.5646 bits (57), Expect = 1.800e-14
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 3
Query:  351 GAGFIYPLVGTMSTMPGLPIRP 416
            GAG +  ++G +  MPGLP  P
Sbjct:  518 GAGMLVVIIGEIMRMPGLPKEP 539          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_ELUMP (Formate--tetrahydrofolate ligase OS=Elusimicrobium minutum (strain Pei191) GN=fhs PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.800e-14
Identity = 35/103 (33.98%), Postives = 54/103 (52.43%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            GG+G + L   V           +F Y  + S++EK   I ++ YGA  V + ++A   I+ Y   GF  +P+CMA TQYSFS +    G P GF + +R+ +
Sbjct:  412 GGEGGIQLAKKVVDIISKNKSKFRFTYESEDSLEEKTKKIVKNIYGAKDVFFDKKALDSIKKYEAMGFGNIPVCMAKTQYSFSDNPKLYGRPEGFTIEVREAR 514          

HSP 2 Score: 33.113 bits (74), Expect = 1.800e-14
Identity = 15/26 (57.69%), Postives = 17/26 (65.38%), Query Frame = 3
Query:  339 RASIGAGFIYPLVGTMSTMPGLPIRP 416
            R S GAGF+  L G + TMPGLP  P
Sbjct:  514 RISAGAGFVVMLTGNIMTMPGLPKFP 539          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_HYPNA (Formate--tetrahydrofolate ligase OS=Hyphomonas neptunium (strain ATCC 15444) GN=fhs PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14
Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            GGKG  DL   V    E      K LYP D+ + EKI+T+A+S Y A  VE +     Q+  +   GF  LP+CMA TQYSFS D A  GAP G ++ +R+V+
Sbjct:  412 GGKGTEDLARGVTALIEKGEADFKPLYPDDMPLLEKIETVAKSIYRAGRVETTRAVRNQLAAWEKAGFGHLPVCMAKTQYSFSTDPALLGAPEGHVVRLREVR 514          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_CLOK5 (Formate--tetrahydrofolate ligase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=fhs PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.339e-14
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337
            GG+G +++   V R         +F Y   + I++KI  IA+  YGA GV ++ +AEK+I+     GF   P+C+A TQYS + D  + G P GF + +R V
Sbjct:  414 GGEGGIEVAKEVLRLINEGKNDFQFAYDEKLPIRDKIRAIAQKIYGADGVTFTNQAEKEIDELEKLGFGKTPVCIAKTQYSLTDDQNKLGRPKGFKITVRQV 515          

HSP 2 Score: 29.261 bits (64), Expect = 2.339e-14
Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 3
Query:  345 SIGAGFIYPLVGTMSTMPGLPIRP 416
            S GAGF+  + G++  MPGLP  P
Sbjct:  518 SAGAGFVVAITGSIMKMPGLPKVP 541          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_CLOK1 (Formate--tetrahydrofolate ligase OS=Clostridium kluyveri (strain NBRC 12016) GN=fhs PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.339e-14
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337
            GG+G +++   V R         +F Y   + I++KI  IA+  YGA GV ++ +AEK+I+     GF   P+C+A TQYS + D  + G P GF + +R V
Sbjct:  414 GGEGGIEVAKEVLRLINEGKNDFQFAYDEKLPIRDKIRAIAQKIYGADGVTFTNQAEKEIDELEKLGFGKTPVCIAKTQYSLTDDQNKLGRPKGFKITVRQV 515          

HSP 2 Score: 29.261 bits (64), Expect = 2.339e-14
Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 3
Query:  345 SIGAGFIYPLVGTMSTMPGLPIRP 416
            S GAGF+  + G++  MPGLP  P
Sbjct:  518 SAGAGFVVAITGSIMKMPGLPKVP 541          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_RHIEC (Formate--tetrahydrofolate ligase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=fhs PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 2.339e-14
Identity = 39/103 (37.86%), Postives = 57/103 (55.34%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIA-RSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            G  G  +L   V    E+     + LY  D+S+ EKI+ IA + Y A  V   +    Q++ +  QG+  LP+CMA TQYSFS D   +GAP G I+ +R+V+
Sbjct:  415 GSAGIEELAHKVVELAESGQAKFQPLYGDDISLFEKIEIIASKIYHAGEVTADKAVRDQLQSWEEQGYGKLPVCMAKTQYSFSTDPNLRGAPEGHIVSVREVR 517          

HSP 2 Score: 33.113 bits (74), Expect = 2.339e-14
Identity = 14/26 (53.85%), Postives = 17/26 (65.38%), Query Frame = 3
Query:  339 RASIGAGFIYPLVGTMSTMPGLPIRP 416
            R S GAGF+  + G + TMPGLP  P
Sbjct:  517 RLSAGAGFVVAITGEIMTMPGLPKSP 542          
The following BLAST results are available for this feature:
BLAST of EY679003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 293
Match NameE-valueIdentityDescription
FTHS_STRPN1.386e-1438.24Formate--tetrahydrofolate ligase OS=Streptococcus ... [more]
FTHS_STRP71.386e-1438.24Formate--tetrahydrofolate ligase OS=Streptococcus ... [more]
FTHS_YERE81.798e-1437.76Formate--tetrahydrofolate ligase OS=Yersinia enter... [more]
FTHS_RHOS51.800e-1440.00Formate--tetrahydrofolate ligase OS=Rhodobacter sp... [more]
FTHS_PORGI1.800e-1441.75Formate--tetrahydrofolate ligase OS=Porphyromonas ... [more]
FTHS_ELUMP1.800e-1433.98Formate--tetrahydrofolate ligase OS=Elusimicrobium... [more]
FTHS_HYPNA1.813e-1443.69Formate--tetrahydrofolate ligase OS=Hyphomonas nep... [more]
FTHS_CLOK52.339e-1436.27Formate--tetrahydrofolate ligase OS=Clostridium kl... [more]
FTHS_CLOK12.339e-1436.27Formate--tetrahydrofolate ligase OS=Clostridium kl... [more]
FTHS_RHIEC2.339e-1437.86Formate--tetrahydrofolate ligase OS=Rhizobium etli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-053-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679003 ID=EY679003; Name=EY679003; organism=Citrus sinensis; type=EST; length=876bp
GCCAGTTTAGTTTTCGTTCTCACCATCGCCCATGGGTGGAAAAGGAGCAG
TGGACCTTGGAATTGCAGTTCAAAGAGCCTGTGAGAATGTTACACAGCCA
TTGAAGTTCTTATATCCTTTAGATGTCAGTATTAAAGAGAAAATAGATAC
AATAGCAAGGTCATATGGTGCTAGCGGCGTTGAGTACTCAGAGGAGGCTG
AGAAACAGATCGAAATGTACACCGGGCAAGGGTTTTCTGGCTTACCAATT
TGCATGGCATAAACCCAGTATTCATTTTCACACGATGCCGCCGAGAAGGG
AGCCCCAACTGGGTTTATCTTACCGATAAGGGATGTAAAGAGCTAGCATT
GGGGCTGGATTCATTTATCCTTTGGTTGGAACAATGAGTACAATGCCAGG
TCTCCCAATAAGGCCATGCCTTTTAAGAGAATGGAGTCAACACTGCAACT
GGAAAGGTTGTTGGGGCTGTCTTAAGATCCCACAAAGCACTCCCGTGTGG
GTCCTCAAGAAGCTCTCCTTTAGATGTTCTTAAATGCTCCTGAGCAAACA
ATGAGCTTGAAGGGCTCCCCCCCCCCCCCACTGGCTGATATTCTAACCCC
GATCTGTAACACTTATGGGTACCTCGGGCTATTTGCTGTGGTAAACAAAA
CCCGACACCAAATAGAACCTGGAAAAAAAAAATCTTGGTACTCACCTTGC
GGACTTTAATTTTCCCTATTAATGTGTCCTTACTCCCATTTGATCTTGAA
TCCCGTTACGAAAATTTACCCTATGGGTGGGGGTGTGATATTTGTAAAAT
AAACAAAAAAAAAAAAAAAATAAAATAAAAGCAAAAGGGCGCGGGCGCGG
GTTAATAAATTATGAAAGGTATCAGA
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